Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92473 | Canola | cytosol | 88.02 | 95.03 |
| Bra002289.1-P | Field mustard | cytosol | 94.82 | 94.91 |
| CDY35815 | Canola | cytosol | 87.82 | 94.82 |
| CDY45096 | Canola | cytosol | 86.0 | 92.28 |
| Bra020096.1-P | Field mustard | cytosol | 90.51 | 91.65 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 77.85 | 77.19 |
| KRH20178 | Soybean | nucleus | 77.56 | 76.39 |
| KRH03629 | Soybean | endoplasmic reticulum | 77.37 | 76.2 |
| PGSC0003DMT400071807 | Potato | cytosol | 75.93 | 75.14 |
| Solyc07g007790.2.1 | Tomato | cytosol | 75.74 | 74.95 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 70.95 | 69.88 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 69.99 | 68.8 |
| AT5G11110.1 | Thale cress | cytosol | 68.94 | 68.67 |
| Os08t0301500-01 | Rice | plasma membrane | 68.65 | 67.17 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 67.11 | 65.48 |
| OQU78428 | Sorghum | nucleus | 67.02 | 65.33 |
| TraesCSU01G044500.2 | Wheat | unclear | 67.21 | 65.15 |
| TraesCS3A01G015500.1 | Wheat | golgi | 66.83 | 65.08 |
| Zm00001d050125_P002 | Maize | nucleus | 65.87 | 64.87 |
| HORVU3Hr1G002280.1 | Barley | plastid | 67.11 | 61.95 |
| Zm00001d015570_P002 | Maize | cytosol | 56.66 | 61.31 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 57.05 | 61.28 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 57.05 | 61.21 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 56.95 | 61.17 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 55.99 | 60.58 |
| KXG29640 | Sorghum | cytosol | 55.99 | 60.58 |
| Zm00001d036749_P001 | Maize | cytosol | 56.18 | 60.1 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 55.42 | 59.96 |
| KXG20466 | Sorghum | cytosol | 56.18 | 59.8 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 56.28 | 58.06 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 56.28 | 56.88 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 56.09 | 56.25 |
| AT1G04920.1 | Thale cress | cytosol | 56.86 | 55.84 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 52.35 | 54.65 |
| AT4G10120.3 | Thale cress | cytosol | 54.46 | 54.1 |
| Zm00001d046595_P002 | Maize | cytosol | 50.53 | 53.89 |
| Os06t0643800-01 | Rice | plasma membrane | 8.34 | 47.28 |
| Zm00001d016399_P002 | Maize | extracellular | 6.42 | 42.68 |
| AT5G49190.1 | Thale cress | cytosol | 16.11 | 20.82 |
| AT4G02280.1 | Thale cress | mitochondrion | 15.63 | 20.15 |
| AT5G20830.1 | Thale cress | cytosol | 15.34 | 19.8 |
| AT3G43190.1 | Thale cress | cytosol | 15.24 | 19.68 |
| AT5G37180.1 | Thale cress | cytosol | 14.67 | 18.28 |
| AT1G73370.1 | Thale cress | cytosol | 15.24 | 16.88 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | EntrezGene:832150 | UniProt:A0A178UK32 | ProteinID:AED92824.1 |
| EMBL:AF296825 | EMBL:AK230113 | ArrayExpress:AT5G20280 | EnsemblPlantsGene:AT5G20280 | RefSeq:AT5G20280 | TAIR:AT5G20280 |
| RefSeq:AT5G20280-TAIR-G | EnsemblPlants:AT5G20280.1 | TAIR:AT5G20280.1 | Symbol:ATSPS1F | EMBL:AY039911 | EMBL:AY079334 |
| Unigene:At.22681 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0005985 |
| GO:GO:0005986 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 |
| GO:GO:0071836 | InterPro:Glyco_trans_1 | EMBL:KJ138676 | RefSeq:NP_197528.1 | ProteinID:OAO94109.1 | PFAM:PF00534 |
| PFAM:PF00862 | PFAM:PF05116 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 | UniProt:Q94BT0 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| UniParc:UPI0000048B7B | UniProt:W8PUZ7 | SEG:seg | : | : | : |
Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
Coordinates
chr5:-:6844712..6850237
Molecular Weight (calculated)
117328.0 Da
IEP (calculated)
6.382
GRAVY (calculated)
-0.471
Length
1043 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.