CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45213	Canola	plastid	98.09	96.61
Bra012058.1-P	Field mustard	plastid	97.71	96.23
CDY71104	Canola	cytosol	24.86	92.86
AT5G66210.1	Thale cress	plastid	90.25	90.25
CDY18593	Canola	plastid	92.35	89.61
CDX81407	Canola	plastid	91.97	88.91
KRH08079	Soybean	plastid	78.78	78.03
GSMUA_Achr2P00480_001	Banana	cytosol	43.59	77.29
KRH69782	Soybean	plastid	77.44	76.42
GSMUA_Achr1P08900_001	Banana	plastid	77.25	75.37
KRH76656	Soybean	plastid	80.69	75.09
Os07t0409900-01	Rice	plasma membrane	73.42	75.0
Zm00001d005164_P001	Maize	cytosol	73.42	75.0
KRH28800	Soybean	plastid	80.5	74.91
TraesCS2D01G245700.1	Wheat	cytosol	72.66	74.66
EER98402	Sorghum	cytosol	72.85	74.12
TraesCS2A01G239900.1	Wheat	cytosol	72.08	74.07
VIT_04s0023g03420.t01	Wine grape	plastid	78.39	73.48
Solyc03g033540.2.1	Tomato	extracellular	79.35	73.45
PGSC0003DMT400058126	Potato	plastid	79.35	73.06
TraesCS6A01G089400.2	Wheat	cytosol	70.94	72.6
TraesCS6B01G111800.1	Wheat	cytosol	70.94	72.6
TraesCSU01G016900.1	Wheat	cytosol	70.94	72.46
Os02t0126400-01	Rice	cytosol	72.08	72.22
Zm00001d015100_P002	Maize	plastid	72.08	72.22
PGSC0003DMT400009177	Potato	plastid	77.82	72.16
KXG29360	Sorghum	plastid	72.08	71.81
GSMUA_Achr8P19290_001	Banana	cytosol	72.08	71.27
HORVU6Hr1G014700.6	Barley	cytosol, mitochondrion, plastid	71.13	70.99
HORVU4Hr1G078080.2	Barley	cytosol	35.95	70.94
Solyc02g083850.2.1	Tomato	plastid	77.25	70.88
CDX72575	Canola	cytosol	72.66	70.24
CDY47052	Canola	cytosol	72.28	69.87
CDY38141	Canola	cytosol, plastid	76.48	69.69
CDY29208	Canola	plastid	77.44	69.59
CDY63401	Canola	cytosol, plastid	76.29	69.27
CDY07808	Canola	plastid	77.25	69.18
GSMUA_Achr5P18720_001	Banana	plastid	71.89	66.31
CDY69753	Canola	cytosol, plastid	44.36	43.45
CDY57585	Canola	cytosol, mitochondrion	33.27	42.03
CDY22505	Canola	cytosol	44.74	41.2
CDY65651	Canola	cytosol	46.08	41.2
CDY35427	Canola	cytosol	44.36	40.92
CDY52824	Canola	cytosol	46.46	40.91
CDY65016	Canola	cytosol	46.46	40.91
CDY23873	Canola	cytosol	44.93	40.66
CDX77233	Canola	cytosol, plastid	45.89	40.61
CDY16510	Canola	cytosol, plastid	46.08	40.44
CDX79956	Canola	cytosol	44.55	40.38
CDX76010	Canola	cytosol	43.59	40.0
CDY47375	Canola	cytosol, nucleus, plasma membrane	43.79	39.9
CDX95464	Canola	cytosol, plastid	44.74	39.53
CDY22990	Canola	cytosol	44.74	39.39
CDY06943	Canola	cytosol	34.99	39.27
CDX82311	Canola	cytosol	44.17	39.02
CDX92303	Canola	cytosol	44.17	38.76
CDX99267	Canola	cytosol	44.17	38.76
CDY18568	Canola	cytosol, plastid	43.98	38.72
CDY48773	Canola	cytosol	34.42	37.97
CDY27530	Canola	cytosol	42.45	37.25
CDX87128	Canola	cytosol	41.3	37.24
CDY48019	Canola	cytosol	42.26	37.08
CDY19836	Canola	cytosol	41.11	37.07
CDX88104	Canola	cytosol	41.3	37.05
CDY23165	Canola	cytosol	37.09	36.74
CDY29049	Canola	cytosol	37.09	36.74
CDY40640	Canola	cytosol	15.68	36.61
CDX73684	Canola	cytosol	36.9	36.55
CDX87112	Canola	cytosol	20.27	36.55
CDX90631	Canola	cytosol	36.9	36.48
CDY53966	Canola	cytosol	37.09	36.47
CDX78044	Canola	cytosol, nucleus, plasma membrane	36.71	36.36
CDX95303	Canola	cytosol	36.71	36.36
CDY42266	Canola	cytosol	36.9	36.14
CDY45391	Canola	cytosol	37.67	36.08
CDY14001	Canola	cytosol	36.52	36.04
CDX73108	Canola	cytosol	37.67	36.01
CDX92529	Canola	cytosol	36.71	35.96
CDY44918	Canola	cytosol	36.71	35.96
CDX97205	Canola	cytosol	36.71	35.89
CDX80445	Canola	cytosol	39.96	35.85
CDY08129	Canola	cytosol	40.73	35.8
CDY05930	Canola	cytosol	40.73	35.62
CDX79906	Canola	cytosol	36.14	35.53
CDX67695	Canola	cytosol	36.14	35.26
CDY16652	Canola	cytosol	31.74	35.24
CDY10809	Canola	cytosol	36.14	35.2
CDX72022	Canola	cytosol	36.33	35.19
CDY33817	Canola	cytosol	36.14	35.13
CDY21691	Canola	cytosol, plastid	36.71	35.1
CDX81903	Canola	cytosol, plastid	36.33	34.99
CDY34489	Canola	cytosol	35.76	34.76
CDY06098	Canola	cytosol	35.95	34.75
CDY06900	Canola	cytosol	35.18	34.65
CDY14793	Canola	cytosol	32.31	34.63
CDX84782	Canola	cytosol, plastid	35.56	33.82
CDY23939	Canola	cytosol, plastid	35.56	33.82
CDY19084	Canola	plastid	35.95	33.22
CDY15391	Canola	plastid	36.33	32.76
CDX86978	Canola	cytosol	40.54	32.67
CDY00200	Canola	cytosol	40.54	32.47
CDY10803	Canola	cytosol	26.2	30.79
CDY26714	Canola	cytosol	35.76	30.71
CDY19259	Canola	cytosol, plastid	35.95	30.67
CDY24762	Canola	cytosol	11.85	27.43
CDX94570	Canola	cytosol	31.55	22.24

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078GZW4	UniProt:A0A078GZW4
EnsemblPlants:CDY30782	ProteinID:CDY30782	ProteinID:CDY30782.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00046212001	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	PFAM:PF13833	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF246	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEDE5B	SEG:seg	:	:	:	:

Description

BnaC07g16820DBnaC07g16820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZW4]

Coordinates

chrLK032260:+:365349..368758

Molecular Weight (calculated)

59113.3 Da

IEP (calculated)

9.167

GRAVY (calculated)

-0.510

Length

523 amino acids

Sequence
(BLAST)

001: MGVCFSAIRV TGASSSRQTN NNNNKAHKKG CKKPPENKPS TTTTTTTNAK RRATGSVPCG KRTDFGYAKD FHEQYTIGKL LGHGQFGYTY VAIDKSNGDR
101: VAVKRLDKSK MVLPIAVEDV KREVEILKAL SGHENVVQFY NAFDDDDYVY IVMELCEGGE LLDRILSKKD SRYSEKDAAV VVRQMLKVAG ECHLHGLVHR
201: DMKPENFLFK STQLESPLKA TDFGLSDFIK PGKRFHDIVG SAYYVAPEVL KRRSGPESDV WSIGVITYIL LCGRRPFWDR TEDGIFKEVL RNKPDFRRKP
301: WSTISDSAKD FVKKLLVKDP RARLTAAQAL SHAWVREGGN ATDIPVDISV LNNLRQFVRY SRLKQFALRA LASTLDEAEI SDLRDQFDAI DALAKDLPWK
401: LKDSRVAEIL QAIDSNTDGL VDFTEFVAAA LHVHQLEEHD SEKWQLRSRA AFEKFDIDKD GYITPEELRM HTGLRGSIDP LLDEADIDRD GKISLHEFRR
501: LLRTASISSQ RVVSPAGRHR NPR

Best Arabidopsis Sequence Match ( AT5G66210.2 )
(BLAST)

001: MGVCFSAIRV TGASSSRRSS QTKSKAAPTP IDTKASTKRR TGSIPCGKRT DFGYSKDFHD HYTIGKLLGH GQFGYTYVAI HRPNGDRVAV KRLDKSKMVL
101: PIAVEDVKRE VQILIALSGH ENVVQFHNAF EDDDYVYIVM ELCEGGELLD RILSKKGNRY SEKDAAVVVR QMLKVAGECH LHGLVHRDMK PENFLFKSAQ
201: LDSPLKATDF GLSDFIKPGK RFHDIVGSAY YVAPEVLKRR SGPESDVWSI GVITYILLCG RRPFWDRTED GIFKEVLRNK PDFSRKPWAT ISDSAKDFVK
301: KLLVKDPRAR LTAAQALSHA WVREGGNATD IPVDISVLNN LRQFVRYSRL KQFALRALAS TLDEAEISDL RDQFDAIDVD KNGVISLEEM RQALAKDLPW
401: KLKDSRVAEI LEAIDSNTDG LVDFTEFVAA ALHVHQLEEH DSEKWQLRSR AAFEKFDLDK DGYITPEELR MHTGLRGSID PLLDEADIDR DGKISLHEFR
501: RLLRTASISS QRAPSPAGHR NLR

Arabidopsis Description

CPK28Calcium-dependent protein kinase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKW4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.