Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G74740.1 EES01631 AT2G41090.1 17360592
AT1G74740.1 EES09201 AT2G41090.1 17360592
AT1G74740.1 EES16322 AT2G41090.1 17360592
AT1G74740.1 OQU78227 AT2G41090.1 17360592
AT1G74740.1 EES01631 AT2G41100.1 17360592
AT1G74740.1 EES09201 AT2G41100.1 17360592
AT1G74740.1 EES16322 AT2G41100.1 17360592
AT1G74740.1 OQU78227 AT2G41100.1 17360592
AT1G74740.1 KXG37587 AT4G14640.1 17360592
AT1G74740.1 KXG37588 AT4G14640.1 17360592
AT1G74740.1 EES01631 AT5G21274.1 17360592
AT1G74740.1 EES09201 AT5G21274.1 17360592
AT1G74740.1 EES16322 AT5G21274.1 17360592
AT1G74740.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013527_P002 Maize cytosol, plastid 94.37 94.53
TraesCS4A01G283400.1 Wheat plastid 80.38 82.78
TraesCS4D01G027600.1 Wheat plastid 80.2 82.46
Os03t0688300-01 Rice plasma membrane 80.2 81.88
GSMUA_Achr2P17730_001 Banana cytosol 53.92 78.41
TraesCS4B01G030100.1 Wheat plastid 80.2 78.33
HORVU4Hr1G004540.20 Barley plastid 80.38 78.24
VIT_17s0000g05520.t01 Wine grape cytosol 55.46 75.41
Solyc03g113390.2.1 Tomato cytosol 65.36 71.19
PGSC0003DMT400034291 Potato cytosol 65.19 71.0
KRH03406 Soybean cytosol 65.19 70.61
KRH56973 Soybean cytosol 64.85 70.5
KRH54494 Soybean cytosol 66.04 70.24
KRH63420 Soybean cytosol 66.55 70.14
CDY45391 Canola cytosol 64.33 69.05
Bra015896.1-P Field mustard cytosol 64.16 68.86
CDX73108 Canola cytosol 64.16 68.74
AT1G74740.1 Thale cress cytosol 62.8 68.02
CDX81903 Canola cytosol, plastid 62.97 67.96
AT1G18890.1 Thale cress cytosol, plastid 63.14 67.89
Bra031055.1-P Field mustard cytosol, plastid 61.26 67.61
CDY21691 Canola cytosol, plastid 62.97 67.46
EES19672 Sorghum cytosol 59.73 64.46
Bra025696.1-P Field mustard cytosol, plastid 57.34 63.64
EER99568 Sorghum cytosol 58.87 63.54
EES01704 Sorghum cytosol 58.7 63.12
EER93237 Sorghum cytosol 57.0 62.78
CDY26714 Canola cytosol 63.31 60.92
CDY19259 Canola cytosol, plastid 63.31 60.52
OQU80791 Sorghum cytosol, endoplasmic reticulum, plasma membrane 30.38 60.14
EES15873 Sorghum mitochondrion 53.24 54.83
EES04099 Sorghum cytosol 47.95 50.45
OQU89769 Sorghum mitochondrion 22.35 40.31
EER98402 Sorghum cytosol 35.15 40.08
KXG29360 Sorghum plastid 32.94 36.76
EER99788 Sorghum cytosol 34.47 34.06
EER94810 Sorghum cytosol 34.13 33.78
EER99712 Sorghum cytosol 34.13 33.28
KXG20873 Sorghum cytosol 33.11 31.04
KXG38195 Sorghum cytosol 31.74 29.02
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8054150UniProt:C5WPJ2
EnsemblPlants:EER93646ProteinID:EER93646ProteinID:EER93646.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0006950GO:GO:0006970GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009628GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987
GO:GO:0010152GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538
GO:GO:0035556GO:GO:0046777GO:GO:1902584InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF167InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220EnsemblPlantsGene:SORBI_3001G132800SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A82997
RefSeq:XP_002466648.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:10464458..10469295
Molecular Weight (calculated)
64910.6 Da
IEP (calculated)
9.047
GRAVY (calculated)
-0.467
Length
586 amino acids
Sequence
(BLAST)
001: MGNVCFCGTT STSPDQPEPD AATASKAPPP HPQGGHNKRP ATPPSSQQEE PSPRPTKPRP KARPKAAATT KPNNPYDSAP PASRGVGGAS ALAARVLDGV
101: VPHHPRLRVT DKYHLGRELG RGEFGVTRLA TDRATRERLA CKSIPKRRLR TAVDVADVRR EVAIMASLPD HPALVRLRAA YEDADAVHLV MELCDGGELF
201: DRIVARGRYT ERAAAAAART VAEVVRACHA HGVMHRDLKP ENFLYAGKSD DAQLKAIDFG LSVFFKPGER FTEIVGSPYY MAPEVLRRSY GPEVDIWSAG
301: VILYILLCGV PPFWAETEQG VARAILRGNL DLQREPWPRI SDGAKSLVRQ MLQMDPKKRP TAQQVLEHPW LQNARKAPNV PLGDVVRARL QQFSAMNKFK
401: KKAMRVIAEH LSVEEVEVIR DMFALMDTDK DGRVTLEELK AGLRKVGSKL AEPEMELLME AADVNGNGYL DYGEFVAITI HLQRLSNDAH LRKAFLFFDK
501: DSSGYIERAE LADALADEAG HTDEAALDNV MQEVDTNKDG RISFEEFVAM MKAGTDWRKA SRQYSRERFK TLSNSLIKDG SLRMAR
Best Arabidopsis Sequence Match ( AT1G74740.1 )
(BLAST)
001: MGNCIACVKF DPDNSKPNQK KKPPRGRQRN PYDDPDGLRT HAPLRVIPMS HQSQISDKYI LGRELGRGEF GITYLCTDRE TREALACKSI SKRKLRTAVD
101: VEDVRREVTI MSTLPEHPNV VKLKATYEDN ENVHLVMELC EGGELFDRIV ARGHYTERAA ATVARTIAEV VRMCHVNGVM HRDLKPENFL FANKKENSAL
201: KAIDFGLSVL FKPGERFTEI VGSPYYMAPE VLKRNYGPEV DVWSAGVILY ILLCGVPPFW AETEQGVALA ILRGVLDFKR DPWSQISESA KSLVKQMLEP
301: DSTKRLTAQQ VLDHPWIQNA KKAPNVPLGD IVRSRLKQFS MMNRLKKKAL RVIAEHLSIQ EVEVIRNMFT LMDDDNDGKI SYLELRAGLR KVGSQLGEPE
401: IKLLMEVADV NGNGCLDYGE FVAVIIHLQK MENDEHFRQA FMFFDKDGSG YIESEELREA LTDELGEPDN SVIIDIMREV DTDKDGKINY DEFVVMMKAG
501: TDWRKASRQY SRERFKSLSL NLMKDGSMHL HDALTGQSIA V
Arabidopsis Description
CPK30Calcium-dependent protein kinase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSF8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.