Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G376400.1 | Wheat | plastid | 86.99 | 96.5 |
TraesCS1D01G383500.1 | Wheat | mitochondrion, plastid | 94.19 | 95.76 |
HORVU1Hr1G083550.4 | Barley | plasma membrane | 93.56 | 95.61 |
Os05t0551900-00 | Rice | plastid | 79.67 | 80.69 |
KXG22496 | Sorghum | plastid | 78.91 | 78.03 |
Zm00001d038922_P001 | Maize | extracellular | 76.89 | 76.6 |
CDX95528 | Canola | cytosol | 36.87 | 61.73 |
CDX92233 | Canola | cytosol | 7.7 | 61.62 |
GSMUA_Achr3P26360_001 | Banana | plastid | 59.6 | 61.46 |
VIT_17s0000g03610.t01 | Wine grape | plastid | 57.45 | 54.82 |
Solyc03g119450.2.1 | Tomato | nucleus | 55.93 | 54.02 |
CDY18518 | Canola | plastid | 54.8 | 53.85 |
PGSC0003DMT400014644 | Potato | plastid | 55.81 | 53.64 |
KRH48490 | Soybean | nucleus | 53.28 | 53.35 |
KRH39182 | Soybean | plastid | 52.9 | 52.97 |
Bra037586.1-P | Field mustard | plastid | 54.42 | 52.75 |
CDX75965 | Canola | plastid | 55.93 | 52.74 |
CDY51940 | Canola | plastid | 55.81 | 52.68 |
Bra001704.1-P | Field mustard | plastid | 55.81 | 52.62 |
KRH41639 | Soybean | mitochondrion, plastid | 48.11 | 52.41 |
AT3G18390.1 | Thale cress | plastid | 55.56 | 51.89 |
Bra022317.1-P | Field mustard | cytosol, endoplasmic reticulum | 8.96 | 46.71 |
CDX95529 | Canola | plastid | 15.53 | 40.59 |
TraesCS7B01G481800.1 | Wheat | cytosol, plastid | 30.56 | 33.2 |
TraesCS4B01G161000.1 | Wheat | plastid | 35.35 | 32.83 |
TraesCS5B01G190100.1 | Wheat | plastid | 33.59 | 27.34 |
TraesCS7B01G128100.1 | Wheat | mitochondrion | 11.62 | 27.3 |
TraesCS2B01G346500.1 | Wheat | plastid | 32.95 | 24.06 |
TraesCS2B01G367400.1 | Wheat | mitochondrion | 11.99 | 19.75 |
TraesCS3B01G562100.1 | Wheat | mitochondrion | 9.85 | 19.7 |
TraesCS1B01G108100.1 | Wheat | mitochondrion | 10.48 | 13.61 |
Protein Annotations
Gene3D:3.30.110.60 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009719 | GO:GO:0009737 | InterPro:IPR001890 | InterPro:IPR035920 |
PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF4 | InterPro:RNA-binding_CRM | SMART:SM01103 |
SUPFAM:SSF75471 | EnsemblPlantsGene:TraesCS1B01G396800 | EnsemblPlants:TraesCS1B01G396800.2 | InterPro:YhbY_like_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:-:628514632..628518676
Molecular Weight (calculated)
88543.8 Da
IEP (calculated)
8.872
GRAVY (calculated)
-0.547
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSELPLHH SFRLSSRPLL PLRLLSLSRP ASSSASPTAA AAAPSSSGRN RAPPAPSRGG APWMQKWAPA DPSAPAPAPS PGHAPSTSID RIVHRLRNLG
101: LGTDDDEPSS PADAPLDGRE RLGDLLDRSW ARPDRQFAAS GLDEAVLPWE RDRESDGEEA DGVKRKRVRA PSLAELTMDD VELRRLRGMG MTLKDRITVP
201: KAGVTQAITE KIHDAWRKSE LVRLKFHEDL ANDMKTAHEL VERRTGGLII WRAGSVMVVY RGSNYTRPLK SQPLDGTSSP RKGEDSTLFI PDGSSTAEND
301: NQGKDLTAQH DNAPILDLHN TEDMTEEELE FNQMLDELGP RFVDWWGTGI LPVDADLLPQ TIPGYKAPFR VLPTGMRTSL TNSELTNLRK LARNLPCHFA
401: LGRNRNHQGL AAAIVKLWEK SLVVKIAVKR GIQNTNNKLM SDEIKNLTGG TLLLRNKYYI VIYRGKDFLP TSVAAALAER EELTKDIQNL EEQRRSISIE
501: HSPEDGFDGH ALVGTLAEFQ EAQARWGRNV TSKEQQEMKE ASFRSEKEKL FRRLEHKLSI AQAKIHRAGK LLSKIEASMV LANPSDDREM ITAEERSVFR
601: RIGLKMKAYL PVGIRGVFDG VIENMHLHWK HREVVKLITK QKTLAFVEET ARLLEYESGG ILVAIERVPK GHALIFYRGK NYRRPINIRP RNLLTKAKAL
701: KRAVAMQRHE ALSQHIDQLE INMKKMKRDL GMEDYDEEDE DGSGSESEDD TAGYDEVIIT YPIVSCLPST SCSSVNDVLM FTRNKLGYGG LR
101: LGTDDDEPSS PADAPLDGRE RLGDLLDRSW ARPDRQFAAS GLDEAVLPWE RDRESDGEEA DGVKRKRVRA PSLAELTMDD VELRRLRGMG MTLKDRITVP
201: KAGVTQAITE KIHDAWRKSE LVRLKFHEDL ANDMKTAHEL VERRTGGLII WRAGSVMVVY RGSNYTRPLK SQPLDGTSSP RKGEDSTLFI PDGSSTAEND
301: NQGKDLTAQH DNAPILDLHN TEDMTEEELE FNQMLDELGP RFVDWWGTGI LPVDADLLPQ TIPGYKAPFR VLPTGMRTSL TNSELTNLRK LARNLPCHFA
401: LGRNRNHQGL AAAIVKLWEK SLVVKIAVKR GIQNTNNKLM SDEIKNLTGG TLLLRNKYYI VIYRGKDFLP TSVAAALAER EELTKDIQNL EEQRRSISIE
501: HSPEDGFDGH ALVGTLAEFQ EAQARWGRNV TSKEQQEMKE ASFRSEKEKL FRRLEHKLSI AQAKIHRAGK LLSKIEASMV LANPSDDREM ITAEERSVFR
601: RIGLKMKAYL PVGIRGVFDG VIENMHLHWK HREVVKLITK QKTLAFVEET ARLLEYESGG ILVAIERVPK GHALIFYRGK NYRRPINIRP RNLLTKAKAL
701: KRAVAMQRHE ALSQHIDQLE INMKKMKRDL GMEDYDEEDE DGSGSESEDD TAGYDEVIIT YPIVSCLPST SCSSVNDVLM FTRNKLGYGG LR
001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
Arabidopsis Description
EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.