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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G073850.1
HORVU3Hr1G073910.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU5Hr1G123770.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49580.1 HORVU3Hr1G073850.1 AT5G61010.1 21798944
AT1G49580.1 HORVU3Hr1G073910.1 AT5G61010.1 21798944
AT3G19100.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G19100.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G19100.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G19100.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G19100.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G19100.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G19100.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G19100.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G19100.1 HORVU5Hr1G123770.1 AT4G17750.1 18466301
AT3G19100.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT3G19100.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT3G19100.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT3G19100.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT3G19100.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT3G19100.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT3G19100.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT3G19100.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G026700.1 Barley plasma membrane 20.4 72.14
HORVU7Hr1G066710.3 Barley cytosol 22.42 64.91
HORVU6Hr1G016380.1 Barley cytosol 22.42 64.91
HORVU5Hr1G097280.1 Barley extracellular, plasma membrane 12.32 64.89
TraesCS2D01G173100.1 Wheat cytosol 61.21 63.66
Os07t0619800-02 Rice cytosol, plasma membrane 55.15 60.26
HORVU1Hr1G005350.3 Barley endoplasmic reticulum, plasma membrane 23.43 60.1
TraesCS2B01G191800.1 Wheat cytosol 63.84 52.32
TraesCS2A01G165800.1 Wheat cytosol, plastid 63.23 51.91
HORVU3Hr1G109290.2 Barley plasma membrane 10.3 51.0
Zm00001d022166_P001 Maize cytosol 58.59 50.61
EER99712 Sorghum cytosol 60.4 49.75
Zm00001d006885_P002 Maize cytosol 55.76 48.08
KRH33065 Soybean cytosol 26.46 44.71
KRH57894 Soybean cytosol, plastid 51.92 44.46
GSMUA_Achr1P21380_001 Banana cytosol 53.74 43.82
VIT_03s0063g00940.t01 Wine grape cytosol 51.52 43.66
KRH28502 Soybean cytosol, mitochondrion 50.1 43.66
PGSC0003DMT400001990 Potato cytosol 51.72 43.39
Solyc02g065070.2.1 Tomato cytosol 51.72 43.32
CDY69753 Canola cytosol, plastid 46.46 43.07
Solyc02g090510.2.1 Tomato nucleus 52.53 42.83
GSMUA_Achr2P07660_001 Banana cytosol 52.32 42.67
VIT_00s0379g00070.t01 Wine grape cytosol, plasma membrane 27.47 42.37
CDY52824 Canola cytosol 50.71 42.26
CDY65016 Canola cytosol 50.71 42.26
Bra036089.1-P Field mustard cytosol 50.71 42.26
KRH76957 Soybean plastid 51.52 42.22
CDY65651 Canola cytosol 49.7 42.05
Solyc01g108400.2.1 Tomato cytosol 49.9 42.01
CDX77233 Canola cytosol, plastid 50.1 41.96
KRH50248 Soybean cytosol 50.3 41.64
CDY16510 Canola cytosol, plastid 50.1 41.61
PGSC0003DMT400066365 Potato cytosol 49.29 41.5
KRH71170 Soybean cytosol 49.49 40.97
CDX95464 Canola cytosol, plastid 48.69 40.71
Bra037539.1-P Field mustard cytosol, plastid 48.48 40.4
CDY18568 Canola cytosol, plastid 48.48 40.4
CDX92303 Canola cytosol 48.48 40.27
CDX99267 Canola cytosol 48.48 40.27
Bra022388.1-P Field mustard cytosol 48.48 40.27
PGSC0003DMT400026076 Potato cytosol 52.12 40.25
CDY22990 Canola cytosol 48.28 40.24
Bra014201.1-P Field mustard cytosol, plastid 49.7 40.13
AT1G49580.1 Thale cress cytosol 49.09 40.1
AT3G19100.1 Thale cress cytosol 48.48 40.07
CDX82311 Canola cytosol 47.88 40.03
HORVU2Hr1G025890.1 Barley cytosol 64.24 39.75
AT3G50530.2 Thale cress plastid 50.71 39.72
HORVU1Hr1G070840.3 Barley cytosol 19.19 39.58
HORVU4Hr1G078080.2 Barley cytosol 20.0 37.36
HORVU7Hr1G091360.1 Barley cytosol 46.26 36.76
HORVU1Hr1G047350.2 Barley cytosol 46.26 36.52
Bra001734.1-P Field mustard cytosol, plastid 47.47 35.99
HORVU6Hr1G014700.6 Barley cytosol, mitochondrion, plastid 36.16 34.16
HORVU3Hr1G087600.1 Barley cytosol, plastid 28.69 26.69
HORVU5Hr1G110900.3 Barley cytosol 28.28 26.17
HORVU5Hr1G078430.2 Barley mitochondrion 28.08 25.09
HORVU5Hr1G029260.2 Barley mitochondrion 28.08 24.87
HORVU4Hr1G004540.20 Barley plastid 28.69 23.59
HORVU7Hr1G056060.7 Barley cytosol 25.66 22.72
VIT_00s0577g00010.t01 Wine grape plasma membrane 24.24 22.22
HORVU1Hr1G071060.1 Barley endoplasmic reticulum, plasma membrane 12.32 18.05
Zm00001d000221_P001 Maize cytosol 1.01 4.39
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7UniProt:A0A287HJI6GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G030520EnsemblPlants:HORVU2Hr1G030520.1InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF115InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000B462D3BSEG:seg
Description
No Description!
Coordinates
chrchr2H:+:112360955..112366249
Molecular Weight (calculated)
36976.6 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.123
Length
495 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXHGPSR PAIPEEGDSD GGRGLDKGFG FNKGFAAKYD
201: LGDEVGRGHF GYTCAAKIRK GARKGDAVAV KVIPKAKMTT SIAIEDVRRE VKILKALAGH KNLVQFYDAY EDNEKVYIVM ELCEGGELLD RILSSRGGKY
301: SEDDAKSVLV QILNVVAFCH IQGVVHRDLK PENFLFTSKD ENSQLKTIDF GLSDFVKPDE RLNDIVGSAY YVAPEVLHRC YSTEADVWSI GVIAYILLCG
401: SRPFWARTES GIFRSVLKAD PSYNEAPWPS LTPEAMDFVK RLLCKDPRRR MTAAQALGHP WIRNYNDIKM PLDVLILYFV LSKLIFVLHH YAKLL
Best Arabidopsis Sequence Match ( AT1G49580.1 )
(BLAST)
001: MGGCTSKPST SSGRPNPFAP GNDYPQIDDF APDHPGKSPI PTPSAAKASP FFPFYTPSPA RHRRNKSRDV GGGGESKSLT STPLRQLRRA FHPPSPAKHI
101: RAALRRRKGK KEAALSGVTQ LTTEVPQREE EEEVGLDKRF GFSKEFHSRV ELGEEIGRGH FGYTCSAKFK KGELKGQVVA VKIIPKSKMT TAIAIEDVRR
201: EVKILQALSG HKNLVQFYDA FEDNANVYIA MELCEGGELL DRILARGGKY SENDAKPVII QILNVVAFCH FQGVVHRDLK PENFLYTSKE ENSQLKAIDF
301: GLSDFVRPDE RLNDIVGSAY YVAPEVLHRS YTTEADVWSI GVIAYILLCG SRPFWARTES GIFRAVLKAD PSFDEPPWPF LSSDAKDFVK RLLFKDPRRR
401: MSASQALMHP WIRAYNTDMN IPFDILIFRQ MKAYLRSSSL RKAALRALSK TLIKDEILYL KTQFSLLAPN KDGLITMDTI RMALASNATE AMKESRIPEF
501: LALLNGLQYR GMDFEEFCAA AINVHQHESL DCWEQSIRHA YELFDKNGNR AIVIEELASE LGVGPSIPVH SVLHDWIRHT DGKLSFFGFV KLLHGVSVRA
601: SGKTTR
Arabidopsis Description
CRK8CDPK-related kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX86]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.