Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G015500.1 | Wheat | golgi | 98.78 | 98.6 |
| TraesCSU01G044500.2 | Wheat | unclear | 98.88 | 98.23 |
| HORVU3Hr1G002280.1 | Barley | plastid | 96.26 | 91.06 |
| Os08t0301500-01 | Rice | plasma membrane | 87.46 | 87.71 |
| Zm00001d050125_P002 | Maize | nucleus | 84.28 | 85.08 |
| OQU78428 | Sorghum | nucleus | 85.13 | 85.05 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 72.78 | 73.47 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 72.87 | 73.42 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 68.38 | 69.49 |
| CDX92473 | Canola | cytosol | 62.68 | 69.36 |
| CDY35815 | Canola | cytosol | 62.58 | 69.25 |
| PGSC0003DMT400071807 | Potato | cytosol | 67.63 | 68.6 |
| Solyc07g007790.2.1 | Tomato | cytosol | 67.45 | 68.41 |
| KRH03629 | Soybean | endoplasmic reticulum | 67.07 | 67.71 |
| KRH20178 | Soybean | nucleus | 66.98 | 67.61 |
| CDY45096 | Canola | cytosol | 61.37 | 67.49 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 66.7 | 67.39 |
| Bra002289.1-P | Field mustard | cytosol | 65.58 | 67.27 |
| AT5G20280.1 | Thale cress | cytosol | 65.48 | 67.11 |
| CDX88168 | Canola | nucleus | 60.24 | 67.08 |
| CDX80498 | Canola | cytosol | 60.52 | 66.91 |
| CDX70382 | Canola | cytosol | 60.06 | 66.74 |
| Bra020096.1-P | Field mustard | cytosol | 63.05 | 65.44 |
| Bra009830.1-P | Field mustard | nucleus | 63.89 | 65.23 |
| AT5G11110.1 | Thale cress | cytosol | 63.7 | 65.04 |
| CDX78411 | Canola | cytosol | 63.14 | 64.97 |
| Bra006090.1-P | Field mustard | cytosol | 63.05 | 64.87 |
| Solyc08g042000.2.1 | Tomato | nucleus | 62.21 | 63.64 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 57.72 | 63.54 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 57.16 | 63.38 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 25.73 | 52.68 |
| TraesCS3D01G420300.1 | Wheat | nucleus | 52.57 | 52.47 |
| TraesCS4D01G088200.1 | Wheat | cytosol, golgi, unclear | 48.18 | 48.82 |
| TraesCS4D01G169800.1 | Wheat | cytosol | 16.0 | 21.14 |
| TraesCS7D01G036600.2 | Wheat | golgi | 15.53 | 20.37 |
| TraesCS7D01G159800.1 | Wheat | mitochondrion | 15.44 | 19.98 |
| TraesCS2D01G175600.1 | Wheat | golgi, unclear | 15.34 | 19.71 |
| TraesCS2D01G403600.1 | Wheat | cytosol | 15.06 | 18.59 |
| TraesCS7D01G552800.1 | Wheat | cytosol | 14.97 | 18.58 |
| TraesCS6D01G403800.1 | Wheat | cytosol | 15.06 | 18.57 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 |
| GO:GO:0046524 | InterPro:Glyco_trans_1 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF334 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln |
| TIGRFAMs:TIGR02468 | EnsemblPlantsGene:TraesCS3D01G013000 | EnsemblPlants:TraesCS3D01G013000.1 | TIGR:cd03800 | TIGR:cd16419 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:4486871..4494230
Molecular Weight (calculated)
118821.0 Da
IEP (calculated)
6.050
GRAVY (calculated)
-0.445
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVGNDWINSY LEAILDAGGA AGEISAASAA PGGSAAEKRR DKSSLMLRER GRFNPARYFV EEVISGFDET DLYKTWVRTS AMRSPQERNT RLENMSWRIW
0101: NLARKKKQIE GEEASRSSKK RLEREKARRD AAADLSEDLS DGEKGEHINE SSIHAESTRG HMPRIGSTDA IDVWANQHKD KKLYIVLISI HGLIRGENME
0201: LGRDSDTGGQ VKYVVELARA LGETPGVYRV DLLTRQISAP DVDWSYGEPT EMLSPRNSEN LGDDMGESSG AYIVRIPFGP REKYIPKEQL WPHIQEFVDG
0301: ALVHIMQMSK VLGEQVGNGQ PVWPVVIHGH YADAGDSAAL LSGALNVPMV FTGHSLGRDK LEQLLKQGRQ TRDEIDATYK IMRRIEAEEL CLDASEIVIT
0401: STRQEIDKQW GLYNGFDVIM ERKLRARIKR GVSCYGREMP RMIPIPPGME FSHIVPHDVD LDSEEANEVG SDSPDPPVWA DIMRFFSNPR KPMILALARP
0501: DPKKNITTLV KAFGEHHELR NLANLTLIMG NRDVIDEMSS TNGAVLTSVL KLIDKYDLYG QVAYPKHHKQ SEVPDIYRLA ARTKGVFINC AYIEPFGLTL
0601: IEAAAYGLPM VATQNGGPVD IHRVLDNGIL VDPHNQNDIA EALYRLVSDK QLWAKCRQNG LDNIHRFSWP EHCKNYLSRV GTLKSRHPQW QKSDDATEVS
0701: ETDSPGDSLR DIHDISLNLK ISLDSEKSGS MSKYGRSSTS DRRNLEDAVQ KFSEAVSAGT KDESGEKAGA TTGSTKWPSL RRRKHIVVIA VDSVQDADLV
0801: QIIKNIFQAS SKEKSSGALG FVLSTSRAAS EIHPLLTSGG IEITDFDAFI CSSGSDLCYP SSNSEDMLSP AELPFMIDLD YHSQIQYRWG GEGLRKTLIR
0901: WAAEKNSESG QEAVVEDDEC SSTYCISFKV KNTEAVPPVK DLRKTMRIQA LRCHVLYSHD GSKLNFIPVL ASRSQALRYL YIRWGVELSN MTVVVGESGD
1001: TDYEGLLGGV QKTIILKGSF NSAPNQLHAA RSYSLEDVVS FDKPGIASVD GYAPDILKSA LQQFGALEG
0101: NLARKKKQIE GEEASRSSKK RLEREKARRD AAADLSEDLS DGEKGEHINE SSIHAESTRG HMPRIGSTDA IDVWANQHKD KKLYIVLISI HGLIRGENME
0201: LGRDSDTGGQ VKYVVELARA LGETPGVYRV DLLTRQISAP DVDWSYGEPT EMLSPRNSEN LGDDMGESSG AYIVRIPFGP REKYIPKEQL WPHIQEFVDG
0301: ALVHIMQMSK VLGEQVGNGQ PVWPVVIHGH YADAGDSAAL LSGALNVPMV FTGHSLGRDK LEQLLKQGRQ TRDEIDATYK IMRRIEAEEL CLDASEIVIT
0401: STRQEIDKQW GLYNGFDVIM ERKLRARIKR GVSCYGREMP RMIPIPPGME FSHIVPHDVD LDSEEANEVG SDSPDPPVWA DIMRFFSNPR KPMILALARP
0501: DPKKNITTLV KAFGEHHELR NLANLTLIMG NRDVIDEMSS TNGAVLTSVL KLIDKYDLYG QVAYPKHHKQ SEVPDIYRLA ARTKGVFINC AYIEPFGLTL
0601: IEAAAYGLPM VATQNGGPVD IHRVLDNGIL VDPHNQNDIA EALYRLVSDK QLWAKCRQNG LDNIHRFSWP EHCKNYLSRV GTLKSRHPQW QKSDDATEVS
0701: ETDSPGDSLR DIHDISLNLK ISLDSEKSGS MSKYGRSSTS DRRNLEDAVQ KFSEAVSAGT KDESGEKAGA TTGSTKWPSL RRRKHIVVIA VDSVQDADLV
0801: QIIKNIFQAS SKEKSSGALG FVLSTSRAAS EIHPLLTSGG IEITDFDAFI CSSGSDLCYP SSNSEDMLSP AELPFMIDLD YHSQIQYRWG GEGLRKTLIR
0901: WAAEKNSESG QEAVVEDDEC SSTYCISFKV KNTEAVPPVK DLRKTMRIQA LRCHVLYSHD GSKLNFIPVL ASRSQALRYL YIRWGVELSN MTVVVGESGD
1001: TDYEGLLGGV QKTIILKGSF NSAPNQLHAA RSYSLEDVVS FDKPGIASVD GYAPDILKSA LQQFGALEG
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.