Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071807 | Potato | cytosol | 97.91 | 97.91 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 80.55 | 80.7 |
| KRH20178 | Soybean | nucleus | 78.27 | 77.9 |
| KRH03629 | Soybean | endoplasmic reticulum | 78.27 | 77.9 |
| CDX92473 | Canola | cytosol | 70.78 | 77.23 |
| CDY35815 | Canola | cytosol | 70.59 | 77.02 |
| AT5G20280.1 | Thale cress | cytosol | 74.95 | 75.74 |
| CDY45096 | Canola | cytosol | 69.83 | 75.72 |
| Bra002289.1-P | Field mustard | cytosol | 74.86 | 75.72 |
| Bra020096.1-P | Field mustard | cytosol | 72.3 | 73.98 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 72.3 | 71.95 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 72.11 | 71.63 |
| Solyc08g042000.2.1 | Tomato | nucleus | 69.64 | 70.24 |
| Os08t0301500-01 | Rice | plasma membrane | 69.17 | 68.39 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 68.41 | 67.45 |
| TraesCS3A01G015500.1 | Wheat | golgi | 68.41 | 67.32 |
| TraesCSU01G044500.2 | Wheat | unclear | 68.41 | 67.01 |
| OQU78428 | Sorghum | nucleus | 67.74 | 66.73 |
| Zm00001d050125_P002 | Maize | nucleus | 66.89 | 66.57 |
| HORVU3Hr1G002280.1 | Barley | plastid | 68.22 | 63.63 |
| Zm00001d015570_P002 | Maize | cytosol | 57.02 | 62.34 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 56.93 | 62.24 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 57.31 | 62.2 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 57.31 | 62.14 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 57.21 | 62.1 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 56.45 | 61.72 |
| KXG29640 | Sorghum | cytosol | 56.45 | 61.72 |
| Zm00001d036749_P001 | Maize | cytosol | 56.64 | 61.23 |
| KXG20466 | Sorghum | cytosol | 56.26 | 60.51 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 57.02 | 59.45 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 57.12 | 58.33 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 57.02 | 57.79 |
| Solyc09g092130.2.1 | Tomato | nucleus, unclear | 56.74 | 56.2 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 52.18 | 55.06 |
| Solyc11g045110.1.1 | Tomato | cytosol | 51.71 | 54.5 |
| Zm00001d046595_P002 | Maize | cytosol | 50.57 | 54.5 |
| Os06t0643800-01 | Rice | plasma membrane | 8.73 | 50.0 |
| Zm00001d016399_P002 | Maize | extracellular | 6.83 | 45.86 |
| Solyc07g042550.2.1 | Tomato | extracellular | 15.37 | 20.12 |
| Solyc12g009300.1.1 | Tomato | nucleus | 15.18 | 19.88 |
| Solyc09g098590.2.1 | Tomato | cytosol | 15.28 | 19.83 |
| Solyc02g081300.2.1 | Tomato | cytosol, nucleus | 15.75 | 18.78 |
| Solyc03g098290.2.1 | Tomato | cytosol, nucleus | 15.84 | 18.74 |
| Solyc07g042520.2.1 | Tomato | cytosol, extracellular | 14.23 | 18.68 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016157 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0046524 | GO:GO:0071836 | InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 |
| UniProt:K4CBP9 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | EnsemblPlantsGene:Solyc07g007790.2 | EnsemblPlants:Solyc07g007790.2.1 | InterPro:Sucrose_synth |
| InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI000276AFF8 | SEG:seg | : | : |
Description
Sucrose-phosphate synthase 1 [Source:Projected from Arabidopsis thaliana (AT5G20280) UniProtKB/Swiss-Prot;Acc:Q94BT0]
Coordinates
chr7:+:2438924..2447625
Molecular Weight (calculated)
118491.0 Da
IEP (calculated)
6.426
GRAVY (calculated)
-0.448
Length
1054 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNDWINSY LEAILDVGPG LDDKKSSLLL RERGRFSPTR YFVEEVITGF DETDLHRSWI RAQATRSPQE RNTRLENMCW RIWNLARQKK QLEGEQARWM
0101: AKRRQERERG RREAVADMSE DLSEGEKGDI VTDMSSHGES TRGRLPRISS VETMEAWVSQ QRGKKLYIVL ISLHGLIRGE NMELGRDSDT GGQVKYVVEL
0201: ARALGSMPGV YRVDLLTRQV SSPEVDWSYG EPTEMLTPIS TDGLMSEMGE SSGAYIIRIP FGPREKYIPK EQLWPYIPEF VDGALNHIIQ MSKVLGEQIG
0301: NGHPVWPVAI HGHYADAGDS AALLSGALNV PMLFTGHSLG RDKLEQLLRQ GRLSKDEINS TYKIMRRIEA EELTLDASEI VITSTRQEID EQWRLYDGFD
0401: PILERKLRAR IKRNVSCYGR FMPRMAVIPP GMEFHHIVPH EGDMDGDTEG SEDGKIPDPP IWAEIMRFFS NPRKPMILAL ARPDPKKNLT TLVKAFGECR
0501: PLRELANLTL IMGNRDNIDE MSSTNSALLL SILKMIDKYD LYGQVAYPKH HKQSDVPDIY RLAAKTKGVF INPAFIEPFG LTLIEAAAYG LPMVATKNGG
0601: PVDIHRVLDN GLLVDPHDQQ AIADALLKLV ADKQLWAKCR ANGLKNIHLF SWPEHCKTYL SRIASCKPRQ PRWLRPDDDD DENSETDSPS DSLRDIHDIS
0701: LNLRFSLDGE KNDNKENADS TLDPEVRKSK LENAVLSLSK GAPKSTSKSW SSDKADQNPG AGKFPAIRRR RHIFVIAVDC DASSGLSGSV KKIFEAVEKE
0801: RSEGSIGFIL ASSFNISEVQ SFLVSEGMSP TDFDAYICNS GGDLYYSSFH SEQNPFVVDL YYHSHIEYRW GGEGLRKTLV RWAASITDKN GENGEHIVVE
0901: DEDNSADYCY TFKVCKPGKV PPAKELRKVM RIQALRCHAV YCQNGSRINM IPVLASRSQA LRYLYLRWGM DLSKLVVFVG ESGDTDYEGL IGGLRKAVIM
1001: KGLCTNASSL IHGNRNYPLS DVLPFDSPNV IQADEECSST EIRSLLEKLA VLKG
0101: AKRRQERERG RREAVADMSE DLSEGEKGDI VTDMSSHGES TRGRLPRISS VETMEAWVSQ QRGKKLYIVL ISLHGLIRGE NMELGRDSDT GGQVKYVVEL
0201: ARALGSMPGV YRVDLLTRQV SSPEVDWSYG EPTEMLTPIS TDGLMSEMGE SSGAYIIRIP FGPREKYIPK EQLWPYIPEF VDGALNHIIQ MSKVLGEQIG
0301: NGHPVWPVAI HGHYADAGDS AALLSGALNV PMLFTGHSLG RDKLEQLLRQ GRLSKDEINS TYKIMRRIEA EELTLDASEI VITSTRQEID EQWRLYDGFD
0401: PILERKLRAR IKRNVSCYGR FMPRMAVIPP GMEFHHIVPH EGDMDGDTEG SEDGKIPDPP IWAEIMRFFS NPRKPMILAL ARPDPKKNLT TLVKAFGECR
0501: PLRELANLTL IMGNRDNIDE MSSTNSALLL SILKMIDKYD LYGQVAYPKH HKQSDVPDIY RLAAKTKGVF INPAFIEPFG LTLIEAAAYG LPMVATKNGG
0601: PVDIHRVLDN GLLVDPHDQQ AIADALLKLV ADKQLWAKCR ANGLKNIHLF SWPEHCKTYL SRIASCKPRQ PRWLRPDDDD DENSETDSPS DSLRDIHDIS
0701: LNLRFSLDGE KNDNKENADS TLDPEVRKSK LENAVLSLSK GAPKSTSKSW SSDKADQNPG AGKFPAIRRR RHIFVIAVDC DASSGLSGSV KKIFEAVEKE
0801: RSEGSIGFIL ASSFNISEVQ SFLVSEGMSP TDFDAYICNS GGDLYYSSFH SEQNPFVVDL YYHSHIEYRW GGEGLRKTLV RWAASITDKN GENGEHIVVE
0901: DEDNSADYCY TFKVCKPGKV PPAKELRKVM RIQALRCHAV YCQNGSRINM IPVLASRSQA LRYLYLRWGM DLSKLVVFVG ESGDTDYEGL IGGLRKAVIM
1001: KGLCTNASSL IHGNRNYPLS DVLPFDSPNV IQADEECSST EIRSLLEKLA VLKG
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.