Factsheet for Zm00001d016399_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013923_P001
Zm00001d040757_P002
Zm00001d040759_P002
Zm00001d043225_P001
Zm00001d047863_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G20280.1	Zm00001d040757_P002	AT1G02680.1	21798944
AT5G20280.1	Zm00001d040759_P002	AT1G02680.1	21798944
AT5G20280.1	Zm00001d043225_P001	AT1G61870.1	21798944
AT5G20280.1	Zm00001d013923_P001	AT4G21705.1	21798944
AT5G20280.1	Zm00001d047863_P004	AT5G09320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046595_P002	Maize	cytosol	78.34	12.58
Zm00001d036749_P001	Maize	cytosol	77.07	12.41
KXG20466	Sorghum	cytosol	77.07	12.35
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	40.13	12.07
TraesCS7B01G434300.1	Wheat	cytosol	66.88	10.81
TraesCS7D01G508100.1	Wheat	cytosol	66.24	10.71
TraesCS7A01G518200.1	Wheat	cytosol	66.24	10.7
HORVU7Hr1G115590.10	Barley	nucleus	65.61	10.31
Zm00001d015570_P002	Maize	cytosol	59.24	9.65
GSMUA_Achr4P06050_001	Banana	cytosol	52.23	7.74
GSMUA_Achr9P22510_001	Banana	cytosol	50.96	7.54
Zm00001d050125_P002	Maize	nucleus	48.41	7.18
CDX70382	Canola	cytosol	43.31	7.07
CDX92473	Canola	cytosol	43.31	7.04
CDY35815	Canola	cytosol	43.31	7.04
CDX80498	Canola	cytosol	43.31	7.03
KRH20178	Soybean	nucleus	47.13	6.99
PGSC0003DMT400071807	Potato	cytosol	46.5	6.93
CDX88168	Canola	nucleus	42.04	6.88
Solyc07g007790.2.1	Tomato	cytosol	45.86	6.83
KRH03629	Soybean	endoplasmic reticulum	45.86	6.8
VIT_11s0118g00200.t01	Wine grape	cytosol	45.22	6.75
Bra002289.1-P	Field mustard	cytosol	44.59	6.72
AT5G11110.1	Thale cress	cytosol	44.59	6.69
VIT_04s0008g05730.t01	Wine grape	cytosol	44.59	6.62
Bra009830.1-P	Field mustard	nucleus	43.95	6.59
CDY45096	Canola	cytosol	40.76	6.58
CDX78411	Canola	cytosol	43.31	6.54
Bra006090.1-P	Field mustard	cytosol	43.31	6.54
Bra020096.1-P	Field mustard	cytosol	42.68	6.5
AT5G20280.1	Thale cress	cytosol	42.68	6.42
Solyc08g042000.2.1	Tomato	nucleus	42.04	6.32
Zm00001d012036_P001	Maize	nucleus	35.67	5.24
Zm00001d042353_P003	Maize	nucleus	35.03	5.1
Zm00001d048979_P001	Maize	cytosol	30.57	4.7
Os06t0643800-01	Rice	plasma membrane	4.46	3.8
Zm00001d029091_P003	Maize	cytosol	14.65	2.79
Zm00001d047253_P003	Maize	cytosol	14.01	2.7
Zm00001d029087_P002	Maize	cytosol	14.01	2.59
Zm00001d045042_P014	Maize	cytosol, mitochondrion	13.38	2.55
Zm00001d051837_P002	Maize	cytosol	12.74	2.35
Zm00001d010801_P001	Maize	cytosol	1.91	1.22
Zm00001d014119_P001	Maize	cytosol	0.64	0.65
Zm00001d050151_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d016399_P002	EnsemblPlants:Zm00001d016399_T002	EnsemblPlantsGene:Zm00001d016399	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF347
ProteinID:AQK70627.1	SignalP:SignalP-noTM	SUPFAM:SSF53756	UniParc:UPI000842C6BD	UniProt:A0A1D6H765	MapMan:35.1

Description

Sucrose-phosphate synthase 1

Coordinates

chr5:+:160963829..160964698

Molecular Weight (calculated)

18296.0 Da

IEP (calculated)

8.496

GRAVY (calculated)

-0.329

Length

157 amino acids

Sequence
(BLAST)

001: MNMIYMKFLI SIGFMVYVLE NGLHVDPHDQ HAIADALYKM LSEKQFWSRC REDGLKNIHQ FSWSEHCKNY LSRISTLGPR HPSFVCKEDH KVPVKCRKHI
101: SVIAVDSVNK EDLIQIIRNS IEATRTGTVR FYRFCAVDFI DNSRATDSNS LHRHALD

Best Arabidopsis Sequence Match ( AT5G20280.1 )
(BLAST)

0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD

Arabidopsis Description

SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.