Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G327400.1 | Wheat | plastid | 96.13 | 96.13 |
| TraesCS2A01G335400.1 | Wheat | plastid | 95.39 | 92.58 |
| HORVU2Hr1G081140.2 | Barley | plastid | 91.34 | 91.08 |
| OQU81723 | Sorghum | plastid | 70.05 | 72.73 |
| Zm00001d025633_P007 | Maize | plastid | 68.48 | 71.51 |
| Zm00001d025629_P007 | Maize | plastid | 68.48 | 71.51 |
| Os04t0464800-00 | Rice | plastid | 56.41 | 71.41 |
| Solyc08g044250.1.1 | Tomato | mitochondrion | 3.04 | 60.0 |
| PGSC0003DMT400069622 | Potato | cytosol | 12.53 | 54.18 |
| GSMUA_Achr10P... | Banana | plastid | 46.08 | 50.05 |
| CDY49049 | Canola | plastid | 42.21 | 46.93 |
| CDY37526 | Canola | plastid | 42.3 | 46.79 |
| Bra039123.1-P | Field mustard | plastid | 42.49 | 46.52 |
| AT3G01370.1 | Thale cress | plastid | 42.4 | 45.5 |
| VIT_14s0066g01910.t01 | Wine grape | cytosol | 43.78 | 45.5 |
| KRG93409 | Soybean | plastid | 41.29 | 43.62 |
| PGSC0003DMT400003527 | Potato | plastid | 40.55 | 41.94 |
| KRG93411 | Soybean | plastid | 37.88 | 39.75 |
| Solyc02g087250.2.1 | Tomato | extracellular | 41.01 | 35.29 |
| TraesCS4B01G161000.1 | Wheat | plastid | 26.27 | 33.41 |
| TraesCS1B01G396800.2 | Wheat | plastid | 24.06 | 32.95 |
| TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 21.01 | 31.28 |
| TraesCS5B01G190100.1 | Wheat | plastid | 22.12 | 24.67 |
| TraesCS7B01G128100.1 | Wheat | mitochondrion | 6.91 | 22.26 |
| TraesCS3B01G562100.1 | Wheat | mitochondrion | 7.65 | 20.96 |
| TraesCS2B01G367400.1 | Wheat | mitochondrion | 8.66 | 19.54 |
| TraesCS1B01G108100.1 | Wheat | mitochondrion | 8.11 | 14.43 |
Protein Annotations
| MapMan:16.12.2.1.2 | Gene3D:3.30.110.60 | ncoils:Coil | GO:GO:0000372 | GO:GO:0000373 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009532 | GO:GO:0009536 |
| GO:GO:0009987 | InterPro:IPR001890 | InterPro:IPR035920 | PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 |
| PANTHER:PTHR31846:SF16 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | EnsemblPlantsGene:TraesCS2B01G346500 | EnsemblPlants:TraesCS2B01G346500.1 |
| InterPro:YhbY_like_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:493251541..493259946
Molecular Weight (calculated)
120635.0 Da
IEP (calculated)
7.201
GRAVY (calculated)
-0.620
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLQFSPHPS PLILSLPVAT SRARHPHPRL PPVRASPSSE PELLAKSALR RISDKLRSLG YLETSPEPPI PAPAPSADAP SPGEIFVPTP AQLPRHRVGS
0101: TLDPSWATGD GEADAARRRQ RRGRDAAAAP TPPSAAELTL PRDELRRLQG VGIRLRKRLK VGKPGVTEGI VNGIHERWRN AELVKIRCDD ISAMNMRRTH
0201: EVLERKTGGL VIWRSGSTII LYRGTNYKYP YFHDQQKIDD CLKDESSEQS SSDDDDEDLG FLSVEQCSSE VDGKNHTEDS IHYEDEAVEN VAIVYGEQTS
0301: IGEEHENHDI LSVGQSVARK EDANYPMISS KVPVVDTQEG RSAVKINSGA ANKQHARFHI GTNVNPPSVV RPLARSTLVT GVGSPNKFRL QLPGEVKLAK
0401: DDDKLLDGLG PRFSEWWGYD PLPVDADLLP AIVPGFRRPF RLLPSGVPPK LTDREMTILR RLARPLPYHY ALGRSSNLQG LAASMIKLWE RCEVAKIAMK
0501: RGPYCIDSEL VSEELKDLTG GTLLSRDNES IVLYRGKDFL PPAVSLAIEK RRKHDNSMIN KPKPEIEESI PTQDASELEM ANDASVHGHE CHEEKHEGET
0601: SVIEYRTESL NTVAQNMETR LSQAIAEKKK AEKLLEELEK ASRPSKAETR ETISEEERYM LRKVGLQMKP FLLLGRRGVF DGTIENMHLH WKYRELVKII
0701: CKEHSTEDVT YAARTLEAES GGILVAVERV SKGHAIIMYR GKNYQRPSAL RPKSLLNKKD ALKRSVELQR HKSLKLHVLN LSKNIDYLRG QMQMEGHPVA
0801: LSDQMNPGHE NKGMHDLCDN SGTLGETSKE VPEVAPECFE PEGEECSSGG TNRTLNTTRS GVPLDDTQKK LCLNELKDDS SEASRPCLNG SSSTASSDNL
0901: IEYQNTLSFP VACHSDSGSE EDSKVFKTLS PSQALDELIL DQKHTPHLPS KATPLSNRER LVLRKQALQM KKRPVLAIGR NNVITGVAKT IRTHFKKHPL
1001: AIVNIKNRAD GTPVQQLISE LEEATGSVLV SREPNKVILY RGWGADVTQT SSREDRTNEG EKEVISPQLL EAIRLECGLH PGESQ
0101: TLDPSWATGD GEADAARRRQ RRGRDAAAAP TPPSAAELTL PRDELRRLQG VGIRLRKRLK VGKPGVTEGI VNGIHERWRN AELVKIRCDD ISAMNMRRTH
0201: EVLERKTGGL VIWRSGSTII LYRGTNYKYP YFHDQQKIDD CLKDESSEQS SSDDDDEDLG FLSVEQCSSE VDGKNHTEDS IHYEDEAVEN VAIVYGEQTS
0301: IGEEHENHDI LSVGQSVARK EDANYPMISS KVPVVDTQEG RSAVKINSGA ANKQHARFHI GTNVNPPSVV RPLARSTLVT GVGSPNKFRL QLPGEVKLAK
0401: DDDKLLDGLG PRFSEWWGYD PLPVDADLLP AIVPGFRRPF RLLPSGVPPK LTDREMTILR RLARPLPYHY ALGRSSNLQG LAASMIKLWE RCEVAKIAMK
0501: RGPYCIDSEL VSEELKDLTG GTLLSRDNES IVLYRGKDFL PPAVSLAIEK RRKHDNSMIN KPKPEIEESI PTQDASELEM ANDASVHGHE CHEEKHEGET
0601: SVIEYRTESL NTVAQNMETR LSQAIAEKKK AEKLLEELEK ASRPSKAETR ETISEEERYM LRKVGLQMKP FLLLGRRGVF DGTIENMHLH WKYRELVKII
0701: CKEHSTEDVT YAARTLEAES GGILVAVERV SKGHAIIMYR GKNYQRPSAL RPKSLLNKKD ALKRSVELQR HKSLKLHVLN LSKNIDYLRG QMQMEGHPVA
0801: LSDQMNPGHE NKGMHDLCDN SGTLGETSKE VPEVAPECFE PEGEECSSGG TNRTLNTTRS GVPLDDTQKK LCLNELKDDS SEASRPCLNG SSSTASSDNL
0901: IEYQNTLSFP VACHSDSGSE EDSKVFKTLS PSQALDELIL DQKHTPHLPS KATPLSNRER LVLRKQALQM KKRPVLAIGR NNVITGVAKT IRTHFKKHPL
1001: AIVNIKNRAD GTPVQQLISE LEEATGSVLV SREPNKVILY RGWGADVTQT SSREDRTNEG EKEVISPQLL EAIRLECGLH PGESQ
0001: MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
Arabidopsis Description
CFM2CRM-domain containing factor CFM2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.