CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRG95394
KRH07474
KRH18664
KRH39566
KRH54704
KRH63230
KRH67075
KRH74387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G49580.1	KRG95394	AT3G46810.1	21798944
AT1G49580.1	KRH67075	AT3G46810.1	21798944
AT1G49580.1	KRH54704	AT5G61010.1	21798944
AT1G49580.1	KRH63230	AT5G61010.1	21798944
AT3G19100.1	KRG89812	AT2G41090.1	17360592
AT3G19100.1	KRG94975	AT2G41090.1	17360592
AT3G19100.1	KRH18664	AT2G41090.1	17360592
AT3G19100.1	KRH07474	AT4G17750.1	18466301
AT3G19100.1	KRH39566	AT4G17750.1	18466301
AT3G19100.1	KRH74387	AT4G17750.1	18466301
AT3G19100.1	KRG89812	AT5G21274.1	17360592
AT3G19100.1	KRG94975	AT5G21274.1	17360592
AT3G19100.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50248	Soybean	cytosol	97.66	97.66
VIT_03s0063g00940.t01	Wine grape	cytosol	81.44	83.39
Os07t0619800-02	Rice	cytosol, plasma membrane	61.54	81.24
Solyc01g108400.2.1	Tomato	cytosol	78.93	80.27
PGSC0003DMT400066365	Potato	cytosol	78.6	79.93
KRH57894	Soybean	cytosol, plastid	75.75	78.37
TraesCS2D01G173100.1	Wheat	cytosol	62.21	78.15
KRH28502	Soybean	cytosol, mitochondrion	73.91	77.82
Zm00001d000221_P001	Maize	cytosol	14.72	77.19
GSMUA_Achr1P21380_001	Banana	cytosol	77.59	76.44
KRG95088	Soybean	cytosol	52.68	75.72
KRH76957	Soybean	plastid	76.25	75.5
GSMUA_Achr2P07660_001	Banana	cytosol	75.08	73.97
Zm00001d006885_P002	Maize	cytosol	69.23	72.13
EER99712	Sorghum	cytosol	72.41	72.05
CDX95464	Canola	cytosol, plastid	70.9	71.62
AT3G19100.1	Thale cress	cytosol	71.74	71.62
KRH33063	Soybean	endoplasmic reticulum, vacuole	40.8	71.55
CDX92303	Canola	cytosol	71.24	71.48
Bra022388.1-P	Field mustard	cytosol	71.24	71.48
CDY18568	Canola	cytosol, plastid	70.9	71.38
Bra037539.1-P	Field mustard	cytosol, plastid	70.9	71.38
CDX99267	Canola	cytosol	70.9	71.14
CDX82311	Canola	cytosol	70.4	71.11
CDY22990	Canola	cytosol	70.57	71.04
AT1G49580.1	Thale cress	cytosol	71.91	70.96
TraesCS2A01G165800.1	Wheat	cytosol, plastid	71.07	70.48
TraesCS2B01G191800.1	Wheat	cytosol	71.07	70.36
CDX77233	Canola	cytosol, plastid	68.9	69.71
CDY16510	Canola	cytosol, plastid	69.4	69.63
KRH71707	Soybean	cytosol	67.73	69.47
Bra014201.1-P	Field mustard	cytosol, plastid	69.4	67.7
KRH06401	Soybean	cytosol	46.66	67.23
Zm00001d022166_P001	Maize	cytosol	62.88	65.62
Bra001734.1-P	Field mustard	cytosol, plastid	68.56	62.79
KRH33065	Soybean	cytosol	30.27	61.77
KRH64343	Soybean	cytosol	60.87	60.97
KRH47835	Soybean	cytosol	60.2	60.81
KRH53593	Soybean	cytosol	60.2	60.1
KRH26154	Soybean	cytosol	38.13	57.72
HORVU2Hr1G030520.1	Barley	cytosol	40.97	49.49
KRH08079	Soybean	plastid	40.64	46.02
KRH69782	Soybean	plastid	40.64	45.85
KRH28800	Soybean	plastid	41.97	44.66
KRH76656	Soybean	plastid	41.47	44.13
KRG95275	Soybean	cytosol	34.28	38.32
KRH66958	Soybean	cytosol, mitochondrion	34.11	38.2
KRH71977	Soybean	cytosol	32.27	36.76
KRH33161	Soybean	cytosol	32.27	36.55
KRH56973	Soybean	cytosol	32.94	36.55
KRH00256	Soybean	cytosol	29.1	36.25
KRH03406	Soybean	cytosol	32.61	36.04
KRH54494	Soybean	cytosol	33.11	35.93
KRH49392	Soybean	cytosol	31.77	35.65
KRH63420	Soybean	cytosol	33.11	35.61
KRH24650	Soybean	mitochondrion, plastid	30.43	34.15
KRH29653	Soybean	plastid	30.77	33.95

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100807672	MapMan:18.4.5.5	Gene3D:3.30.200.20	EMBL:ACUP02000876
InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_02G134600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	UniProt:I1JEW5	InterPro:IPR000719
EnsemblPlants:KRH71170	ProteinID:KRH71170	ProteinID:KRH71170.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF249	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002336C2C	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:13920517..13925444

Molecular Weight (calculated)

66836.1 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.345

Length

598 amino acids

Sequence
(BLAST)

001: MGVCTSKPQK PNPYALREAE AEADPSQNPK TTLSPAGADT PRRKDDVSTG KRSPFFPFYS PSPARFLKKS PAPAGGSRSA SSTPRRFFRR PFPPPSPAKH
101: IRAVLARRQG KKASATAAIP EEGEEGAADL DKRFGFSKEF TSRLEVGEEV GRGHFGYTCS ARFKKGELKG QQVAVKVIPK AKMTTAIAIE DVRREVKILR
201: ALNGHNNLIQ FYDAFEDQDN VYIVMELCEG GELLDMILSR GGKYSEDDAK AVMVQILNVV AFCHLQGVVH RDLKPENFLY AKKDESSELK AIDFGLSDFV
301: RPDERLNDIV GSAYYVAPEV LHRSYGTEAD VWSIGVIAYI LLCGSRPFWA RTESGIFRAV LKADPSFDET PWPSLSLEAK DFVKRILNKD PRKRISAAQA
401: LSHPWIRNCN NVKVPLDILI FKLMKTYMRS SSLRKAALRA LSKTLTADEL YYLRGQFALL EPSKNGSISL ENVNKALMKY ATDAMKESRI PDFLSSLNSL
501: QYRRMDFEEF CAAALSVHQL EALDRWEQHA RCAYELFDKD GNRAIVIEEL ASELGLGPSI PVHVVLHDWI RHTDGKLSFL GFVKLLHGVS SRSLAKVQ

Best Arabidopsis Sequence Match ( AT3G50530.1 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.