Factsheet for Solyc02g090510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026076	Potato	cytosol	98.35	93.14
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	46.46	87.85
Solyc02g065070.2.1	Tomato	cytosol	83.86	86.13
Solyc06g008830.1.1	Tomato	cytosol	13.84	82.35
CDY65016	Canola	cytosol	78.42	80.13
Os07t0619800-02	Rice	cytosol, plasma membrane	59.8	80.13
CDY69753	Canola	cytosol, plastid	70.18	79.78
Bra036089.1-P	Field mustard	cytosol	77.92	79.63
CDY52824	Canola	cytosol	77.92	79.63
TraesCS2D01G173100.1	Wheat	cytosol	62.27	79.41
Solyc08g062990.1.1	Tomato	cytosol	18.45	78.87
CDY65651	Canola	cytosol	75.95	78.8
KRH57894	Soybean	cytosol, plastid	74.14	77.85
Solyc05g041110.1.1	Tomato	nucleus	14.33	77.68
Solyc10g050080.1.1	Tomato	cytosol	18.12	77.46
Solyc01g108400.2.1	Tomato	cytosol	74.14	76.53
GSMUA_Achr1P21380_001	Banana	cytosol	76.28	76.28
Solyc04g049100.1.1	Tomato	cytosol	17.79	76.06
KRH28502	Soybean	cytosol, mitochondrion	71.0	75.88
AT3G50530.2	Thale cress	plastid	78.91	75.79
Zm00001d000221_P001	Maize	cytosol	14.17	75.44
KRH76957	Soybean	plastid	74.96	75.33
GSMUA_Achr2P07660_001	Banana	cytosol	73.48	73.48
Zm00001d006885_P002	Maize	cytosol	68.04	71.95
EER99712	Sorghum	cytosol	70.84	71.55
Solyc10g061860.1.1	Tomato	cytosol	16.47	71.43
TraesCS2B01G191800.1	Wheat	cytosol	70.18	70.53
TraesCS2A01G165800.1	Wheat	cytosol, plastid	70.02	70.48
Solyc10g078390.1.1	Tomato	cytosol	66.39	70.21
Zm00001d022166_P001	Maize	cytosol	61.94	65.62
Solyc01g096350.2.1	Tomato	cytosol, nucleus	58.65	60.44
Solyc03g082500.2.1	Tomato	nucleus	59.47	60.37
HORVU2Hr1G030520.1	Barley	cytosol	42.83	52.53
Solyc02g083850.2.1	Tomato	plastid	41.35	44.04
Solyc03g033540.2.1	Tomato	extracellular	40.53	43.54
Solyc10g079130.1.1	Tomato	nucleus	34.43	39.81
Solyc12g005030.1.1	Tomato	cytosol	23.56	39.72
Solyc01g008440.2.1	Tomato	cytosol	34.1	38.84
Solyc03g113390.2.1	Tomato	cytosol	34.1	38.48
Solyc11g065660.1.1	Tomato	cytosol	33.44	38.09
Solyc06g073350.2.1	Tomato	plastid	33.61	38.06
VIT_00s0577g00010.t01	Wine grape	plasma membrane	33.77	37.96
Solyc09g005550.2.1	Tomato	cytosol	30.64	35.16

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556
GO:GO:0046777	InterPro:IPR000719	UniProt:K4BCK0	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g090510.2	EnsemblPlants:Solyc02g090510.2.1
UniParc:UPI000276924C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:52051018..52056258

Molecular Weight (calculated)

67927.2 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.401

Length

607 amino acids

Sequence
(BLAST)

001: MGACTSRPSN YAGDSNGNRA TLPVKSTPNN NEDGNSHQQE RTKKDEADVG KKSPFFPFYS PSPAHYLFSK KSPLRSPANA STNSTPRRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNESA IPEVNETEVG GGGGGGAGLD KSFGFSKNFG NKYELGEEVG RGHFGYTCKA KFRKGEVKGQ EVAVKVIPKS KMTTAIAIED
201: VRREVKILRA LTGHSNLVKF YDSYEDHTNV YIVMELCEGG ELLDRILSRG GKYSEDDAKT VMIQILKVVA FCHLQGVVHR DLKPENFLFT SKEENAQLKA
301: IDFGLSDFVK PDERLNDIVG SAYYVAPEVL HRSYSTEADV WSIGVIAYIL LCGSRPFWAR TESGIFRSVL KADPSFEEQP WPTLSSEAKD FVKRLLNKDP
401: RKRMTAAQAL GHPWIKNSHN IEVPLDILIF KLMKAYMRSS ALRKAALRAL SKTLTVDELF YLKEQFALLQ PSKNGTISFD HVKTVLMKHA TDAMKEARIH
501: DFLASLNALQ YRRMDFEEFC AAALSVHQLE AFDRWEQHAR CAYEIFEKEG NRAIMIEELA SELGLSPSVP VHAVLHDWLR HTDGKLSFLG FAKLLHGVSS
601: RSIAKVQ

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.