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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G376400.1 Wheat plastid 86.99 96.5
TraesCS1D01G383500.1 Wheat mitochondrion, plastid 94.19 95.76
HORVU1Hr1G083550.4 Barley plasma membrane 93.56 95.61
Os05t0551900-00 Rice plastid 79.67 80.69
KXG22496 Sorghum plastid 78.91 78.03
Zm00001d038922_P001 Maize extracellular 76.89 76.6
CDX95528 Canola cytosol 36.87 61.73
CDX92233 Canola cytosol 7.7 61.62
GSMUA_Achr3P26360_001 Banana plastid 59.6 61.46
VIT_17s0000g03610.t01 Wine grape plastid 57.45 54.82
Solyc03g119450.2.1 Tomato nucleus 55.93 54.02
CDY18518 Canola plastid 54.8 53.85
PGSC0003DMT400014644 Potato plastid 55.81 53.64
KRH48490 Soybean nucleus 53.28 53.35
KRH39182 Soybean plastid 52.9 52.97
Bra037586.1-P Field mustard plastid 54.42 52.75
CDX75965 Canola plastid 55.93 52.74
CDY51940 Canola plastid 55.81 52.68
Bra001704.1-P Field mustard plastid 55.81 52.62
KRH41639 Soybean mitochondrion, plastid 48.11 52.41
AT3G18390.1 Thale cress plastid 55.56 51.89
Bra022317.1-P Field mustard cytosol, endoplasmic reticulum 8.96 46.71
CDX95529 Canola plastid 15.53 40.59
TraesCS7B01G481800.1 Wheat cytosol, plastid 30.56 33.2
TraesCS4B01G161000.1 Wheat plastid 35.35 32.83
TraesCS5B01G190100.1 Wheat plastid 33.59 27.34
TraesCS7B01G128100.1 Wheat mitochondrion 11.62 27.3
TraesCS2B01G346500.1 Wheat plastid 32.95 24.06
TraesCS2B01G367400.1 Wheat mitochondrion 11.99 19.75
TraesCS3B01G562100.1 Wheat mitochondrion 9.85 19.7
TraesCS1B01G108100.1 Wheat mitochondrion 10.48 13.61
Protein Annotations
Gene3D:3.30.110.60MapMan:35.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0009507GO:GO:0009536GO:GO:0009719GO:GO:0009737InterPro:IPR001890InterPro:IPR035920
PFAM:PF01985PFscan:PS51295PANTHER:PTHR31846PANTHER:PTHR31846:SF4InterPro:RNA-binding_CRMSMART:SM01103
SUPFAM:SSF75471EnsemblPlantsGene:TraesCS1B01G396800EnsemblPlants:TraesCS1B01G396800.2InterPro:YhbY_like_sfSEG:seg:
Description
No Description!
Coordinates
chr1B:-:628514632..628518676
Molecular Weight (calculated)
88543.8 Da
IEP (calculated)
8.872
GRAVY (calculated)
-0.547
Length
792 amino acids
Sequence
(BLAST)
001: MALSELPLHH SFRLSSRPLL PLRLLSLSRP ASSSASPTAA AAAPSSSGRN RAPPAPSRGG APWMQKWAPA DPSAPAPAPS PGHAPSTSID RIVHRLRNLG
101: LGTDDDEPSS PADAPLDGRE RLGDLLDRSW ARPDRQFAAS GLDEAVLPWE RDRESDGEEA DGVKRKRVRA PSLAELTMDD VELRRLRGMG MTLKDRITVP
201: KAGVTQAITE KIHDAWRKSE LVRLKFHEDL ANDMKTAHEL VERRTGGLII WRAGSVMVVY RGSNYTRPLK SQPLDGTSSP RKGEDSTLFI PDGSSTAEND
301: NQGKDLTAQH DNAPILDLHN TEDMTEEELE FNQMLDELGP RFVDWWGTGI LPVDADLLPQ TIPGYKAPFR VLPTGMRTSL TNSELTNLRK LARNLPCHFA
401: LGRNRNHQGL AAAIVKLWEK SLVVKIAVKR GIQNTNNKLM SDEIKNLTGG TLLLRNKYYI VIYRGKDFLP TSVAAALAER EELTKDIQNL EEQRRSISIE
501: HSPEDGFDGH ALVGTLAEFQ EAQARWGRNV TSKEQQEMKE ASFRSEKEKL FRRLEHKLSI AQAKIHRAGK LLSKIEASMV LANPSDDREM ITAEERSVFR
601: RIGLKMKAYL PVGIRGVFDG VIENMHLHWK HREVVKLITK QKTLAFVEET ARLLEYESGG ILVAIERVPK GHALIFYRGK NYRRPINIRP RNLLTKAKAL
701: KRAVAMQRHE ALSQHIDQLE INMKKMKRDL GMEDYDEEDE DGSGSESEDD TAGYDEVIIT YPIVSCLPST SCSSVNDVLM FTRNKLGYGG LR
Best Arabidopsis Sequence Match ( AT3G18390.1 )
(BLAST)
001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
Arabidopsis Description
EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.