Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G376400.1 | Wheat | plastid | 89.73 | 97.9 |
| HORVU1Hr1G083550.4 | Barley | plasma membrane | 96.02 | 96.52 |
| TraesCS1B01G396800.2 | Wheat | plastid | 95.76 | 94.19 |
| Os05t0551900-00 | Rice | plastid | 79.33 | 79.03 |
| KXG22496 | Sorghum | plastid | 79.46 | 77.28 |
| Zm00001d038922_P001 | Maize | extracellular | 77.79 | 76.23 |
| CDX95528 | Canola | cytosol | 37.61 | 61.95 |
| CDX92233 | Canola | cytosol | 7.83 | 61.62 |
| GSMUA_Achr3P26360_001 | Banana | plastid | 59.95 | 60.81 |
| VIT_17s0000g03610.t01 | Wine grape | plastid | 58.54 | 54.94 |
| Solyc03g119450.2.1 | Tomato | nucleus | 56.74 | 53.9 |
| CDY18518 | Canola | plastid | 55.58 | 53.72 |
| PGSC0003DMT400014644 | Potato | plastid | 56.48 | 53.4 |
| KRH48490 | Soybean | nucleus | 54.04 | 53.22 |
| CDX75965 | Canola | plastid | 57.0 | 52.86 |
| KRH39182 | Soybean | plastid | 53.53 | 52.72 |
| CDY51940 | Canola | plastid | 56.74 | 52.68 |
| Bra037586.1-P | Field mustard | plastid | 55.2 | 52.63 |
| Bra001704.1-P | Field mustard | plastid | 56.74 | 52.62 |
| KRH41639 | Soybean | mitochondrion, plastid | 48.65 | 52.13 |
| AT3G18390.1 | Thale cress | plastid | 56.74 | 52.12 |
| Bra022317.1-P | Field mustard | cytosol, endoplasmic reticulum | 9.24 | 47.37 |
| CDX95529 | Canola | plastid | 15.28 | 39.27 |
| TraesCS7D01G553500.1 | Wheat | plastid | 31.19 | 33.33 |
| TraesCS4D01G150700.1 | Wheat | plastid | 36.33 | 33.22 |
| TraesCS7D01G222900.1 | Wheat | mitochondrion | 11.81 | 27.38 |
| TraesCS5D01G197600.1 | Wheat | plastid | 29.4 | 25.33 |
| TraesCS2D01G327400.1 | Wheat | plastid | 32.61 | 23.41 |
| TraesCS3D01G505800.1 | Wheat | mitochondrion | 10.27 | 20.36 |
| TraesCS2D01G347400.2 | Wheat | mitochondrion, nucleus, plastid | 12.32 | 16.67 |
| TraesCS1D01G090300.1 | Wheat | mitochondrion | 11.3 | 14.45 |
Protein Annotations
| Gene3D:3.30.110.60 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009719 | GO:GO:0009737 | InterPro:IPR001890 | InterPro:IPR035920 |
| PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 | PANTHER:PTHR31846:SF4 | InterPro:RNA-binding_CRM | SMART:SM01103 |
| SUPFAM:SSF75471 | EnsemblPlantsGene:TraesCS1D01G383500 | EnsemblPlants:TraesCS1D01G383500.1 | InterPro:YhbY_like_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:458116935..458121267
Molecular Weight (calculated)
86440.5 Da
IEP (calculated)
6.575
GRAVY (calculated)
-0.646
Length
779 amino acids
Sequence
(BLAST)
(BLAST)
001: MAXXXXXXXX SFRLSSRPLL PLRLLSLSRP ASSSASPTAA AAAAPSSSGR NRAPPAPSRG GAPWMQKWAP ADPSAPAPAP APSPGHAPST SIDRIVHRLR
101: NLGLGTDDDE PSSPADAPLD GRERLGDLLD RSWARPDRQF AASGLDEAVL PWERDRESDG EEVDGVKRKR VRAPSLAELT MDDVELRRLR GMGMTLKDRI
201: TVPKAGVTQA ITEKIHDAWR KSELVRLKFH EDLANDMKTA HELVERRTGG LIIWRAGSVM VVYRGSNYTR PLKSQPFDGT SSPRKGEDST LFIPDGSSTA
301: ENDNQGKDLT AQHDNAPILD LHNTEDMTEE ELEFNQMLDE LGPRFVDWWG TGILPVDADL LPQTIPGYKA PFRVLPTGMR TSLTNSELTN LRKLARNLPC
401: HFALGRNRNH QGLAAAIVKL WEKSLVVKIA VKRGIQNTNN KLMSDEIKNL TGGTLLLRNK YYIVIYRGKD FLPTSVAAAL AEREELTKDI QNLEEQRRSI
501: SIEHSSEDGF DGHALVGTLA EFQEAQARWG RNVTSKEQQE MKEASFRSEK EKLFRRLEHK LSIAQAKIHR AGKLLSKIEA SMILANPSDD REMITAEERS
601: VFRRIGLKMK AYLPVGIRGV FDGVIENMHL HWKHREVVKL ITKQKTLAFV EETARLLEYE SGGILVAIER VPKGHALIFY RGKNYRRPIN IRPRNLLTKA
701: KALKRAVAMQ RHEALSQHIE QLEINMKKMK RDLGMEDYDE EDEDGSGSES EDDTTGYDEG MEDYDKEEED ESDSEDEDN
101: NLGLGTDDDE PSSPADAPLD GRERLGDLLD RSWARPDRQF AASGLDEAVL PWERDRESDG EEVDGVKRKR VRAPSLAELT MDDVELRRLR GMGMTLKDRI
201: TVPKAGVTQA ITEKIHDAWR KSELVRLKFH EDLANDMKTA HELVERRTGG LIIWRAGSVM VVYRGSNYTR PLKSQPFDGT SSPRKGEDST LFIPDGSSTA
301: ENDNQGKDLT AQHDNAPILD LHNTEDMTEE ELEFNQMLDE LGPRFVDWWG TGILPVDADL LPQTIPGYKA PFRVLPTGMR TSLTNSELTN LRKLARNLPC
401: HFALGRNRNH QGLAAAIVKL WEKSLVVKIA VKRGIQNTNN KLMSDEIKNL TGGTLLLRNK YYIVIYRGKD FLPTSVAAAL AEREELTKDI QNLEEQRRSI
501: SIEHSSEDGF DGHALVGTLA EFQEAQARWG RNVTSKEQQE MKEASFRSEK EKLFRRLEHK LSIAQAKIHR AGKLLSKIEA SMILANPSDD REMITAEERS
601: VFRRIGLKMK AYLPVGIRGV FDGVIENMHL HWKHREVVKL ITKQKTLAFV EETARLLEYE SGGILVAIER VPKGHALIFY RGKNYRRPIN IRPRNLLTKA
701: KALKRAVAMQ RHEALSQHIE QLEINMKKMK RDLGMEDYDE EDEDGSGSES EDDTTGYDEG MEDYDKEEED ESDSEDEDN
001: MALAPLNFTE MPLRSSLPLT SSSRYCSSPS LHALLFYSLG VKPSRQQIVR PFSSLRTSER SNNRSNNNRR LDQRNHKPTP PWIDKWPPSS SGAGGDHAGK
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
101: KGGENNGGDR IRSAEEEAEA KLRYLEKDKG QNAIERIVLR LRNLGLGSDD EDDVEDDEGG GINGGDVKPV TGEERLGDLL KREWVRPDMM LAEGEESEEE
201: DEVLLPWEKN EEEQAAERVV GEGGVAVMQK RRARAPSLAE LTVEDSELRR LRRDGMYLRV RINIPKAGLT QAVMEKIYDT WRKEELVRLK FHEVLARDMK
301: TAHEIVERRT GGMVIWRAGS VMVVYRGLDY KGPPVISNQM AGPKETLFVP DVSSAGDEAT NAKDNQSAPL VIKDPIIKNP IRKENMTEEE VEFNSLLDSL
401: GPRFQEWWGT GVLPVDADLL PPTIPGYKTP FRLLPTGMRS NLTNAEMTNL RKIGKTLPCH FALGRNRNHQ GLAAAILQIW EKSLIAKIAV KRGIQNTNNK
501: LMADEVKTLT GGVLLLRNKY YIVIYRGKDF LPSSVAATLA ERQELTKEIQ DVEERVRNRE IEAVQPVGDK VPAEAGTLAE FYEAQARWGK EITPDHREKM
601: IEEASRVANA RVVKRIQHKL NLAQSKFQRA EKLLSKIEAS MIPNGPDYDQ EVISEEERAM FRKVGLKMKA YLPIGIRGVF DGVIENMHLH WKHRELVKLI
701: SKQKNQAFVE ETARLLEYES GGVLVAIEKV PKGFALIYYR GKNYRRPISL RPRNLLTKAK ALKRSIAMQR HEALSQHISE LERTIEQMQS QLTSKNPSYS
801: ESEWENDEDD DDDEEEEKDD VEDNESDWDE TDGESAISSI EEADMSSR
Arabidopsis Description
EMB1865CRS1 / YhbY (CRM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9LS51]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.