Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036749_P001 | Maize | cytosol | 95.92 | 96.41 |
| Os06t0643800-01 | Rice | plasma membrane | 16.43 | 87.5 |
| Zm00001d046595_P002 | Maize | cytosol | 87.04 | 87.22 |
| KXG29640 | Sorghum | cytosol | 83.06 | 84.44 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 83.67 | 84.36 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 83.57 | 84.35 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 83.57 | 84.35 |
| Zm00001d016399_P002 | Maize | extracellular | 12.35 | 77.07 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 76.22 | 74.77 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 66.53 | 61.57 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 66.02 | 60.98 |
| CDX92473 | Canola | cytosol | 59.69 | 60.56 |
| CDY35815 | Canola | cytosol | 59.59 | 60.46 |
| CDX80498 | Canola | cytosol | 59.59 | 60.39 |
| CDX88168 | Canola | nucleus | 58.98 | 60.21 |
| CDX70382 | Canola | cytosol | 59.08 | 60.19 |
| CDY45096 | Canola | cytosol | 58.98 | 59.47 |
| OQU78428 | Sorghum | nucleus | 63.37 | 58.04 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 62.04 | 57.79 |
| KRH20178 | Soybean | nucleus | 61.84 | 57.22 |
| KRH03629 | Soybean | endoplasmic reticulum | 61.53 | 56.94 |
| PGSC0003DMT400071807 | Potato | cytosol | 60.71 | 56.45 |
| Bra002289.1-P | Field mustard | cytosol | 60.0 | 56.43 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 60.92 | 56.43 |
| Solyc07g007790.2.1 | Tomato | cytosol | 60.51 | 56.26 |
| AT5G20280.1 | Thale cress | cytosol | 59.8 | 56.18 |
| Bra020096.1-P | Field mustard | cytosol | 58.67 | 55.83 |
| Bra009830.1-P | Field mustard | nucleus | 59.39 | 55.59 |
| CDX78411 | Canola | cytosol | 58.67 | 55.34 |
| Bra006090.1-P | Field mustard | cytosol | 58.57 | 55.25 |
| AT5G11110.1 | Thale cress | cytosol | 58.98 | 55.21 |
| Solyc08g042000.2.1 | Tomato | nucleus | 58.06 | 54.45 |
| EES04111 | Sorghum | nucleus | 50.31 | 45.61 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 22.96 | 43.1 |
| KXG28137 | Sorghum | cytosol | 46.12 | 42.24 |
| KXG19528 | Sorghum | mitochondrion | 16.22 | 19.83 |
| EER92301 | Sorghum | cytosol | 16.22 | 19.65 |
| OQU92441 | Sorghum | cytosol | 15.51 | 18.63 |
| KXG31429 | Sorghum | cytosol | 15.71 | 17.84 |
| OQU77175 | Sorghum | plastid | 15.82 | 17.28 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | UniProt:A0A194YLJ2 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 |
| InterPro:HAD_sf | InterPro:IPR023214 | EnsemblPlants:KXG20466 | ProteinID:KXG20466 | ProteinID:KXG20466.1 | PFAM:PF00534 |
| PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF347 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 |
| EnsemblPlantsGene:SORBI_3010G205100 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln |
| TIGRFAMs:TIGR02468 | UniParc:UPI0003C70687 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:54739990..54750024
Molecular Weight (calculated)
109584.0 Da
IEP (calculated)
7.824
GRAVY (calculated)
-0.299
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGNDNWINS YLDAILDAGK GAAAAGAGAA AAARGRGGGG GGDRPSLLLR ERGHFSPARY FVEEVITGYD ETDLYKTWLR ANAMRSPQEK NTRLENMTWR
101: IWNLARKKKE FEKEEANRLS KRRLETEKPR NDATAEMSED LFEGVKGEDA GDPSVAYGDS TTGNTPRISS FDKLYIVLIS LHGLIRGENM ELGRDSDTGG
201: QVKYVVELAK ALSSCPGVYR VDLLTRQILA PNFDRGYGEP DEMLASTSFK NFKCERGENS GAHIIRIPFG PKDKHLAKEN IWPFIQEFVD GALAHIVRMS
301: KTIGKETGSV CPVWPAVIHG HYSSAGVAAA LLSGALNVPM VFTGHFLGKD KLEGLLKQGR QTREQINVTY KIMRRIEAEE LSLDASEIVI ASTRQEIEEQ
401: WNLYDGFEVM LARKLRALVK RGAHCYGRYM PRMVIIPPGV EFGQLIHDFD IYGDEDNPSP ASEDPSIWFE IMRFFTNPRK PMILAIARPY AEKNIATLVK
501: AFGECHPLRE LANLTLIMGN REAISKMNKV SAAVLTSVLT LIDEYDLYGQ VAYPKHHKHS EVPDIYRLAA RTKGAFVNVA YFEQFGVTLI EAAMHGLPVI
601: ATKHGAPVEI HQVLENGLLV DPHDQHAIAD ALYKMLSEKQ FWSRCRDNGL KNIHQFSWPE HCKNYLSRIL TLGPRHPAFA CKEDQKVPVK CRKHIFVIAV
701: DSVNKEDLIQ IIRNSVEATR TGTMSGSTGF VLSTSLTIAE LQSVIVRTGM LPTDFDAFIC NSGSDIYYPS QSSDVPSNSR VTFALDHNYR SHIEYRWGGE
801: GLRKYLVKWA SSVVERRGRT EKQIIFEDSE HSSTYCLAFR VVNPNHLPPL KELQKLMRIQ SLRCHALYNH GATRLSVIPI HASRSQALRY LSIRWGIELP
901: DAVVIVGETG DSDYEELFGG LHKTVILKGG FNTPANRIHT VRRYPLQDVV ALDSSNIIGI EGFSTGDIRS AMQQLGIPTQ
101: IWNLARKKKE FEKEEANRLS KRRLETEKPR NDATAEMSED LFEGVKGEDA GDPSVAYGDS TTGNTPRISS FDKLYIVLIS LHGLIRGENM ELGRDSDTGG
201: QVKYVVELAK ALSSCPGVYR VDLLTRQILA PNFDRGYGEP DEMLASTSFK NFKCERGENS GAHIIRIPFG PKDKHLAKEN IWPFIQEFVD GALAHIVRMS
301: KTIGKETGSV CPVWPAVIHG HYSSAGVAAA LLSGALNVPM VFTGHFLGKD KLEGLLKQGR QTREQINVTY KIMRRIEAEE LSLDASEIVI ASTRQEIEEQ
401: WNLYDGFEVM LARKLRALVK RGAHCYGRYM PRMVIIPPGV EFGQLIHDFD IYGDEDNPSP ASEDPSIWFE IMRFFTNPRK PMILAIARPY AEKNIATLVK
501: AFGECHPLRE LANLTLIMGN REAISKMNKV SAAVLTSVLT LIDEYDLYGQ VAYPKHHKHS EVPDIYRLAA RTKGAFVNVA YFEQFGVTLI EAAMHGLPVI
601: ATKHGAPVEI HQVLENGLLV DPHDQHAIAD ALYKMLSEKQ FWSRCRDNGL KNIHQFSWPE HCKNYLSRIL TLGPRHPAFA CKEDQKVPVK CRKHIFVIAV
701: DSVNKEDLIQ IIRNSVEATR TGTMSGSTGF VLSTSLTIAE LQSVIVRTGM LPTDFDAFIC NSGSDIYYPS QSSDVPSNSR VTFALDHNYR SHIEYRWGGE
801: GLRKYLVKWA SSVVERRGRT EKQIIFEDSE HSSTYCLAFR VVNPNHLPPL KELQKLMRIQ SLRCHALYNH GATRLSVIPI HASRSQALRY LSIRWGIELP
901: DAVVIVGETG DSDYEELFGG LHKTVILKGG FNTPANRIHT VRRYPLQDVV ALDSSNIIGI EGFSTGDIRS AMQQLGIPTQ
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.