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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017989.1-P Field mustard cytosol 98.82 99.49
CDY05930 Canola cytosol 97.98 97.49
AT3G49370.1 Thale cress cytosol 88.4 88.55
CDY00200 Canola cytosol 93.28 84.99
CDX86978 Canola cytosol 92.61 84.9
CDX87128 Canola cytosol 82.18 84.31
CDY19836 Canola cytosol 82.18 84.31
CDX88104 Canola cytosol 80.34 81.99
CDX80445 Canola cytosol 80.17 81.82
KRH64343 Soybean cytosol 68.74 68.51
KRH53593 Soybean cytosol 68.91 68.45
CDX87112 Canola cytosol 32.44 66.55
Solyc03g082500.2.1 Tomato nucleus 65.38 65.05
PGSC0003DMT400008340 Potato cytosol 64.71 64.38
VIT_16s0098g01140.t01 Wine grape cytosol 63.7 64.02
GSMUA_Achr9P20900_001 Banana cytosol 57.65 63.17
GSMUA_Achr7P05810_001 Banana cytosol 57.65 62.71
GSMUA_Achr3P12500_001 Banana cytosol 56.13 61.85
Zm00001d036416_P001 Maize plasma membrane 62.86 61.51
GSMUA_Achr2P03380_001 Banana cytosol 55.46 61.34
GSMUA_AchrUn_... Banana cytosol 54.96 61.01
GSMUA_Achr1P04170_001 Banana cytosol 55.63 60.85
KXG20873 Sorghum cytosol 63.87 60.8
CDY27530 Canola cytosol 60.67 60.57
CDY48019 Canola cytosol 60.67 60.57
Os06t0714200-01 Rice plasma membrane 63.36 60.51
HORVU7Hr1G091360.1 Barley cytosol 62.86 60.03
TraesCS7A01G384500.1 Wheat cytosol 62.69 59.97
TraesCS7B01G287100.1 Wheat cytosol 62.69 59.97
TraesCS7D01G380900.1 Wheat cytosol 62.69 59.97
CDY69753 Canola cytosol, plastid 51.76 57.68
Zm00001d014773_P001 Maize cytosol 53.28 57.53
CDY35427 Canola cytosol 54.62 57.32
HORVU1Hr1G047350.2 Barley cytosol 60.17 57.1
CDY65651 Canola cytosol 56.13 57.09
CDY22505 Canola cytosol 54.45 57.04
CDY65016 Canola cytosol 56.81 56.9
TraesCS1B01G201900.1 Wheat cytosol 60.17 56.83
TraesCS1D01G176900.1 Wheat cytosol 60.17 56.83
CDY52824 Canola cytosol 56.64 56.73
CDX79956 Canola cytosol 54.96 56.67
TraesCS1A01G178400.1 Wheat cytosol 60.0 56.67
KXG38195 Sorghum cytosol 60.67 56.32
CDY23873 Canola cytosol 54.45 56.06
CDX82311 Canola cytosol 54.62 54.9
Zm00001d032473_P001 Maize cytosol 51.09 54.77
CDY47375 Canola cytosol, nucleus, plasma membrane 52.77 54.7
CDX95464 Canola cytosol, plastid 54.29 54.56
CDY22990 Canola cytosol 54.45 54.55
CDX76010 Canola cytosol 51.93 54.21
CDY18568 Canola cytosol, plastid 54.12 54.21
CDX92303 Canola cytosol 54.29 54.19
CDX77233 Canola cytosol, plastid 53.61 53.98
CDX99267 Canola cytosol 53.95 53.86
CDY16510 Canola cytosol, plastid 53.78 53.69
CDY57585 Canola cytosol, mitochondrion 36.97 53.14
Zm00001d013868_P001 Maize cytosol 45.88 51.51
Os10t0510700-00 Rice plasma membrane 61.34 50.0
CDY06943 Canola cytosol 38.49 49.14
CDY30782 Canola plastid 35.8 40.73
CDY45213 Canola plastid 36.3 40.68
CDY18593 Canola plastid 36.64 40.45
CDX81407 Canola plastid 36.47 40.11
CDX72575 Canola cytosol 36.13 39.74
CDY47052 Canola cytosol 35.97 39.56
CDY38141 Canola cytosol, plastid 37.65 39.02
CDY63401 Canola cytosol, plastid 37.48 38.72
CDY29208 Canola plastid 37.65 38.49
CDY07808 Canola plastid 37.31 38.01
CDY40640 Canola cytosol 12.77 33.93
CDY48773 Canola cytosol 26.89 33.76
CDX92529 Canola cytosol 30.25 33.71
CDY42266 Canola cytosol 30.08 33.52
CDY14001 Canola cytosol 29.75 33.4
CDY44918 Canola cytosol 29.92 33.33
CDY53966 Canola cytosol 29.24 32.71
CDY16652 Canola cytosol 25.88 32.7
CDX67695 Canola cytosol 29.24 32.46
CDX97205 Canola cytosol 29.08 32.34
CDX72022 Canola cytosol 29.24 32.22
CDX95303 Canola cytosol 28.57 32.2
CDY23165 Canola cytosol 28.57 32.2
CDY06098 Canola cytosol 29.24 32.16
CDY33817 Canola cytosol 29.08 32.16
CDX73684 Canola cytosol 28.4 32.01
CDX81903 Canola cytosol, plastid 29.08 31.86
CDX78044 Canola cytosol, nucleus, plasma membrane 28.24 31.82
CDY21691 Canola cytosol, plastid 29.24 31.81
CDY29049 Canola cytosol 28.07 31.63
CDX90631 Canola cytosol 28.07 31.57
CDX79906 Canola cytosol 28.07 31.39
CDY10809 Canola cytosol 28.07 31.1
CDY34489 Canola cytosol 28.07 31.04
CDX84782 Canola cytosol, plastid 28.4 30.73
CDY23939 Canola cytosol, plastid 28.4 30.73
CDY45391 Canola cytosol 28.07 30.59
CDX73108 Canola cytosol 27.9 30.35
CDY14793 Canola cytosol 24.87 30.33
CDY19084 Canola plastid 28.57 30.04
CDY06900 Canola cytosol 26.72 29.94
CDY15391 Canola plastid 28.91 29.66
CDY26714 Canola cytosol 29.08 28.41
CDY10803 Canola cytosol 21.18 28.31
CDY19259 Canola cytosol, plastid 28.91 28.06
CDY71104 Canola cytosol 6.55 27.86
CDY24762 Canola cytosol 8.07 21.24
TraesCS4A01G458300.1 Wheat cytosol 56.81 20.62
CDX94570 Canola cytosol 25.38 20.35
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078F520UniProt:A0A078F520
EnsemblPlants:CDY08129ProteinID:CDY08129ProteinID:CDY08129.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00125419001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF186InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE5108SEG:seg:
Description
BnaA06g15970DBnaA06g15970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F520]
Coordinates
chrLK031983:-:565941..569072
Molecular Weight (calculated)
66347.4 Da
IEP (calculated)
8.703
GRAVY (calculated)
-0.305
Length
595 amino acids
Sequence
(BLAST)
001: MGHCYSRNIS TVEDKDGDVP NGVAQLQNNH RTSVPSSPVA SGSTEANPYT ISPFQSPLPA GVAPSPARTP GRKFKWPFPP PSPAKPILAA LRRRRGTAPQ
101: PRDGPIPEES EEDDHGTAGG SGERLDKNFG FSKHFEGKYE LGKEVGRGHF GHTCSAKAKK GKIKGQTVAV KIIAKAKMTS ALSIEDVRRE VKLLKALSGH
201: RHMVKFYDVF EDADNVFLVM ELCEGGELLD RILARGGRFP EADAKRILVQ VLSATAFFHL QGVVHRDLKP ENFLFTSKNE DAVLKVIDFG LSDFSRFGSD
301: LYQRLNDVVG SAYYVAPEVL HRSYGTEADI WSIGVISYIL LCGSRPFYGR TESAIFRCVL RANPNFEDMP WPSISPIAKD FVRRLLNKDH RKRMTAAQAL
401: AHPWLRGENP GLLLDFSIYK LVKSYIRASP FRRAALKSLS KAIPEEELVF LKAQFMLLEP EDGGLFLHNF TTALTRYATD AMIESRLPDI LNLLQPLAHR
501: KLDFEEFCAA AVSVYQLEAL EEWEQIATTA FEDFEREGSR AISVQELAEE MSLGPNAHPL LTDWIRSLDG KLSFLGYKKF LHGVTVRSSS SRPIR
Best Arabidopsis Sequence Match ( AT3G49370.1 )
(BLAST)
001: MGHCYSRNIS TVDDDDEIPS ATAQLPHRSH QNHHQTSSSS SIPQSPATSE VNPYNISPFQ SPLPAGVAPS PARTPGRKFK WPFPPPSPAK PIMAALRRRR
101: GTAPHPRDGP IPEDSEAGGS GGGIGERLDK NFGFAKNFEG KYELGREVGR GHFGHTCWAK AKKGKIKGQT VAVKIISKSK MTSALSIEDV RREVKLLKAL
201: SGHSHMVKFY DVFEDSDNVF VVMELCEGGE LLDSILARGG RYPEAEAKRI LVQILSATAF FHLQGVVHRD LKPENFLFTS KNEDAVLKVI DFGLSDYARF
301: DQRLNDVVGS AYYVAPEVLH RSYSTEADIW SIGVISYILL CGSRPFYGRT ESAIFRCVLR ANPNFDDLPW PSISPIAKDF VKRLLNKDHR KRMTAAQALA
401: HPWLRDENPG LLLDFSIYKL VKSYIRASPF RRAALKSLSK AIPEEELVFL KAQFMLLEPE DGGLHLHNFT TALTRYATDA MIESRLPDIL NMMQPLAHKK
501: LDFEEFCAAS VSVYQLEALE EWEQIATVAF EHFESEGSRA ISVQELAEEM SLGPNAYPLL KDWIRSLDGK LNFLGYAKFL HGVTVRSSSS RPMR
Arabidopsis Description
CRK6CDPK-related kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG12]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.