Factsheet for PGSC0003DMT400026076

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g090510.2.1	Tomato	nucleus	93.14	98.35
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	43.99	87.85
PGSC0003DMT400001990	Potato	cytosol	79.88	86.78
Os07t0619800-02	Rice	cytosol, plasma membrane	56.94	80.57
CDY65016	Canola	cytosol	74.57	80.47
CDY69753	Canola	cytosol, plastid	66.77	80.15
Bra036089.1-P	Field mustard	cytosol	74.1	79.97
CDY52824	Canola	cytosol	74.1	79.97
TraesCS2D01G173100.1	Wheat	cytosol	58.97	79.41
CDY65651	Canola	cytosol	72.23	79.15
KRH57894	Soybean	cytosol, plastid	70.2	77.85
GSMUA_Achr1P21380_001	Banana	cytosol	72.39	76.44
PGSC0003DMT400066365	Potato	cytosol	70.05	76.36
AT3G50530.2	Thale cress	plastid	74.88	75.95
KRH28502	Soybean	cytosol, mitochondrion	67.24	75.88
Zm00001d000221_P001	Maize	cytosol	13.42	75.44
KRH76957	Soybean	plastid	70.98	75.33
GSMUA_Achr2P07660_001	Banana	cytosol	69.73	73.64
Zm00001d006885_P002	Maize	cytosol	64.74	72.3
EER99712	Sorghum	cytosol	67.39	71.88
PGSC0003DMT400021598	Potato	mitochondrion	63.34	70.73
TraesCS2B01G191800.1	Wheat	cytosol	66.46	70.53
TraesCS2A01G165800.1	Wheat	cytosol, plastid	66.3	70.48
Zm00001d022166_P001	Maize	cytosol	58.66	65.62
PGSC0003DMT400008340	Potato	cytosol	56.32	60.37
HORVU2Hr1G030520.1	Barley	cytosol	40.25	52.12
PGSC0003DMT400009177	Potato	plastid	39.16	44.5
PGSC0003DMT400058126	Potato	plastid	39.0	44.01
PGSC0003DMT400021055	Potato	cytosol	32.92	40.27
PGSC0003DMT400069175	Potato	plastid	32.14	38.43
VIT_00s0577g00010.t01	Wine grape	plasma membrane	32.14	38.15
PGSC0003DMT400083474	Potato	cytosol	31.51	37.97
PGSC0003DMT400027809	Potato	cytosol	31.51	37.9
PGSC0003DMT400034291	Potato	cytosol	31.67	37.73

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102588824	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	UniProt:M1AMM3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400010059	PGSC:PGSC0003DMG400010059	EnsemblPlants:PGSC0003DMT400026076
ScanProsite:PS00107	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF47473	SUPFAM:SSF56112	UniParc:UPI0002959957	SEG:seg	:

Description

Calcium/calmodulin-dependent protein kinase CaMK3 [Source:PGSC_GENE;Acc:PGSC0003DMG400010059]

Coordinates

chr2:-:44247179..44251987

Molecular Weight (calculated)

71613.6 Da

IEP (calculated)

9.418

GRAVY (calculated)

-0.358

Length

641 amino acids

Sequence
(BLAST)

001: MGACTSRPSN YSDDSITVAG NRATLPVKAT PNNNEDGNSH QQERTKKDEA DVGKKSPFFP FYSPSPAHYL FSKKSPLRSP ANASSNSTPR RFFKRPFPPP
101: SPAKHIRAVL ARRHGSVKPN ESAIPEVNET EVGGGGGGGA GLDKSFGFSK NFGNKYELGE EVGRGHFGYT CKAKFKKGEV KGQEVAVKVI PKSKMTTAIA
201: IEDVRREVKI LRALTGHSNL VKFYDSYEDH TNVYIVMELC EGGELLDRIL SRGGKYSEDD AKTVMIQILK VVAFCHLQGV VHRDLKPELA SDREAQMFSR
301: GILLWLNPSL VREAMSSVSN FLFTSKEENA QLKAIDFGLS DFVKPDERLN DIVGSAYYVA PEVLHRSYST EADVWSIGVI AYILLCGSRP FWARTESGIF
401: RSVLKADPSF EEQPWPTLSS EAKDFVKRLL NKDPRKRMTA AQALGHAWIK NSHNIEVPLD ILIFKLMKAY MRSSALRKAA LRALSKTLTV DELFYLKEQF
501: ALLQPSKNGT ISFDNVKTAL MKHATDAMKE ARIHDFLASL NALQYRRMDF EEFCAAALSV HQLEAFDRWE QHARCAYEIF EKEGNRAIMI EELASELGLS
601: PSVPVHAVLH DWLRHTDGKL SFLGFAKLLH GVSSRSITKV Q

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.