CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY02176
CDY23090

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G49580.1	CDY02176	AT5G61010.1	21798944
AT1G49580.1	CDY23090	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16510	Canola	cytosol, plastid	98.82	97.99
Bra014201.1-P	Field mustard	cytosol, plastid	98.14	94.62
AT1G49580.1	Thale cress	cytosol	90.52	88.28
CDX95464	Canola	cytosol, plastid	81.05	80.91
CDY18568	Canola	cytosol, plastid	80.2	79.8
CDX92303	Canola	cytosol	79.53	78.86
CDX99267	Canola	cytosol	79.19	78.52
CDY22990	Canola	cytosol	78.17	77.78
CDX82311	Canola	cytosol	77.83	77.7
Os07t0619800-02	Rice	cytosol, plasma membrane	58.38	76.16
TraesCS2D01G173100.1	Wheat	cytosol	60.41	75.0
VIT_03s0063g00940.t01	Wine grape	cytosol	69.54	70.38
KRH50248	Soybean	cytosol	69.88	69.06
CDY69753	Canola	cytosol, plastid	62.27	68.91
KRH71170	Soybean	cytosol	69.71	68.9
GSMUA_Achr1P21380_001	Banana	cytosol	70.56	68.7
Solyc01g108400.2.1	Tomato	cytosol	68.19	68.54
PGSC0003DMT400066365	Potato	cytosol	67.68	68.03
CDY65651	Canola	cytosol	66.84	67.52
CDY52824	Canola	cytosol	67.34	67.0
CDY65016	Canola	cytosol	67.17	66.83
EER99712	Sorghum	cytosol	67.34	66.22
GSMUA_Achr2P07660_001	Banana	cytosol	67.85	66.06
Zm00001d006885_P002	Maize	cytosol	63.96	65.85
TraesCS2A01G165800.1	Wheat	cytosol, plastid	67.01	65.67
TraesCS2B01G191800.1	Wheat	cytosol	66.84	65.4
CDX79956	Canola	cytosol	60.91	62.39
CDY22505	Canola	cytosol	59.9	62.32
CDY35427	Canola	cytosol	59.73	62.26
CDY23873	Canola	cytosol	60.58	61.94
Zm00001d022166_P001	Maize	cytosol	58.88	60.73
CDY47375	Canola	cytosol, nucleus, plasma membrane	58.71	60.45
CDX76010	Canola	cytosol	58.04	60.18
Zm00001d000221_P001	Maize	cytosol	11.51	59.65
CDY57585	Canola	cytosol, mitochondrion	40.1	57.25
CDY48019	Canola	cytosol	57.36	56.88
CDY27530	Canola	cytosol	57.36	56.88
CDX87128	Canola	cytosol	52.79	53.79
CDY19836	Canola	cytosol	52.62	53.62
CDY08129	Canola	cytosol	53.98	53.61
CDX88104	Canola	cytosol	52.79	53.52
CDY05930	Canola	cytosol	53.64	53.01
CDY06943	Canola	cytosol	41.79	53.0
CDX80445	Canola	cytosol	51.95	52.66
HORVU2Hr1G030520.1	Barley	cytosol	41.96	50.1
CDX86978	Canola	cytosol	53.81	49.0
CDY00200	Canola	cytosol	53.81	48.7
CDY30782	Canola	plastid	40.61	45.89
CDY45213	Canola	plastid	41.12	45.76
CDX87112	Canola	cytosol	22.17	45.17
CDX81407	Canola	plastid	41.12	44.92
CDY18593	Canola	plastid	40.61	44.53
CDY38141	Canola	cytosol, plastid	42.13	43.38
CDY47052	Canola	cytosol	39.42	43.07
CDY63401	Canola	cytosol, plastid	41.62	42.71
CDX72575	Canola	cytosol	39.09	42.7
CDY07808	Canola	plastid	41.96	42.47
CDY29208	Canola	plastid	41.79	42.44
CDY40640	Canola	cytosol	14.72	38.84
CDY48773	Canola	cytosol	29.78	37.13
CDY42266	Canola	cytosol	32.66	36.14
CDY44918	Canola	cytosol	32.49	35.96
CDY14793	Canola	cytosol	29.61	35.86
CDX92529	Canola	cytosol	32.32	35.77
CDY14001	Canola	cytosol	31.81	35.47
CDY53966	Canola	cytosol	31.81	35.34
CDX97205	Canola	cytosol	31.98	35.33
CDY06900	Canola	cytosol	31.3	34.84
CDX79906	Canola	cytosol	31.3	34.77
CDX73684	Canola	cytosol	30.96	34.66
CDY29049	Canola	cytosol	30.8	34.47
CDX78044	Canola	cytosol, nucleus, plasma membrane	30.63	34.28
CDX95303	Canola	cytosol	30.63	34.28
CDX90631	Canola	cytosol	30.63	34.22
CDX67695	Canola	cytosol	30.96	34.14
CDY23165	Canola	cytosol	30.46	34.09
CDY33817	Canola	cytosol	30.96	34.01
CDY16652	Canola	cytosol	27.07	33.97
CDY45391	Canola	cytosol	31.3	33.88
CDY21691	Canola	cytosol, plastid	31.3	33.82
CDX73108	Canola	cytosol	31.3	33.82
CDY10809	Canola	cytosol	30.63	33.71
CDX72022	Canola	cytosol	30.8	33.7
CDX81903	Canola	cytosol, plastid	30.96	33.7
CDY06098	Canola	cytosol	30.8	33.64
CDY34489	Canola	cytosol	30.46	33.46
CDX84782	Canola	cytosol, plastid	30.29	32.55
CDY23939	Canola	cytosol, plastid	30.29	32.55
CDY19084	Canola	plastid	31.13	32.51
CDY15391	Canola	plastid	31.3	31.9
CDY26714	Canola	cytosol	31.13	30.21
CDY19259	Canola	cytosol, plastid	31.13	30.02
CDY71104	Canola	cytosol	7.11	30.0
CDY10803	Canola	cytosol	20.47	27.19
CDY24762	Canola	cytosol	8.63	22.57
CDX94570	Canola	cytosol	26.9	21.43

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	GO:A0A078CQ82	EnsemblPlants:CDX77233
ProteinID:CDX77233	ProteinID:CDX77233.1	InterPro:EF-hand-dom_pair	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00127906001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDB03C	:	:	:

Description

BnaC08g02780D

Coordinates

chrLK031810:-:19872..23114

Molecular Weight (calculated)

66330.3 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.342

Length

591 amino acids

Sequence
(BLAST)

001: MGGCTSKPST SGRPDNPFFP GNDYPLIDNP TPSASKASPF FPFYTPSPAR HRRNKSRDVT GGESKSVTST PLRQLRRAFN PPSPAKHIRA ALRRRKGKKE
101: AALSAEATEA PPQEEGEELG LDKRFGFAKD FHSRVELGDE IGRGHFGYTC SAKFRKGELK GQVVAVKIIP KSKMTSAIAI EDVRREVKIL QALSGHKNLV
201: QFYDAFEDNA NVYIAMELCE GGELLDRILA RGGKYSEDDA KPVIIQILNV VAFCHLQGVV HRDLKPENFL YTSKEENSQL KAIDFGLSDF VKPDERLNDI
301: VGSAYYVAPE VLHRSYTTEA DVWSIGVIAY ILLCGSRPFW ARTESGIFRA VLKADPSFDE APWPFLSSEA KDFVKRLLFK DPRRRMSASQ ALMHPWIRGY
401: DRDMNIPFDI LIFRQIKAYL RSSSLRKAAL RALSKTLITD EIIYLKTQFS FLSPNKDGFI TLGSIRSSLS SNATDEMKET RIPEFLALLN GLQHRGMDFA
501: EFCAAAINVH QHESLDCWEE SIRHAYELFE RNGNRAIVIE ELASELGVGP AITVHSVLHD WIRHTDGKLS FFGFAKLLHG VSVRPSVKTT R

Best Arabidopsis Sequence Match ( AT1G49580.1 )
(BLAST)

001: MGGCTSKPST SSGRPNPFAP GNDYPQIDDF APDHPGKSPI PTPSAAKASP FFPFYTPSPA RHRRNKSRDV GGGGESKSLT STPLRQLRRA FHPPSPAKHI
101: RAALRRRKGK KEAALSGVTQ LTTEVPQREE EEEVGLDKRF GFSKEFHSRV ELGEEIGRGH FGYTCSAKFK KGELKGQVVA VKIIPKSKMT TAIAIEDVRR
201: EVKILQALSG HKNLVQFYDA FEDNANVYIA MELCEGGELL DRILARGGKY SENDAKPVII QILNVVAFCH FQGVVHRDLK PENFLYTSKE ENSQLKAIDF
301: GLSDFVRPDE RLNDIVGSAY YVAPEVLHRS YTTEADVWSI GVIAYILLCG SRPFWARTES GIFRAVLKAD PSFDEPPWPF LSSDAKDFVK RLLFKDPRRR
401: MSASQALMHP WIRAYNTDMN IPFDILIFRQ MKAYLRSSSL RKAALRALSK TLIKDEILYL KTQFSLLAPN KDGLITMDTI RMALASNATE AMKESRIPEF
501: LALLNGLQYR GMDFEEFCAA AINVHQHESL DCWEQSIRHA YELFDKNGNR AIVIEELASE LGVGPSIPVH SVLHDWIRHT DGKLSFFGFV KLLHGVSVRA
601: SGKTTR

Arabidopsis Description

CRK8CDPK-related kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.