Factsheet for PGSC0003DMT400001990

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065070.2.1	Tomato	cytosol	97.8	97.63
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	48.14	88.47
Os07t0619800-02	Rice	cytosol, plasma membrane	61.53	80.13
PGSC0003DMT400026076	Potato	cytosol	86.78	79.88
TraesCS2D01G173100.1	Wheat	cytosol	63.73	78.99
CDY69753	Canola	cytosol, plastid	71.19	78.65
KRH57894	Soybean	cytosol, plastid	76.95	78.55
CDY65651	Canola	cytosol	77.12	77.78
KRH28502	Soybean	cytosol, mitochondrion	74.75	77.64
Bra036089.1-P	Field mustard	cytosol	77.97	77.44
CDY65016	Canola	cytosol	77.97	77.44
CDY52824	Canola	cytosol	77.97	77.44
PGSC0003DMT400066365	Potato	cytosol	76.78	77.04
KRH76957	Soybean	plastid	77.8	75.99
GSMUA_Achr1P21380_001	Banana	cytosol	78.14	75.95
GSMUA_Achr2P07660_001	Banana	cytosol	75.93	73.81
AT3G50530.2	Thale cress	plastid	78.98	73.73
Zm00001d000221_P001	Maize	cytosol	14.24	73.68
Zm00001d006885_P002	Maize	cytosol	69.32	71.25
EER99712	Sorghum	cytosol	72.37	71.05
TraesCS2B01G191800.1	Wheat	cytosol	72.54	70.86
TraesCS2A01G165800.1	Wheat	cytosol, plastid	72.37	70.81
PGSC0003DMT400021598	Potato	mitochondrion	68.47	70.38
Zm00001d022166_P001	Maize	cytosol	62.88	64.75
PGSC0003DMT400008340	Potato	cytosol	62.54	61.71
HORVU2Hr1G030520.1	Barley	cytosol	43.39	51.72
PGSC0003DMT400009177	Potato	plastid	43.39	45.39
PGSC0003DMT400058126	Potato	plastid	42.71	44.37
PGSC0003DMT400021055	Potato	cytosol	35.93	40.46
PGSC0003DMT400027809	Potato	cytosol	34.92	38.65
PGSC0003DMT400083474	Potato	cytosol	34.75	38.53
PGSC0003DMT400069175	Potato	plastid	34.92	38.43
VIT_00s0577g00010.t01	Wine grape	plasma membrane	34.92	38.15
PGSC0003DMT400034291	Potato	cytosol	34.41	37.73

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102592392	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	UniProt:M0ZJG1	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400000754	PGSC:PGSC0003DMG400000754	EnsemblPlants:PGSC0003DMT400001990
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF115
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029497CB	RefSeq:XP_006360222.1	SEG:seg	:	:	:

Description

Calcium/calmodulin-dependent protein kinase CaMK3 [Source:PGSC_GENE;Acc:PGSC0003DMG400000754]

Coordinates

chr2:-:23675189..23681226

Molecular Weight (calculated)

66116.3 Da

IEP (calculated)

8.720

GRAVY (calculated)

-0.354

Length

590 amino acids

Sequence
(BLAST)

001: MGGCTSKPSP EPNYSNNDLY APDGTAIPAK ANNEDNSLEN KSKEGAEVGK KSPFFPFYSP SPAHYFFSKK SPANSTPRRF FKRPFPPPSP AKHIRAVLAR
101: RHGSVKPNAI PEGNELEGGG GLDKSFGFSK NFGNKYELGE EVGRGHFGYT CKAKFKKGEL KGQEVAVKVI PKAKMSTTIA IEDVRREVKI LRALTGHENL
201: VKFYDAYEDH ENVYIVMELC EGGELLDRIL LRGGKYTEDD ARAVLTQILK VVAFCHLQGV VHRDLKPENF LFMSKDENAQ LKAIDFGLSD FVKPDERLND
301: IVGSAYYVAP EVLHRSYSTE ADVWSIGVIS YILLCGSRPF WARTESGIFR AVLKADPGFE EQPWPTLSSE AKDFVKRLLN KDPRKRMTAA QALGHPWIKN
401: SHDVEVPLDI LIFKLMKTYM RSSALRKAAL RALSKTLTVD ELVHLKQQFA LLEPNKNGTI NLDNIKAALM KYATDAMKEA RIHDFIASLN ALQYRRMDFE
501: EFCAAALSVY QLEALDQWEQ HARCAYEIFE KDGNRAIVIE ELASELGLGP SVPVHAVLLD WIRHTDGKLS FLGFAKLLHG VSSRSITKIQ

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.