Factsheet for PGSC0003DMT400008340

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082500.2.1	Tomato	nucleus	98.5	98.5
VIT_16s0098g01140.t01	Wine grape	cytosol	72.58	73.31
KRH64343	Soybean	cytosol	72.91	73.03
GSMUA_Achr7P05810_001	Banana	cytosol	66.56	72.76
KRH53593	Soybean	cytosol	72.41	72.29
GSMUA_Achr3P12500_001	Banana	cytosol	62.71	69.44
GSMUA_Achr9P20900_001	Banana	cytosol	62.88	69.24
Zm00001d036416_P001	Maize	plasma membrane	70.23	69.08
GSMUA_Achr2P03380_001	Banana	cytosol	61.71	68.59
Os06t0714200-01	Rice	plasma membrane	70.57	67.74
GSMUA_AchrUn_...	Banana	cytosol	60.7	67.72
KXG20873	Sorghum	cytosol	70.74	67.68
GSMUA_Achr1P04170_001	Banana	cytosol	61.54	67.65
Bra036512.1-P	Field mustard	cytosol	64.72	66.72
HORVU7Hr1G091360.1	Barley	cytosol	69.4	66.61
TraesCS7A01G384500.1	Wheat	cytosol	69.23	66.56
TraesCS7B01G287100.1	Wheat	cytosol	69.23	66.56
TraesCS7D01G380900.1	Wheat	cytosol	69.23	66.56
CDX87128	Canola	cytosol	64.55	66.55
CDY19836	Canola	cytosol	64.55	66.55
AT5G24430.1	Thale cress	cytosol	65.38	65.82
Bra017989.1-P	Field mustard	cytosol	64.55	65.31
CDX88104	Canola	cytosol	63.55	65.18
AT3G49370.1	Thale cress	cytosol	64.55	64.98
CDY08129	Canola	cytosol	64.38	64.71
CDX80445	Canola	cytosol	63.04	64.67
Bra009765.1-P	Field mustard	cytosol	61.2	64.32
Zm00001d014773_P001	Maize	cytosol	59.2	64.25
CDY05930	Canola	cytosol	64.21	64.21
TraesCS1D01G176900.1	Wheat	cytosol	67.56	64.13
TraesCS1B01G201900.1	Wheat	cytosol	67.56	64.13
TraesCS1A01G178400.1	Wheat	cytosol	67.56	64.13
HORVU1Hr1G047350.2	Barley	cytosol	67.22	64.11
KXG38195	Sorghum	cytosol	67.89	63.34
PGSC0003DMT400001990	Potato	cytosol	61.71	62.54
Zm00001d032473_P001	Maize	cytosol	57.02	61.44
PGSC0003DMT400066365	Potato	cytosol	59.7	60.71
CDX86978	Canola	cytosol	65.05	59.94
Bra019593.1-P	Field mustard	cytosol	65.22	59.91
CDY00200	Canola	cytosol	65.38	59.88
Zm00001d013868_P001	Maize	cytosol	52.17	58.87
PGSC0003DMT400021598	Potato	mitochondrion	56.35	58.71
PGSC0003DMT400026076	Potato	cytosol	60.37	56.32
Os10t0510700-00	Rice	plasma membrane	68.06	55.75
CDX87112	Canola	cytosol	25.92	53.45
PGSC0003DMT400009177	Potato	plastid	40.64	43.09
PGSC0003DMT400058126	Potato	plastid	40.47	42.61
PGSC0003DMT400021055	Potato	cytosol	32.44	37.02
PGSC0003DMT400083474	Potato	cytosol	32.78	36.84
PGSC0003DMT400027809	Potato	cytosol	32.44	36.4
PGSC0003DMT400034291	Potato	cytosol	31.1	34.57
PGSC0003DMT400069175	Potato	plastid	30.1	33.58
TraesCS4A01G458300.1	Wheat	cytosol	62.37	22.76

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102581410	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZUF4	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG400003213	PGSC:PGSC0003DMG400003213	EnsemblPlants:PGSC0003DMT400008340	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF186	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029681C9	RefSeq:XP_006347491.1	SEG:seg	:

Description

Serine/threonine protein kinase pk23 [Source:PGSC_GENE;Acc:PGSC0003DMG400003213]

Coordinates

chr3:+:47676589..47685400

Molecular Weight (calculated)

66714.9 Da

IEP (calculated)

9.002

GRAVY (calculated)

-0.358

Length

598 amino acids

Sequence
(BLAST)

001: MGQCCSKGVS GDNGGSVVAV GDGNSAVSTN NRPKPPPSPV RQSVGNGMSY TNNSTPAHSF TASPFQSPYP AGIAPSPSPV GTPRRKFKWP FPPPSPAKPI
101: LSAIFKRQGG TSVKPKEGPI PEDEGGEGEG QLDKSFGYPQ NLTSKYELGK EVGRGHFGHT CWAKGKKGEL KNQPVAVKII SKAKMTTAIS IEDVRREVKI
201: LKALSGHQNL VKFYDAFEDA NNVYIVMELC EGGELLDRIL SRGGRYTEED AKSIVVQILN VVAFCHLQGV VHRDLKPENF LFAKKDEDSP MKVIDFGLSD
301: FIKPDQRLND IVGSAYYVAP EVLHRSYSIE ADMWSIGVIT YILLCGSRPF WARTESGIFR SVLRADPNFE DSPWPAVSAE ARDFVKRLLN KDHRKRMTAS
401: QALTHPWLRT ENPFIPLDIL IFKLVKTYIR TSPLKRAALK ALSKALTEEE LIYLKAQFNL LEPKAGSVSL DNFRMALMKQ TTDAMREARV LDIINLLEPL
501: SYKQMEFEEF CAAAISTYQL EALENWEHIA SAAFNYFEQE GNRVISIEEL AQEMNLGPTA YAFLKDWIRP SDRKLSFLGY TKFLHGVTMR SSSTRHHR

Best Arabidopsis Sequence Match ( AT5G24430.1 )
(BLAST)

001: MGHCYSRNIS AVEDDEIPTG NGEVSNQPSQ NHRHASIPQS PVASGTPEVN SYNISPFQSP LPAGVAPSPA RTPGRKFKWP FPPPSPAKPI MAALRRRRGA
101: PPQPRDEPIP EDSEDVVDHG GDSGGGERLD KNFGFGKNFE GKYELGKEVG RGHFGHTCWA KAKKGKMKNQ TVAVKIISKA KMTSTLSIED VRREVKLLKA
201: LSGHRHMVKF YDVYEDADNV FVVMELCEGG ELLDRILARG GRYPEVDAKR ILVQILSATA FFHLQGVVHR DLKPENFLFT SRNEDAILKV IDFGLSDFIR
301: YDQRLNDVVG SAYYVAPEVL HRSYSTEADM WSIGVISYIL LCGSRPFYGR TESAIFRCVL RANPNFEDMP WPSISPTAKD FVKRLLNKDH RKRMTAAQAL
401: AHPWLRDENP GLLLDFSVYK LVKSYIRASP FRRSALKALS KAIPDEELVF LKAQFMLLDP KDGGLSLNCF TMALTRYATD AMMESRLPDI LNTMQPLAQK
501: KLDFEEFCAA AVSVYQLEAL EEWEQIATSA FEHFEHEGNR IISVQELAGE MSVGPSAYPL LKDWIRSSDG KLSFLGYAKF LHGVTVRSSS SRPR

Arabidopsis Description

CRK4CDPK-related kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.