Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G173100.1 | Wheat | cytosol | 78.94 | 100.0 |
| TraesCS2B01G191800.1 | Wheat | cytosol | 98.67 | 98.51 |
| Os07t0619800-02 | Rice | cytosol, plasma membrane | 72.31 | 96.25 |
| Zm00001d000221_P001 | Maize | cytosol | 17.41 | 92.11 |
| EER99712 | Sorghum | cytosol | 90.88 | 91.18 |
| Zm00001d006885_P002 | Maize | cytosol | 86.57 | 90.94 |
| VIT_00s0379g00070.t01 | Wine grape | cytosol, plasma membrane | 43.95 | 82.55 |
| Zm00001d022166_P001 | Maize | cytosol | 75.79 | 79.76 |
| GSMUA_Achr1P21380_001 | Banana | cytosol | 75.62 | 75.12 |
| VIT_03s0063g00940.t01 | Wine grape | cytosol | 71.81 | 74.14 |
| KRH57894 | Soybean | cytosol, plastid | 70.32 | 73.36 |
| GSMUA_Achr2P07660_001 | Banana | cytosol | 73.8 | 73.31 |
| KRH28502 | Soybean | cytosol, mitochondrion | 68.66 | 72.89 |
| CDY69753 | Canola | cytosol, plastid | 64.34 | 72.66 |
| PGSC0003DMT400001990 | Potato | cytosol | 70.81 | 72.37 |
| Solyc01g108400.2.1 | Tomato | cytosol | 70.32 | 72.11 |
| Solyc02g065070.2.1 | Tomato | cytosol | 70.65 | 72.08 |
| PGSC0003DMT400066365 | Potato | cytosol | 69.65 | 71.43 |
| KRH50248 | Soybean | cytosol | 70.65 | 71.24 |
| KRH71170 | Soybean | cytosol | 70.48 | 71.07 |
| CDY65651 | Canola | cytosol | 68.82 | 70.94 |
| CDY52824 | Canola | cytosol | 69.82 | 70.88 |
| Bra036089.1-P | Field mustard | cytosol | 69.82 | 70.88 |
| CDY65016 | Canola | cytosol | 69.65 | 70.71 |
| Solyc02g090510.2.1 | Tomato | nucleus | 70.48 | 70.02 |
| KRH76957 | Soybean | plastid | 69.98 | 69.87 |
| CDX77233 | Canola | cytosol, plastid | 65.67 | 67.01 |
| TraesCS2A01G146200.2 | Wheat | cytosol | 65.51 | 66.84 |
| PGSC0003DMT400026076 | Potato | cytosol | 70.48 | 66.3 |
| AT3G50530.2 | Thale cress | plastid | 69.49 | 66.3 |
| CDY16510 | Canola | cytosol, plastid | 65.51 | 66.28 |
| CDX95464 | Canola | cytosol, plastid | 64.68 | 65.88 |
| AT1G49580.1 | Thale cress | cytosol | 66.17 | 65.84 |
| CDX99267 | Canola | cytosol | 64.84 | 65.6 |
| Bra037539.1-P | Field mustard | cytosol, plastid | 64.51 | 65.49 |
| CDY18568 | Canola | cytosol, plastid | 64.51 | 65.49 |
| AT3G19100.1 | Thale cress | cytosol | 64.84 | 65.28 |
| CDX92303 | Canola | cytosol | 64.51 | 65.27 |
| Bra022388.1-P | Field mustard | cytosol | 64.51 | 65.27 |
| CDX82311 | Canola | cytosol | 63.68 | 64.86 |
| Bra014201.1-P | Field mustard | cytosol, plastid | 65.34 | 64.27 |
| CDY22990 | Canola | cytosol | 62.85 | 63.8 |
| HORVU2Hr1G030520.1 | Barley | cytosol | 51.91 | 63.23 |
| KRH33065 | Soybean | cytosol | 29.52 | 60.75 |
| TraesCS7A01G384500.1 | Wheat | cytosol | 60.36 | 58.52 |
| Bra001734.1-P | Field mustard | cytosol, plastid | 62.19 | 57.43 |
| TraesCS1A01G178400.1 | Wheat | cytosol | 58.71 | 56.19 |
| TraesCS6A01G089400.2 | Wheat | cytosol | 38.97 | 45.99 |
| TraesCS2A01G239900.1 | Wheat | cytosol | 38.81 | 45.97 |
| TraesCS3A01G351300.1 | Wheat | cytosol | 33.0 | 36.38 |
| TraesCS2A01G199700.1 | Wheat | cytosol | 32.5 | 36.1 |
| TraesCS4A01G283400.1 | Wheat | plastid | 33.5 | 35.5 |
| TraesCS1A01G292200.1 | Wheat | cytosol | 32.17 | 35.21 |
| VIT_00s0577g00010.t01 | Wine grape | plasma membrane | 31.51 | 35.19 |
| TraesCS5A01G463100.2 | Wheat | cytosol | 30.51 | 34.46 |
| TraesCS5A01G298500.1 | Wheat | mitochondrion | 31.01 | 34.12 |
| TraesCS5A01G118200.1 | Wheat | mitochondrion, plastid | 30.51 | 33.27 |
| TraesCS7A01G267000.1 | Wheat | cytosol, mitochondrion | 29.85 | 30.87 |
| TraesCS4A01G458300.1 | Wheat | cytosol | 57.71 | 21.23 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.5 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF115 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS2A01G165800 | EnsemblPlants:TraesCS2A01G165800.1 | TIGR:cd05117 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:118441743..118446493
Molecular Weight (calculated)
66734.1 Da
IEP (calculated)
9.579
GRAVY (calculated)
-0.311
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCHAKPRT RDADGASPPP PAPATPPPPS STAPATPASK KHWTSSPFFP FSTPSPSPAH HLFSSSSAAS PRASSRSPAP AGTKSPAPAT PARRLLRLPF
101: PPPSPAKHIR QALARRHGPP RPAIPEEDGD GGRGLDKGFG FNKGFAAKYD LGDEVGRGHF GYTCAARIRK GARKGDAVAV KVIPKAKMTT SIAIEDVRRE
201: VKILKALAGH KNLVQFYDAY EDNENVYIVM ELCEGGELLD RILSRGGKYS EDDAKSVLVQ ILNVVAFCHI QGVVHRDLKP ENFLFTSKDE NSQLKTIDFG
301: LSDFVKPDER LNDIVGSAYY VAPEVLHRCY STEADVWSIG VIAYILLCGS RPFWARTESG IFRSVLKADP SYNEAPWPSL TPEAMDFVKR LLCKDPRRRM
401: TAAQALGHPW IRNYNDIKMP LDVLIFRLIK AYIRSSSLRK AALKALSKTL TVDELFYLKG QFSLLEPDRN GCITLDNIRM ALTREATDAM KETRVQEILV
501: SLSALQYRRM DFHEFCAAAV SVHQLEALDR WEQHARSAYE IFEKDGNRAI VIDELASELG LSPSVPLHVV LQDWIRHTDG KLSFLGFVKL LHGMSSRSLS
601: KMR
101: PPPSPAKHIR QALARRHGPP RPAIPEEDGD GGRGLDKGFG FNKGFAAKYD LGDEVGRGHF GYTCAARIRK GARKGDAVAV KVIPKAKMTT SIAIEDVRRE
201: VKILKALAGH KNLVQFYDAY EDNENVYIVM ELCEGGELLD RILSRGGKYS EDDAKSVLVQ ILNVVAFCHI QGVVHRDLKP ENFLFTSKDE NSQLKTIDFG
301: LSDFVKPDER LNDIVGSAYY VAPEVLHRCY STEADVWSIG VIAYILLCGS RPFWARTESG IFRSVLKADP SYNEAPWPSL TPEAMDFVKR LLCKDPRRRM
401: TAAQALGHPW IRNYNDIKMP LDVLIFRLIK AYIRSSSLRK AALKALSKTL TVDELFYLKG QFSLLEPDRN GCITLDNIRM ALTREATDAM KETRVQEILV
501: SLSALQYRRM DFHEFCAAAV SVHQLEALDR WEQHARSAYE IFEKDGNRAI VIDELASELG LSPSVPLHVV LQDWIRHTDG KLSFLGFVKL LHGMSSRSLS
601: KMR
001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H
Arabidopsis Description
CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.