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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX78797
CDX92401
CDX95314
CDY23174
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G19100.1 CDX73678 AT3G51920.1 17360592
AT3G19100.1 CDX95314 AT3G51920.1 17360592
AT3G19100.1 CDY23174 AT3G51920.1 17360592
AT3G19100.1 CDX78797 AT4G17750.1 18466301
AT3G19100.1 CDY60785 AT4G17750.1 18466301
AT3G19100.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82311 Canola cytosol 95.12 95.44
CDX92303 Canola cytosol 91.41 91.11
CDX99267 Canola cytosol 90.91 90.6
CDY18568 Canola cytosol, plastid 90.07 90.07
CDX95464 Canola cytosol, plastid 89.56 89.86
AT3G19100.1 Thale cress cytosol 89.06 88.31
CDX77233 Canola cytosol, plastid 77.78 78.17
CDY16510 Canola cytosol, plastid 78.11 77.85
Os07t0619800-02 Rice cytosol, plasma membrane 56.57 74.17
TraesCS2D01G173100.1 Wheat cytosol 57.41 71.64
VIT_03s0063g00940.t01 Wine grape cytosol 69.53 70.72
KRH71170 Soybean cytosol 71.04 70.57
KRH50248 Soybean cytosol 70.88 70.4
CDY69753 Canola cytosol, plastid 62.12 69.1
Solyc01g108400.2.1 Tomato cytosol 68.18 68.88
PGSC0003DMT400066365 Potato cytosol 67.51 68.2
CDY65651 Canola cytosol 66.83 67.86
GSMUA_Achr1P21380_001 Banana cytosol 68.86 67.38
CDY52824 Canola cytosol 67.17 67.17
CDY65016 Canola cytosol 66.83 66.83
GSMUA_Achr2P07660_001 Banana cytosol 67.17 65.73
CDY22505 Canola cytosol 61.62 64.44
EER99712 Sorghum cytosol 64.81 64.06
CDY35427 Canola cytosol 60.94 63.84
Zm00001d006885_P002 Maize cytosol 61.62 63.76
CDX79956 Canola cytosol 61.78 63.6
CDY23873 Canola cytosol 61.45 63.15
CDY47375 Canola cytosol, nucleus, plasma membrane 60.94 63.07
TraesCS2B01G191800.1 Wheat cytosol 63.97 62.91
TraesCS2A01G165800.1 Wheat cytosol, plastid 63.8 62.85
CDX76010 Canola cytosol 60.1 62.63
Zm00001d000221_P001 Maize cytosol 11.78 61.4
Zm00001d022166_P001 Maize cytosol 56.73 58.81
CDY57585 Canola cytosol, mitochondrion 40.24 57.73
CDY48019 Canola cytosol 57.07 56.88
CDY27530 Canola cytosol 57.07 56.88
CDY06943 Canola cytosol 43.6 55.58
CDY19836 Canola cytosol 53.54 54.83
CDX87128 Canola cytosol 53.2 54.48
CDY08129 Canola cytosol 54.55 54.45
CDX88104 Canola cytosol 53.03 54.03
CDY05930 Canola cytosol 54.21 53.85
CDX80445 Canola cytosol 51.85 52.83
CDX86978 Canola cytosol 54.55 49.92
CDY00200 Canola cytosol 54.38 49.46
HORVU2Hr1G030520.1 Barley cytosol 40.24 48.28
CDX87112 Canola cytosol 22.56 46.21
CDY30782 Canola plastid 39.39 44.74
CDY45213 Canola plastid 39.9 44.63
CDX81407 Canola plastid 39.73 43.62
CDY18593 Canola plastid 39.23 43.23
CDY38141 Canola cytosol, plastid 40.91 42.33
CDY47052 Canola cytosol 38.38 42.14
CDX72575 Canola cytosol 38.05 41.77
CDY63401 Canola cytosol, plastid 40.4 41.67
CDY07808 Canola plastid 40.74 41.44
CDY29208 Canola plastid 40.57 41.41
CDY48773 Canola cytosol 29.97 37.55
CDY40640 Canola cytosol 14.14 37.5
CDX92529 Canola cytosol 32.66 36.33
CDY42266 Canola cytosol 32.15 35.77
CDY14001 Canola cytosol 31.82 35.66
CDY44918 Canola cytosol 31.99 35.58
CDY53966 Canola cytosol 31.48 35.15
CDX97205 Canola cytosol 31.65 35.14
CDY14793 Canola cytosol 28.79 35.04
CDX79906 Canola cytosol 31.14 34.77
CDX67695 Canola cytosol 31.31 34.7
CDX73684 Canola cytosol 30.81 34.66
CDY29049 Canola cytosol 30.64 34.47
CDY23165 Canola cytosol 30.64 34.47
CDX78044 Canola cytosol, nucleus, plasma membrane 30.64 34.47
CDX95303 Canola cytosol 30.64 34.47
CDY06900 Canola cytosol 30.81 34.46
CDY33817 Canola cytosol 31.14 34.39
CDY21691 Canola cytosol, plastid 31.65 34.37
CDX81903 Canola cytosol, plastid 31.31 34.25
CDX90631 Canola cytosol 30.47 34.22
CDY45391 Canola cytosol 31.31 34.07
CDX73108 Canola cytosol 31.31 34.0
CDX72022 Canola cytosol 30.81 33.89
CDY06098 Canola cytosol 30.81 33.83
CDY10809 Canola cytosol 30.47 33.71
CDY34489 Canola cytosol 30.3 33.46
CDY16652 Canola cytosol 26.43 33.33
CDX84782 Canola cytosol, plastid 30.64 33.09
CDY23939 Canola cytosol, plastid 30.64 33.09
CDY19084 Canola plastid 30.98 32.51
CDY15391 Canola plastid 31.14 31.9
CDY26714 Canola cytosol 31.31 30.54
CDY19259 Canola cytosol, plastid 31.31 30.34
CDY71104 Canola cytosol 7.07 30.0
CDY10803 Canola cytosol 20.03 26.74
CDY24762 Canola cytosol 8.42 22.12
CDX94570 Canola cytosol 25.93 20.75
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078G995UniProt:A0A078G995
EnsemblPlants:CDY22990ProteinID:CDY22990ProteinID:CDY22990.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00021414001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF115InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE226BSEG:seg:
Description
BnaC03g40790DBnaC03g40790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G995]
Coordinates
chrLK032138:-:480812..483442
Molecular Weight (calculated)
66256.9 Da
IEP (calculated)
7.973
GRAVY (calculated)
-0.213
Length
594 amino acids
Sequence
(BLAST)
001: MGGCTSKPST SVKHIPHAPS EAIPQNVDST PAHLENSPAR TSTAVKASPL LPFYTPSPAK HRRNKSVGGE SKSVTSIPLR QLVRAFHPPS PAKHIRDVLR
101: RRKGKKEATL PAEGKSEEEE EVGLDKRFGY SKEFESRMEL GEEIGRGHFG YTCSAKFKKG ELKDLEVAVK VIPKSKMTTA ISIEDVRREV KILRALSGHN
201: NLVQFYDAFE DNDNVYIAME LCGGGELLDR ILARGGKYSE DDAKEVLIQI LNVVAFCHLQ GVVHRDLKPE NFLYTCKEEN SQLKVIDFGL SDFVRPHERL
301: NDIVGSAYYV APEVLHRSYT TEADVWSIGV IAYILLCGSR PFWARTESGI FRAVLKADPS FDEPPWPSLS LEAKDFVKRL LYKDPRKRMT ASQALMHPWI
401: AGCKKNMSIP FDILIFKQIK AYLKSSSLRK AALMALSKTL ITDEVLYLKA QFALLAPNIN GLITLDNITS ALAINATEVM KESRIPDFLA LLNGLECKGM
501: DFEEFCAASI SVHQHESLDC WEQSVRHAYE LFDMNGNRVI IIEELASELG VGSSIPVHTI LHDWIRHTDG KLSFLGFVKL LHGVSTLQPL AKTG
Best Arabidopsis Sequence Match ( AT3G19100.1 )
(BLAST)
001: MGGCTSKPSS SVKPNPYAPK DAVLQNDDST PAHPGKSPVR SSPAVKASPF FPFYTPSPAR HRRNKSRDGG GGESKSVTST PLRQLARAFH PPSPARHIRD
101: VLRRRKEKKE AALPAARQQK EEEEREEVGL DKRFGFSKEL QSRIELGEEI GRGHFGYTCS AKFKKGELKD QEVAVKVIPK SKMTSAISIE DVRREVKILR
201: ALSGHQNLVQ FYDAFEDNAN VYIVMELCGG GELLDRILAR GGKYSEDDAK AVLIQILNVV AFCHLQGVVH RDLKPENFLY TSKEENSMLK VIDFGLSDFV
301: RPDERLNDIV GSAYYVAPEV LHRSYTTEAD VWSIGVIAYI LLCGSRPFWA RTESGIFRAV LKADPSFDEP PWPSLSFEAK DFVKRLLYKD PRKRMTASQA
401: LMHPWIAGYK KIDIPFDILI FKQIKAYLRS SSLRKAALMA LSKTLTTDEL LYLKAQFAHL APNKNGLITL DSIRLALATN ATEAMKESRI PDFLALLNGL
501: QYKGMDFEEF CAASISVHQH ESLDCWEQSI RHAYELFEMN GNRVIVIEEL ASELGVGSSI PVHTILNDWI RHTDGKLSFL GFVKLLHGVS TRQSLAKTR
Arabidopsis Description
CRK2CDPK-related kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.