Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G346500.1 | Wheat | plastid | 96.13 | 96.13 |
| TraesCS2A01G335400.1 | Wheat | plastid | 95.02 | 92.22 |
| HORVU2Hr1G081140.2 | Barley | plastid | 91.06 | 90.81 |
| OQU81723 | Sorghum | plastid | 69.03 | 71.67 |
| Os04t0464800-00 | Rice | plastid | 56.04 | 70.95 |
| Zm00001d025633_P007 | Maize | plastid | 67.74 | 70.74 |
| Zm00001d025629_P007 | Maize | plastid | 67.74 | 70.74 |
| Solyc08g044250.1.1 | Tomato | mitochondrion | 3.04 | 60.0 |
| PGSC0003DMT400069622 | Potato | cytosol | 12.53 | 54.18 |
| GSMUA_Achr10P... | Banana | plastid | 45.99 | 49.95 |
| CDY49049 | Canola | plastid | 41.94 | 46.62 |
| CDY37526 | Canola | plastid | 41.94 | 46.38 |
| Bra039123.1-P | Field mustard | plastid | 42.12 | 46.12 |
| VIT_14s0066g01910.t01 | Wine grape | cytosol | 43.78 | 45.5 |
| AT3G01370.1 | Thale cress | plastid | 42.03 | 45.1 |
| KRG93409 | Soybean | plastid | 41.01 | 43.33 |
| PGSC0003DMT400003527 | Potato | plastid | 40.37 | 41.75 |
| KRG93411 | Soybean | plastid | 37.79 | 39.65 |
| Solyc02g087250.2.1 | Tomato | extracellular | 40.83 | 35.13 |
| TraesCS4D01G150700.1 | Wheat | plastid | 26.08 | 33.22 |
| TraesCS1D01G383500.1 | Wheat | mitochondrion, plastid | 23.41 | 32.61 |
| TraesCS7D01G553500.1 | Wheat | plastid | 20.55 | 30.59 |
| TraesCS5D01G197600.1 | Wheat | plastid | 18.99 | 22.79 |
| TraesCS7D01G222900.1 | Wheat | mitochondrion | 7.0 | 22.62 |
| TraesCS3D01G505800.1 | Wheat | mitochondrion | 7.74 | 21.37 |
| TraesCS2D01G347400.2 | Wheat | mitochondrion, nucleus, plastid | 8.85 | 16.67 |
| TraesCS1D01G090300.1 | Wheat | mitochondrion | 8.11 | 14.45 |
Protein Annotations
| MapMan:16.12.2.1.2 | Gene3D:3.30.110.60 | ncoils:Coil | GO:GO:0000372 | GO:GO:0000373 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009532 | GO:GO:0009536 |
| GO:GO:0009987 | InterPro:IPR001890 | InterPro:IPR035920 | PFAM:PF01985 | PFscan:PS51295 | PANTHER:PTHR31846 |
| PANTHER:PTHR31846:SF16 | InterPro:RNA-binding_CRM | SMART:SM01103 | SUPFAM:SSF75471 | EnsemblPlantsGene:TraesCS2D01G327400 | EnsemblPlants:TraesCS2D01G327400.1 |
| InterPro:YhbY_like_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:420583682..420592269
Molecular Weight (calculated)
120522.0 Da
IEP (calculated)
7.111
GRAVY (calculated)
-0.590
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLQFSPHPS PLILSLPVAT SRAGHPHPRL PPVRASPSSE PELLAKSALR RISDKLRSLG YLEASPETPV PAPAPSADAP SPGEIFVPTP AQLPRHRVGS
0101: TLDPSWATGD GEADAARRRQ RRGRDAAAPP TPPSAAELTL PRDELRRLQG VGIRLRKRLK VGKPGVTEGI VNGIHERWRN AELVKIRCDD ISAMNMRRTH
0201: EVLERKTGGL VIWRSGSTII LYRGTNYKYP YFHDQQKMDD CLKDESSEQS SSDDDDEDLG FLSVEQCSSE VDGKNHTEDS IHYEDEAVVN VAIVYGEQRS
0301: IGEEHENHDM LSVGQSVARK EDANYPMISS KAPVVDTQEG RSAVKINSGA ANKQHARFHI GTNVNPPSVV RPLARSTLVT GVGSPNKFRL QLPGEVKLAK
0401: DDDKLLDGLG PRFSEWWGYD PLPVDADLLP AIVPGFRRPF RLLPSGVPPK LTDREMTILR RLARPLPYHY ALGRSSNLQG LAASMIKLWE RCEVAKIAMK
0501: RGPYCIDSEL VSEELKGLTG GTLLSRDNES IVLYRGKDFL PPAVSLAIEK RRKHDNSVIN KPKPEIEESI PTQDASELKM ANDASVHGHE CHEEKHEGET
0601: SVTEYITESL NTVAENMETR LYQAIAEKKK AEKLLEELEK ASWPSKAETR EAISEEERYM LRKVGLQMKP FLLLGRRGVF DGTIENMHLH WKYRELVKII
0701: CKEHSMEDVT YAARTLEAES GGILVAVERV SKGHAIIMYR GKNYQRPSAL RPKSLLNKKD ALKRSVELQR HKSLKLHVLN LSKNIDYLRG QMQTEGHPVA
0801: LSNQMNSGHE NKGMHDLCDN SGTSGETSKE VPEVAPECFE PEGEECSSGG TNRILNTTRT GVPLDDTQKK LCLNELKDDS SEALRPCLIE SSSTASSDNQ
0901: IEYQNRLSFP VECHSDSGSE EDSKVFKTLS PSQALDEPIL VQTYTPHLPS KAAPLSNRER LVLRKQALQV KKRPVLAIGR NNVITGVAKT IRTHFKKHPL
1001: AVVNIKNRAD GTPVQQLISE LEEATGSVLV SREPNKVILY RGWGADVTET SSREDSTIEG EKEVISPQLL EAIRLECGLH PGESQ
0101: TLDPSWATGD GEADAARRRQ RRGRDAAAPP TPPSAAELTL PRDELRRLQG VGIRLRKRLK VGKPGVTEGI VNGIHERWRN AELVKIRCDD ISAMNMRRTH
0201: EVLERKTGGL VIWRSGSTII LYRGTNYKYP YFHDQQKMDD CLKDESSEQS SSDDDDEDLG FLSVEQCSSE VDGKNHTEDS IHYEDEAVVN VAIVYGEQRS
0301: IGEEHENHDM LSVGQSVARK EDANYPMISS KAPVVDTQEG RSAVKINSGA ANKQHARFHI GTNVNPPSVV RPLARSTLVT GVGSPNKFRL QLPGEVKLAK
0401: DDDKLLDGLG PRFSEWWGYD PLPVDADLLP AIVPGFRRPF RLLPSGVPPK LTDREMTILR RLARPLPYHY ALGRSSNLQG LAASMIKLWE RCEVAKIAMK
0501: RGPYCIDSEL VSEELKGLTG GTLLSRDNES IVLYRGKDFL PPAVSLAIEK RRKHDNSVIN KPKPEIEESI PTQDASELKM ANDASVHGHE CHEEKHEGET
0601: SVTEYITESL NTVAENMETR LYQAIAEKKK AEKLLEELEK ASWPSKAETR EAISEEERYM LRKVGLQMKP FLLLGRRGVF DGTIENMHLH WKYRELVKII
0701: CKEHSMEDVT YAARTLEAES GGILVAVERV SKGHAIIMYR GKNYQRPSAL RPKSLLNKKD ALKRSVELQR HKSLKLHVLN LSKNIDYLRG QMQTEGHPVA
0801: LSNQMNSGHE NKGMHDLCDN SGTSGETSKE VPEVAPECFE PEGEECSSGG TNRILNTTRT GVPLDDTQKK LCLNELKDDS SEALRPCLIE SSSTASSDNQ
0901: IEYQNRLSFP VECHSDSGSE EDSKVFKTLS PSQALDEPIL VQTYTPHLPS KAAPLSNRER LVLRKQALQV KKRPVLAIGR NNVITGVAKT IRTHFKKHPL
1001: AVVNIKNRAD GTPVQQLISE LEEATGSVLV SREPNKVILY RGWGADVTET SSREDSTIEG EKEVISPQLL EAIRLECGLH PGESQ
0001: MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
0101: LPKQLPIHRV GHTIDTSWST PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAELTLPPAE LRRLRTVGIR LTKKLKIGKA GITEGIVNGI
0201: HERWRTTEVV KIFCEDISRM NMKRTHDVLE TKTGGLVIWR SGSKILLYRG VNYQYPYFVS DRDLAHEAAS GASSMDQGVV DSREKQSIAE SSAPSITNKM
0301: VKPMLTQGVG SPDKVRFQLP GEVQLVEEAD RLLEGLGPRF TDWWAYDPLP VDGDLLPAVV PDYRRPFRLL PYGVSPKLTD DEMTTIRRLG RPLPCHFALG
0401: RNRNLQGLAV AIVKLWEKCE LAKIAVKRGV QNTNSELMAE ELKWLTGGTL ISRDKDFIVL YRGKDFLPSA VSSAIEERRR QTMIMENSSV HGNKLTENEE
0501: EIKPRAVKED IELEAKDQKD HIQTHQMKSR QRNSPEAILE KTSMKLSMAL EKKANAEKVL ADLENRESPQ LSDIDKEGIT NDEKYMLRKI GLKMKPFLLL
0601: GRRGVFDGTI ENMHLHWKYR ELVKIICNEY SIEAAHKVAE ILEAESGGIL VAVEMVSKGY AIIVYRGKNY ERPQCLRPQT LLSKREALKR SVEAQRRKSL
0701: KLHVLKLSNN IEELNRQLVE DSATNETWSD GESSNMMVEE ETENQHTEPE KAREKIELGY SSDLSVPSSG EENWEDDSEG EVDPLTTSSQ EYQEDESESA
0801: SSQRHEGNSL DSTANLSVFA ETGSANASSF HDRSLPHNSF LNANRKLPGS STGSGSQISA LRERKSENDG LVTDLSNRER LILRKQALKM KKRPPFAVGR
0901: SNVVTGLART LKMHFQKNPL AIVNVKGRAN GTSVQEVIAK LKEETGALLV SQEPSKVILY RGWGAEEEMK SFYPNNNVKS SINLPSTRSF VDDPPHVSPA
1001: LIEAIRLECG L
Arabidopsis Description
CFM2CRM-domain containing factor CFM2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.