Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G333800.1 | Wheat | cytosol | 98.66 | 98.66 |
| TraesCS3D01G299200.1 | Wheat | peroxisome | 98.66 | 98.66 |
| HORVU3Hr1G073850.1 | Barley | cytosol, nucleus, peroxisome | 96.49 | 95.7 |
| HORVU3Hr1G073910.1 | Barley | cytosol | 95.33 | 95.33 |
| KXG33434 | Sorghum | peroxisome | 79.63 | 78.71 |
| Os01t0763750-01 | Rice | cytosol | 77.13 | 76.74 |
| Zm00001d043365_P001 | Maize | peroxisome | 77.46 | 72.61 |
| GSMUA_Achr4P23470_001 | Banana | cytosol | 48.75 | 48.91 |
| Bra025399.1-P | Field mustard | cytosol | 38.23 | 45.89 |
| GSMUA_Achr7P00520_001 | Banana | cytosol | 45.91 | 45.38 |
| CDY44387 | Canola | cytosol | 40.23 | 42.13 |
| CDY04082 | Canola | cytosol | 40.23 | 42.06 |
| VIT_14s0068g00250.t01 | Wine grape | cytosol | 44.24 | 40.64 |
| PGSC0003DMT400003687 | Potato | nucleus | 43.91 | 39.97 |
| Solyc02g088800.1.1 | Tomato | nucleus | 43.91 | 39.91 |
| VIT_17s0000g07350.t01 | Wine grape | cytosol | 42.24 | 39.35 |
| Bra033104.1-P | Field mustard | cytosol | 41.9 | 38.85 |
| KRH45035 | Soybean | cytosol | 43.41 | 38.18 |
| KRH01279 | Soybean | cytosol | 43.24 | 38.09 |
| PGSC0003DMT400032221 | Potato | nucleus | 41.9 | 37.97 |
| CDX86365 | Canola | cytosol | 40.9 | 37.87 |
| AT3G29400.1 | Thale cress | cytosol | 41.4 | 37.69 |
| CDX85273 | Canola | cytosol | 40.73 | 37.54 |
| KRH54704 | Soybean | cytosol | 39.07 | 37.08 |
| KRH63230 | Soybean | cytosol | 38.4 | 36.51 |
| CDY02176 | Canola | cytosol | 32.05 | 34.91 |
| Bra012987.1-P | Field mustard | cytosol | 31.89 | 34.73 |
| PGSC0003DMT400063083 | Potato | cytosol | 36.39 | 34.33 |
| Solyc03g115070.1.1 | Tomato | cytosol | 36.39 | 34.33 |
| TraesCS7A01G259600.1 | Wheat | cytosol, nucleus, plastid | 30.72 | 31.67 |
| TraesCS7A01G134400.1 | Wheat | cytosol | 35.56 | 31.6 |
| TraesCS3A01G429600.1 | Wheat | cytosol | 34.89 | 31.48 |
| AT5G61010.1 | Thale cress | cytosol | 32.89 | 30.83 |
| TraesCS2A01G281600.1 | Wheat | cytosol | 34.06 | 30.09 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 32.22 | 30.06 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 28.71 | 28.76 |
| TraesCS4A01G200100.3 | Wheat | cytosol, mitochondrion | 30.05 | 27.65 |
| TraesCS2A01G583800.2 | Wheat | cytosol, mitochondrion, nucleus | 29.38 | 27.63 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 28.88 | 26.7 |
| TraesCS5A01G125500.1 | Wheat | cytosol, mitochondrion | 27.38 | 25.75 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 27.88 | 25.54 |
| TraesCS2A01G583700.1 | Wheat | cytosol, plastid | 24.54 | 23.15 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 26.71 | 22.6 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 27.38 | 22.19 |
| CDY23090 | Canola | nucleus | 33.89 | 21.64 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G302600.1 | EnsemblPlantsGene:TraesCS3A01G302600 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF49 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | MapMan:22.6.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:536626492..536628291
Molecular Weight (calculated)
68366.2 Da
IEP (calculated)
5.102
GRAVY (calculated)
-0.293
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAPELDKQY SNIQLGEEVE ICDIKLALKA LRKKILSLDF HNSLHVHDPQ NSFEYLEVLY KLRQLSEKLG NLDPGGEVKE HKELTVYADD LFEMAMARLE
101: EEFVYLLTYY KQPLEQELLS FRSTEDGSTD EFSSSSFSEE QSEGKSTQTG SSGGSEYFVA DLIQPGALSA VKSIANFMFL SDYNNECCQA YINARQGAID
201: EFIGSLHIDK HSIEELMSTK WNKLSASIKR WNRAMKAFVR VYLASERRLS SLVFGDLSET AVDLCFYEIS FSSVMQLLTF YESVAIGPPK PEKLFRILDM
301: YEVLDDLLPE AEFLFQAGGN DMVLAEYHEV LLQLGESARK TFAEFKYAIQ SYTSSSAVPT GAVHPLTKYV MNYIKAVTVY SKTLDSLLKD ADQQPIPNSC
401: THFTATALHL QSVAAVLEAN LEAGSRLYRD CRLRNIFMMN NICYMVQKVK NSDLKSFLGD DWIRLHNRMF QHQATNYERA SWSQVLSYLS DDGLCAAGGA
501: ASRKIIREKF KNFNLSFEDV YRVQTAWSVP DDQLREDVRI SISLKVIQAY RTFVGRYSAF LDGTKQRDRY IKYRPEDLEE LLLDLFEGTQ KSLQHSGRA
101: EEFVYLLTYY KQPLEQELLS FRSTEDGSTD EFSSSSFSEE QSEGKSTQTG SSGGSEYFVA DLIQPGALSA VKSIANFMFL SDYNNECCQA YINARQGAID
201: EFIGSLHIDK HSIEELMSTK WNKLSASIKR WNRAMKAFVR VYLASERRLS SLVFGDLSET AVDLCFYEIS FSSVMQLLTF YESVAIGPPK PEKLFRILDM
301: YEVLDDLLPE AEFLFQAGGN DMVLAEYHEV LLQLGESARK TFAEFKYAIQ SYTSSSAVPT GAVHPLTKYV MNYIKAVTVY SKTLDSLLKD ADQQPIPNSC
401: THFTATALHL QSVAAVLEAN LEAGSRLYRD CRLRNIFMMN NICYMVQKVK NSDLKSFLGD DWIRLHNRMF QHQATNYERA SWSQVLSYLS DDGLCAAGGA
501: ASRKIIREKF KNFNLSFEDV YRVQTAWSVP DDQLREDVRI SISLKVIQAY RTFVGRYSAF LDGTKQRDRY IKYRPEDLEE LLLDLFEGTQ KSLQHSGRA
001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR
Arabidopsis Description
ATEXO70E1Exocyst subunit exo70 family protein E1 [Source:UniProtKB/TrEMBL;Acc:Q9LIA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.