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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033476.1-P Field mustard cytosol 99.24 99.24
CDX95303 Canola cytosol 98.67 98.67
CDX73684 Canola cytosol 97.16 97.16
CDX78044 Canola cytosol, nucleus, plasma membrane 97.16 97.16
CDY29049 Canola cytosol 96.97 96.97
AT3G51850.1 Thale cress cytosol 96.78 96.78
CDX90631 Canola cytosol 96.59 96.41
VIT_08s0105g00390.t01 Wine grape cytosol 87.69 87.86
Solyc09g005550.2.1 Tomato cytosol 86.55 86.39
KRH00256 Soybean cytosol 78.22 86.04
KRH49392 Soybean cytosol 85.98 85.18
EES19672 Sorghum cytosol 82.01 79.74
GSMUA_Achr5P29340_001 Banana cytosol 79.73 79.73
GSMUA_AchrUn_... Banana cytosol 78.03 79.69
Zm00001d010579_P001 Maize cytosol, mitochondrion 81.44 79.48
GSMUA_Achr8P02740_001 Banana cytosol 77.84 79.34
HORVU1Hr1G071060.1 Barley endoplasmic reticulum, plasma membrane 50.76 79.29
Zm00001d012457_P003 Maize cytosol 79.73 78.54
TraesCS3D01G345500.1 Wheat cytosol 80.3 78.08
TraesCS3B01G383800.1 Wheat cytosol 80.11 78.04
EES01704 Sorghum cytosol 80.11 77.61
Os05t0467000-01 Rice cytosol, plasma membrane 80.3 77.51
TraesCS3A01G351300.1 Wheat cytosol 80.11 77.33
Os01t0832300-00 Rice cytosol, plasma membrane 80.68 77.31
HORVU3Hr1G087600.1 Barley cytosol, plastid 77.84 77.26
TraesCS1D01G290700.1 Wheat cytosol 79.36 76.32
TraesCS1A01G292200.1 Wheat cytosol 79.55 76.22
TraesCS1B01G301600.1 Wheat cytosol 79.17 76.14
GSMUA_Achr4P18940_001 Banana cytosol 69.51 68.86
CDY44918 Canola cytosol 68.18 67.42
CDY42266 Canola cytosol 67.99 67.23
CDY14001 Canola cytosol 67.42 67.17
CDY53966 Canola cytosol 67.61 67.11
CDX81903 Canola cytosol, plastid 68.37 66.48
CDX97205 Canola cytosol 67.05 66.17
CDX92529 Canola cytosol 66.86 66.1
CDY21691 Canola cytosol, plastid 68.37 66.0
CDY45391 Canola cytosol 67.61 65.38
CDX73108 Canola cytosol 67.61 65.27
HORVU1Hr1G070840.3 Barley cytosol 29.36 64.58
CDY14793 Canola cytosol 58.52 63.32
CDY33817 Canola cytosol 64.39 63.2
CDX67695 Canola cytosol 64.02 63.06
CDX79906 Canola cytosol 63.26 62.78
CDY06098 Canola cytosol 64.2 62.66
CDY06900 Canola cytosol 62.5 62.15
CDX72022 Canola cytosol 63.45 62.04
CDY48773 Canola cytosol 55.68 62.03
CDY19259 Canola cytosol, plastid 67.99 58.56
CDY26714 Canola cytosol 67.42 58.46
CDY10809 Canola cytosol 58.14 57.17
CDY34489 Canola cytosol 57.95 56.88
CDX84782 Canola cytosol, plastid 58.52 56.18
CDY23939 Canola cytosol, plastid 58.52 56.18
CDY19084 Canola plastid 58.9 54.95
CDY15391 Canola plastid 58.52 53.28
CDY40640 Canola cytosol 21.02 49.55
CDY16652 Canola cytosol 43.75 49.04
CDY10803 Canola cytosol 34.47 40.9
CDY24762 Canola cytosol 16.86 39.38
CDY18593 Canola plastid 38.07 37.29
CDY45213 Canola plastid 37.5 37.29
CDY30782 Canola plastid 36.74 37.09
CDX81407 Canola plastid 37.88 36.97
CDY47052 Canola cytosol 36.36 35.49
CDY38141 Canola cytosol, plastid 38.45 35.37
CDY57585 Canola cytosol, mitochondrion 27.65 35.27
CDY63401 Canola cytosol, plastid 38.45 35.24
Zm00001d038409_P001 Maize cytosol, nucleus, peroxisome 80.68 35.06
CDX72575 Canola cytosol 35.8 34.94
CDY29208 Canola plastid 38.26 34.71
CDY07808 Canola plastid 38.26 34.59
CDY69753 Canola cytosol, plastid 34.47 34.08
CDY22505 Canola cytosol 35.23 32.75
CDY35427 Canola cytosol 35.04 32.63
CDY23873 Canola cytosol 35.04 32.01
CDY06943 Canola cytosol 28.22 31.97
CDX76010 Canola cytosol 34.28 31.75
CDX79956 Canola cytosol 34.66 31.72
CDY47375 Canola cytosol, nucleus, plasma membrane 34.47 31.71
CDX94570 Canola cytosol 43.94 31.27
CDY65651 Canola cytosol 34.28 30.94
CDY22990 Canola cytosol 34.47 30.64
CDX95464 Canola cytosol, plastid 34.28 30.57
CDY16510 Canola cytosol, plastid 34.47 30.54
CDY27530 Canola cytosol 34.47 30.54
CDY48019 Canola cytosol 34.47 30.54
CDY18568 Canola cytosol, plastid 34.28 30.47
CDY65016 Canola cytosol 34.28 30.47
CDX77233 Canola cytosol, plastid 34.09 30.46
CDX82311 Canola cytosol 34.09 30.41
CDX92303 Canola cytosol 34.28 30.37
CDX99267 Canola cytosol 34.28 30.37
CDY52824 Canola cytosol 34.09 30.3
CDX87128 Canola cytosol 32.77 29.83
CDX87112 Canola cytosol 16.29 29.66
CDY19836 Canola cytosol 32.58 29.66
CDX88104 Canola cytosol 32.58 29.5
CDX80445 Canola cytosol 32.01 28.99
CDY05930 Canola cytosol 32.39 28.6
CDY08129 Canola cytosol 32.2 28.57
CDY71104 Canola cytosol 7.2 27.14
CDX86978 Canola cytosol 32.2 26.19
CDY00200 Canola cytosol 32.39 26.19
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20GO:A0A078G9R1UniProt:A0A078G9R1
EnsemblPlants:CDY23165ProteinID:CDY23165ProteinID:CDY23165.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005509
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00021696001InterPro:IPR000719InterPro:IPR002048
InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF194InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF2FC3
Description
BnaA04g05940DBnaA04g05940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9R1]
Coordinates
chrLK032141:+:77580..81061
Molecular Weight (calculated)
59561.5 Da
IEP (calculated)
7.108
GRAVY (calculated)
-0.420
Length
528 amino acids
Sequence
(BLAST)
001: MGNCCRSPAA VAREDVKSNY SGRDHHRKDA SGGKKLAPIR VLSEVPKENI EERYLLDREL GRGEFGVTYL CIERSTRDLL ACKSISKRKL RTAVDIEDVK
101: REVAIMKHLP KSSSIVTLKE ACEDDNAVHL VMELCEGGEL FDRIVARGHY TERAAAGVTK TIVEVVQLCH KHGVIHRDLK PENFLFANKK ENSPLKAIDF
201: GLSIFFKPGE KFSEIVGSPY YMAPEVLKRS YGPEIDIWSA GVILYILLCG VPPFWAESEQ GVAQAILRGI IDFKREPWPN ISETAKNLVR QMLEPDPKRR
301: LTAKQVLEHP WIQNAKKAPN VPLGDVVKSR LKQFSVMNRF KRKALRVIAE FLSSQEVEDI KEMFNKMDTD KDGIVTIQEL KAGLRDFGTQ LAESEVQMLI
401: EAVDTKGKGT LDYGEFVAVS LHLQKVANDE HLRKAFSYFD KDGNGYILPQ ELCEALKEDG GDDCVDVAND IFQEVDTDKD GRISYEEFAA MMKTGTDWRK
501: ASRHYSRGRF NSLSIKLMKD GSLNLGNE
Best Arabidopsis Sequence Match ( AT3G51850.1 )
(BLAST)
001: MGNCCRSPAA VAREDVKSNY SGHDHARKDA AGGKKSAPIR VLSDVPKENI EDRYLLDREL GRGEFGVTYL CIERSSRDLL ACKSISKRKL RTAVDIEDVK
101: REVAIMKHLP KSSSIVTLKE ACEDDNAVHL VMELCEGGEL FDRIVARGHY TERAAAGVTK TIVEVVQLCH KHGVIHRDLK PENFLFANKK ENSPLKAIDF
201: GLSIFFKPGE KFSEIVGSPY YMAPEVLKRN YGPEIDIWSA GVILYILLCG VPPFWAESEQ GVAQAILRGV IDFKREPWPN ISETAKNLVR QMLEPDPKRR
301: LTAKQVLEHP WIQNAKKAPN VPLGDVVKSR LKQFSVMNRF KRKALRVIAE FLSTEEVEDI KVMFNKMDTD NDGIVSIEEL KAGLRDFSTQ LAESEVQMLI
401: EAVDTKGKGT LDYGEFVAVS LHLQKVANDE HLRKAFSYFD KDGNGYILPQ ELCDALKEDG GDDCVDVAND IFQEVDTDKD GRISYEEFAA MMKTGTDWRK
501: ASRHYSRGRF NSLSIKLMKD GSLNLGNE
Arabidopsis Description
CPK13CPK13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEY4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.