CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18890.1	CDX73678	AT3G51920.1	17360592
AT1G18890.1	CDX95314	AT3G51920.1	17360592
AT1G18890.1	CDY23174	AT3G51920.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031055.1-P	Field mustard	cytosol, plastid	96.87	99.06
CDY21691	Canola	cytosol, plastid	99.63	98.9
AT1G18890.1	Thale cress	cytosol, plastid	90.79	90.46
CDY45391	Canola	cytosol	85.45	84.98
CDX73108	Canola	cytosol	85.45	84.83
VIT_17s0000g05520.t01	Wine grape	cytosol	66.48	83.76
CDY19259	Canola	cytosol, plastid	94.29	83.52
CDY26714	Canola	cytosol	92.63	82.59
KRH54494	Soybean	cytosol	81.77	80.58
KRH63420	Soybean	cytosol	82.32	80.4
PGSC0003DMT400034291	Potato	cytosol	79.37	80.11
Solyc03g113390.2.1	Tomato	cytosol	79.19	79.93
GSMUA_Achr2P17730_001	Banana	cytosol	58.56	78.91
KRH03406	Soybean	cytosol	78.08	78.37
KRH56973	Soybean	cytosol	77.53	78.11
CDX73684	Canola	cytosol	66.67	68.56
CDX78044	Canola	cytosol, nucleus, plasma membrane	66.48	68.37
CDY29049	Canola	cytosol	66.48	68.37
CDY23165	Canola	cytosol	66.48	68.37
CDX90631	Canola	cytosol	66.48	68.24
CDX95303	Canola	cytosol	66.3	68.18
CDY44918	Canola	cytosol	64.46	65.54
CDY42266	Canola	cytosol	64.46	65.54
CDX92529	Canola	cytosol	63.9	64.98
CDY14001	Canola	cytosol	63.35	64.91
CDY53966	Canola	cytosol	63.54	64.85
TraesCS4D01G027600.1	Wheat	plastid	67.59	64.39
CDX97205	Canola	cytosol	63.17	64.11
Os03t0688300-01	Rice	plasma membrane	67.77	64.11
TraesCS4A01G283400.1	Wheat	plastid	67.03	63.97
Zm00001d013527_P002	Maize	cytosol, plastid	67.96	63.08
CDX67695	Canola	cytosol	62.25	63.06
EER93646	Sorghum	plastid	67.96	62.97
CDY33817	Canola	cytosol	62.06	62.64
CDY06098	Canola	cytosol	61.88	62.11
CDX72022	Canola	cytosol	61.33	61.67
CDY06900	Canola	cytosol	59.85	61.21
CDY48773	Canola	cytosol	53.41	61.18
CDY14793	Canola	cytosol	54.88	61.07
CDX79906	Canola	cytosol	59.67	60.9
TraesCS4B01G030100.1	Wheat	plastid	67.22	60.83
HORVU4Hr1G004540.20	Barley	plastid	66.67	60.13
CDY10809	Canola	cytosol	54.7	55.31
CDY34489	Canola	cytosol	54.51	55.02
CDX84782	Canola	cytosol, plastid	54.7	54.0
CDY23939	Canola	cytosol, plastid	54.7	54.0
CDY19084	Canola	plastid	55.8	53.53
CDY15391	Canola	plastid	55.43	51.9
CDY40640	Canola	cytosol	19.71	47.77
CDY16652	Canola	cytosol	40.52	46.71
CDY10803	Canola	cytosol	32.41	39.55
CDY24762	Canola	cytosol	16.02	38.5
CDY18593	Canola	plastid	36.46	36.73
CDX81407	Canola	plastid	36.46	36.6
CDY38141	Canola	cytosol, plastid	38.67	36.59
CDY45213	Canola	plastid	35.73	36.53
CDY30782	Canola	plastid	34.99	36.33
CDY63401	Canola	cytosol, plastid	38.31	36.11
CDX72575	Canola	cytosol	35.54	35.67
CDY47052	Canola	cytosol	35.17	35.3
CDY57585	Canola	cytosol, mitochondrion	26.89	35.27
CDY29208	Canola	plastid	37.38	34.88
CDY07808	Canola	plastid	37.38	34.76
CDY69753	Canola	cytosol, plastid	34.07	34.64
CDY06943	Canola	cytosol	28.36	33.05
CDY35427	Canola	cytosol	34.44	32.98
CDY22505	Canola	cytosol	34.44	32.92
CDX79956	Canola	cytosol	34.25	32.24
CDY23873	Canola	cytosol	34.25	32.18
CDY65651	Canola	cytosol	34.62	32.14
CDY65016	Canola	cytosol	34.81	31.82
CDY52824	Canola	cytosol	34.62	31.65
CDX82311	Canola	cytosol	34.44	31.59
CDX76010	Canola	cytosol	33.15	31.58
CDY47375	Canola	cytosol, nucleus, plasma membrane	33.33	31.53
CDX95464	Canola	cytosol, plastid	34.25	31.42
CDY18568	Canola	cytosol, plastid	34.25	31.31
CDY22990	Canola	cytosol	34.25	31.31
CDX99267	Canola	cytosol	34.25	31.21
CDX92303	Canola	cytosol	34.25	31.21
CDX77233	Canola	cytosol, plastid	33.7	30.96
CDY16510	Canola	cytosol, plastid	33.89	30.87
CDX94570	Canola	cytosol	41.25	30.19
CDX87128	Canola	cytosol	32.04	30.0
CDX87112	Canola	cytosol	16.02	30.0
CDY48019	Canola	cytosol	32.78	29.87
CDY27530	Canola	cytosol	32.78	29.87
CDY19836	Canola	cytosol	31.86	29.83
CDX88104	Canola	cytosol	31.86	29.67
CDY05930	Canola	cytosol	32.04	29.1
CDY08129	Canola	cytosol	31.86	29.08
CDX80445	Canola	cytosol	31.12	28.99
CDY00200	Canola	cytosol	31.86	26.49
CDX86978	Canola	cytosol	31.49	26.35
CDY71104	Canola	cytosol	6.26	24.29

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	MapMan:25.1.2.1	Gene3D:3.30.200.20	EnsemblPlants:CDX81903
ProteinID:CDX81903	ProteinID:CDX81903.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00136862001	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF167	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001B33DE5
GO:X2C3K3	UniProt:X2C3K3	:	:	:	:

Description

BnaC08g36980DBnaC08g36980D protein [Source:UniProtKB/TrEMBL;Acc:X2C3K3]

Coordinates

chrLK031826:-:1408329..1411006

Molecular Weight (calculated)

61446.1 Da

IEP (calculated)

6.597

GRAVY (calculated)

-0.344

Length

543 amino acids

Sequence
(BLAST)

001: MGNCNVCVRP PNPEESKPKK TNQNRKLNPF TSDFIRSPAR TRAPKDAVIP TSHQTKITDK YILGRELGRG EFGITYLCTD RESREALACK SISKRKLRTA
101: VDVEDVRREV SIMSTLPDHP NVVKLRATYE DGESVHLVME LCEGGELFDR IVARGHYTER AAAGVARTIA EVVMMCHVNG VVHRDLKPEN FLFANKKENS
201: ALKAIDFGLS VFFKPGEKFK EIVGSPYYMA PEVLKRDYGP EVDVWSAGVI IYILLCGVPP FWAETEQGVA LAILRGVIDF KRDPWPQISE SAKSLVRQML
301: NPDPTKRLTA QQVLAHPWVQ NAKKAPNVPL GDIVRSRLKQ FSMMNRFKKK VLRVIAEHLS IQEVEVIKDM FSLMDEDNDG RITYLELKAG LQKVGSQLGE
401: PEIKMLMEVA DVDGNGFLDY GEFVAVIIHL QKIENDELFK LAFMFFDKDG STYIELDELR EALTDELGEP DVSVLNDIMR EVDSDKDGRI NYDEFVTMMK
501: AGTDWRKASR QYSRERFKSL SINLMKDGSL HLHDALTGQS VPV

Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)

001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV

Arabidopsis Description

CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.