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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 2
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26714 Canola cytosol 96.74 97.37
CDX81903 Canola cytosol, plastid 83.52 94.29
CDY21691 Canola cytosol, plastid 83.69 93.78
AT1G18890.1 Thale cress cytosol, plastid 80.91 91.01
CDY45391 Canola cytosol 75.69 84.98
CDX73108 Canola cytosol 75.53 84.64
VIT_17s0000g05520.t01 Wine grape cytosol 58.4 83.06
KRH54494 Soybean cytosol 73.08 81.31
KRH63420 Soybean cytosol 73.57 81.12
PGSC0003DMT400034291 Potato cytosol 70.64 80.48
Solyc03g113390.2.1 Tomato cytosol 70.47 80.3
GSMUA_Achr2P17730_001 Banana cytosol 52.04 79.16
KRH03406 Soybean cytosol 69.49 78.74
KRH56973 Soybean cytosol 69.0 78.48
CDX73684 Canola cytosol 59.05 68.56
CDX90631 Canola cytosol 59.05 68.43
CDX78044 Canola cytosol, nucleus, plasma membrane 58.89 68.37
CDY29049 Canola cytosol 58.89 68.37
CDY23165 Canola cytosol 58.56 67.99
CDX95303 Canola cytosol 58.56 67.99
CDY42266 Canola cytosol 57.42 65.92
CDY44918 Canola cytosol 57.42 65.92
CDY53966 Canola cytosol 56.61 65.23
Os03t0688300-01 Rice plasma membrane 60.85 64.98
CDX92529 Canola cytosol 56.61 64.98
CDY14001 Canola cytosol 56.12 64.91
CDX97205 Canola cytosol 56.28 64.49
TraesCS4D01G027600.1 Wheat plastid 59.71 64.21
TraesCS4A01G283400.1 Wheat plastid 59.22 63.8
EER93646 Sorghum plastid 60.52 63.31
Zm00001d013527_P002 Maize cytosol, plastid 60.36 63.25
CDX67695 Canola cytosol 54.98 62.87
CDY06098 Canola cytosol 55.14 62.48
CDY33817 Canola cytosol 54.81 62.45
CDX72022 Canola cytosol 54.65 62.04
CDY14793 Canola cytosol 49.1 61.68
CDY06900 Canola cytosol 53.34 61.58
CDY48773 Canola cytosol 47.47 61.39
CDX79906 Canola cytosol 53.02 61.09
TraesCS4B01G030100.1 Wheat plastid 59.38 60.67
HORVU4Hr1G004540.20 Barley plastid 59.05 60.13
CDY10809 Canola cytosol 48.94 55.87
CDY34489 Canola cytosol 48.78 55.58
CDX84782 Canola cytosol, plastid 48.94 54.55
CDY23939 Canola cytosol, plastid 48.94 54.55
CDY19084 Canola plastid 49.92 54.06
CDY15391 Canola plastid 49.59 52.41
CDY40640 Canola cytosol 17.94 49.11
CDY16652 Canola cytosol 35.73 46.5
CDY10803 Canola cytosol 29.04 40.0
CDY24762 Canola cytosol 14.52 39.38
CDY38141 Canola cytosol, plastid 33.93 36.24
CDX81407 Canola plastid 31.97 36.23
CDY18593 Canola plastid 31.81 36.18
CDY45213 Canola plastid 31.32 36.16
CDY30782 Canola plastid 30.67 35.95
CDY63401 Canola cytosol, plastid 33.61 35.76
CDY57585 Canola cytosol, mitochondrion 24.14 35.75
CDX72575 Canola cytosol 31.16 35.3
CDY47052 Canola cytosol 31.0 35.12
CDY29208 Canola plastid 33.12 34.88
CDY69753 Canola cytosol, plastid 30.34 34.83
CDY07808 Canola plastid 33.12 34.76
CDY06943 Canola cytosol 25.12 33.05
CDY35427 Canola cytosol 30.51 32.98
CDY22505 Canola cytosol 30.51 32.92
CDY65651 Canola cytosol 30.83 32.31
CDX79956 Canola cytosol 30.34 32.24
CDY23873 Canola cytosol 30.34 32.18
CDY65016 Canola cytosol 31.0 31.99
CDY52824 Canola cytosol 30.67 31.65
CDX82311 Canola cytosol 30.51 31.59
CDY47375 Canola cytosol, nucleus, plasma membrane 29.53 31.53
CDX95464 Canola cytosol, plastid 30.34 31.42
CDX76010 Canola cytosol 29.2 31.4
CDY22990 Canola cytosol 30.34 31.31
CDY18568 Canola cytosol, plastid 30.34 31.31
CDX99267 Canola cytosol 30.34 31.21
CDX92303 Canola cytosol 30.34 31.21
CDX77233 Canola cytosol, plastid 30.02 31.13
CDY16510 Canola cytosol, plastid 30.18 31.04
CDX94570 Canola cytosol 37.52 31.0
CDX87112 Canola cytosol 14.36 30.34
CDX87128 Canola cytosol 28.22 29.83
CDY27530 Canola cytosol 28.87 29.7
CDY48019 Canola cytosol 28.87 29.7
CDY19836 Canola cytosol 28.06 29.66
CDX88104 Canola cytosol 27.9 29.33
CDY05930 Canola cytosol 28.22 28.93
CDY08129 Canola cytosol 28.06 28.91
CDX80445 Canola cytosol 27.24 28.64
CDY00200 Canola cytosol 28.22 26.49
CDX86978 Canola cytosol 27.9 26.35
CDY71104 Canola cytosol 5.55 24.29
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4MapMan:25.1.2.1Gene3D:3.30.200.20GO:A0A078G1B2
UniProt:A0A078G1B2EnsemblPlants:CDY19259ProteinID:CDY19259ProteinID:CDY19259.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005509GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00006575001InterPro:IPR000719
InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF167InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEB041SEG:seg::::
Description
BnaC05g14600DBnaC05g14600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1B2]
Coordinates
chrLK032093:-:655601..658347
Molecular Weight (calculated)
68929.6 Da
IEP (calculated)
5.999
GRAVY (calculated)
-0.344
Length
613 amino acids
Sequence
(BLAST)
001: MGNCNVCVKP PNSEESTQKP KRPNQNRKPN PYAAGDIVRS PARTRGTTLK DVVIPTSQRT KISDKYILGR ELGRGEFGIT YLCTDRETRE ALACKSISKR
101: KLRTAVDVED VRREVAIMST LPEHPNVVKL RATYEDGENV HLVMELCEGG ELFDRIVARG HYTERAAAGV ARTIAEVVMM CHSNGVVHRD LKPENFLFAN
201: KKENSALKAI DFGLSVFFKP GDKFTEIVGS PYYMAPEVLK RDYGPEVDVW SAGVIIYILL CGVPPFWAET EQGVALAILR GVIDFKRDPW PQVSESAKSL
301: VRQMLDPDPA KRLTAQQVLA HPWIQHAKKA PNVPLGDIVR SRLKQFSMMN RFKKKVLRVI AEHLSVQEVE VIKDMFSLMD EDNDGRITYP ELKAGLQKVG
401: SQLGEPEIKM LMEVADVDGN GFLDYGEFVA VIIHLQKIEN DELFKLAFMF FDKDGSTYIE LDELREALTD ELGEPDVSVL NDIMREVDAD KDGRINYDEF
501: VTMMKAGTDW RKASRQYSRE RFKSLSINLM KDGSLHLHDA LTGQSVPVVH FRPEQNLNSS SSSSPMESFT SASYSSEDIC PTFPDCGFRQ PNSGVVLSCL
601: DCFLKNGSLY CFE
Best Arabidopsis Sequence Match ( AT1G18890.1 )
(BLAST)
001: MGNCNACVRP DSKESKPSSK PKKPNRDRKL NPFAGDFTRS PAPIRVLKDV IPMSNQTQIS DKYILGRELG RGEFGITYLC TDRETHEALA CKSISKRKLR
101: TAVDIEDVRR EVAIMSTLPE HPNVVKLKAS YEDNENVHLV MELCEGGELF DRIVARGHYT ERAAAAVART IAEVVMMCHS NGVMHRDLKP ENFLFANKKE
201: NSPLKAIDFG LSVFFKPGDK FTEIVGSPYY MAPEVLKRDY GPGVDVWSAG VIIYILLCGV PPFWAETEQG VALAILRGVL DFKRDPWPQI SESAKSLVKQ
301: MLDPDPTKRL TAQQVLAHPW IQNAKKAPNV PLGDIVRSRL KQFSMMNRFK KKVLRVIAEH LSIQEVEVIK NMFSLMDDDK DGKITYPELK AGLQKVGSQL
401: GEPEIKMLME VADVDGNGFL DYGEFVAVII HLQKIENDEL FKLAFMFFDK DGSTYIELDE LREALADELG EPDASVLSDI MREVDTDKDG RINYDEFVTM
501: MKAGTDWRKA SRQYSRERFK SLSINLMKDG SLHLHDALTG QTVPV
Arabidopsis Description
CPK10Calcium-dependent protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V8]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.