Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G013000.1 | Wheat | nucleus | 91.06 | 96.26 |
| TraesCSU01G044500.2 | Wheat | unclear | 91.59 | 96.19 |
| TraesCS3A01G015500.1 | Wheat | golgi | 90.8 | 95.8 |
| Os08t0301500-01 | Rice | plasma membrane | 82.57 | 87.52 |
| Zm00001d050125_P002 | Maize | nucleus | 79.65 | 84.99 |
| OQU78428 | Sorghum | nucleus | 79.91 | 84.39 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 68.41 | 72.99 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 68.32 | 72.76 |
| CDX92473 | Canola | cytosol | 59.2 | 69.25 |
| CDY35815 | Canola | cytosol | 59.12 | 69.15 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 64.25 | 69.01 |
| PGSC0003DMT400071807 | Potato | cytosol | 63.81 | 68.41 |
| Solyc07g007790.2.1 | Tomato | cytosol | 63.63 | 68.22 |
| KRH20178 | Soybean | nucleus | 63.19 | 67.42 |
| KRH03629 | Soybean | endoplasmic reticulum | 63.19 | 67.42 |
| Bra002289.1-P | Field mustard | cytosol | 62.12 | 67.37 |
| CDY45096 | Canola | cytosol | 57.79 | 67.18 |
| AT5G20280.1 | Thale cress | cytosol | 61.95 | 67.11 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 62.83 | 67.11 |
| CDX88168 | Canola | nucleus | 56.81 | 66.88 |
| CDX80498 | Canola | cytosol | 56.99 | 66.6 |
| CDX70382 | Canola | cytosol | 56.64 | 66.53 |
| Bra020096.1-P | Field mustard | cytosol | 59.82 | 65.63 |
| Bra009830.1-P | Field mustard | nucleus | 60.27 | 65.04 |
| CDX78411 | Canola | cytosol | 59.47 | 64.68 |
| Bra006090.1-P | Field mustard | cytosol | 59.38 | 64.58 |
| AT5G11110.1 | Thale cress | cytosol | 59.82 | 64.57 |
| Solyc08g042000.2.1 | Tomato | nucleus | 58.67 | 63.45 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 56.19 | 61.53 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 49.65 | 56.16 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 24.16 | 52.3 |
| HORVU3Hr1G093830.2 | Barley | cytosol, nucleus | 45.04 | 51.26 |
| HORVU4Hr1G015570.3 | Barley | cytosol | 46.11 | 49.34 |
| HORVU4Hr1G049500.3 | Barley | cytosol | 14.96 | 20.86 |
| HORVU7Hr1G033230.2 | Barley | mitochondrion | 14.69 | 20.52 |
| HORVU7Hr1G007220.8 | Barley | cytosol | 14.42 | 20.0 |
| HORVU2Hr1G030870.1 | Barley | plasma membrane | 14.16 | 19.61 |
| HORVU6Hr1G094880.6 | Barley | cytosol | 14.07 | 18.47 |
| HORVU7Hr1G120520.1 | Barley | cytosol | 13.98 | 18.31 |
| HORVU0Hr1G019020.1 | Barley | cytosol | 2.39 | 18.12 |
| HORVU5Hr1G050660.1 | Barley | cytosol | 0.53 | 15.0 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | UniProt:A0A287JX12 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 |
| InterPro:Glyco_trans_1 | InterPro:HAD_sf | EnsemblPlantsGene:HORVU3Hr1G002280 | EnsemblPlants:HORVU3Hr1G002280.1 | InterPro:IPR023214 | PFAM:PF00534 |
| PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 | InterPro:SPP_N | InterPro:SPS_C |
| SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI000B4864F1 | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:4992532..5000834
Molecular Weight (calculated)
125218.0 Da
IEP (calculated)
6.375
GRAVY (calculated)
-0.480
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: CFASGRLKPR SRSRSSLPIA TTATDPSPIP SPTSQSPPHP TPPRSSPGEV GSAAMVGNDW INSYLEAILD AGGAAGDFSS AAGGGDGQGA ASSSSAAEKK
0101: RDKASLMLRE RGRFNPARYF VEEVISGFDE TDLYKTWVRT SAMRSPQERN TRLENMSWRI WNLARKKKQI EGEEASRSSK KRLEREKARR DAAADLSEDL
0201: SDGEKGENIN ESSIHAESTR GRMPRIGSTD AIDVWANQHK DKKLYIVLIS IHGLIRGENM ELGRDSDTGG QVKYVVELAR ALGETPGVYR VDLLTRQISA
0301: PDVDWSYGEP TEMLSPRNSE NLGDDMGESS GAYIVRIPFG PREKYIPKEQ LWPHIQEFVD GALVHIMQMS KVLGEQVGNG QPVWPVVIHG HYADAGDSAA
0401: LLSGALNVPM VFTGHSLGRD KLEQLLKQGR QTRDEVNATY KIMRRIEAEE LCLDASEIVI TSTRQEIDKQ WGLYNGFDVI MERKLRARIK RGVSCYGREM
0501: PRMIPIPPGM EFSHIVPHDV DLDSEEANEV SSDSPDPPVW ADIMRFFSNP RKPMILALAR PDPKKNITTL VKAFGEHHEL RNLANLTLIM GNRDVIDEMS
0601: STNGAVLTSV LKLIDKYDLY GQVAYPKHHK QSEVPDIYRL AARTKGVFIN CAYIEPFGLT LIEAAAYGLP MVATQNGGPV DIHRVLDNGI LVDPHNQNDI
0701: AEALYRLVSD KQLWAQCRKN GLENIHRFSW PEHCKNYLSR VGTLKSRHPR WQRSDDATEV SETDSPGDSL RDIHDISLNL KISLDSEKSG NMSKYGRSST
0801: NERRNIEDAV LKFSEAVSAG TKDESGENAE ATTGSNKWPS LRRRKHIVVI AVDSVQDADL VQIIKNIFQA SSKEKSSGAL GFVLSTSRAV SEIHPLLTSG
0901: GIEIADFDAF ICSSGSDLCY PSSNSEDMLS PAELPFMIDL DYHSQIQYRW GGEGLRKTLI RWAAEKNSER GQEAVTEDDE CSSTYCISFK VKNTEAVPPV
1001: KDLRKTMRIQ ALRCHVLYSH DGSKLNFIPV LASRSQALRY LYIRWGVELS KMTVVVGESG DTDYEGLLGG MQKTIILKGS FNSVPNQLHA ARSYSLEDVV
1101: SFDKPGIASV EGYSPDNLKS ALQQFGALEG
0101: RDKASLMLRE RGRFNPARYF VEEVISGFDE TDLYKTWVRT SAMRSPQERN TRLENMSWRI WNLARKKKQI EGEEASRSSK KRLEREKARR DAAADLSEDL
0201: SDGEKGENIN ESSIHAESTR GRMPRIGSTD AIDVWANQHK DKKLYIVLIS IHGLIRGENM ELGRDSDTGG QVKYVVELAR ALGETPGVYR VDLLTRQISA
0301: PDVDWSYGEP TEMLSPRNSE NLGDDMGESS GAYIVRIPFG PREKYIPKEQ LWPHIQEFVD GALVHIMQMS KVLGEQVGNG QPVWPVVIHG HYADAGDSAA
0401: LLSGALNVPM VFTGHSLGRD KLEQLLKQGR QTRDEVNATY KIMRRIEAEE LCLDASEIVI TSTRQEIDKQ WGLYNGFDVI MERKLRARIK RGVSCYGREM
0501: PRMIPIPPGM EFSHIVPHDV DLDSEEANEV SSDSPDPPVW ADIMRFFSNP RKPMILALAR PDPKKNITTL VKAFGEHHEL RNLANLTLIM GNRDVIDEMS
0601: STNGAVLTSV LKLIDKYDLY GQVAYPKHHK QSEVPDIYRL AARTKGVFIN CAYIEPFGLT LIEAAAYGLP MVATQNGGPV DIHRVLDNGI LVDPHNQNDI
0701: AEALYRLVSD KQLWAQCRKN GLENIHRFSW PEHCKNYLSR VGTLKSRHPR WQRSDDATEV SETDSPGDSL RDIHDISLNL KISLDSEKSG NMSKYGRSST
0801: NERRNIEDAV LKFSEAVSAG TKDESGENAE ATTGSNKWPS LRRRKHIVVI AVDSVQDADL VQIIKNIFQA SSKEKSSGAL GFVLSTSRAV SEIHPLLTSG
0901: GIEIADFDAF ICSSGSDLCY PSSNSEDMLS PAELPFMIDL DYHSQIQYRW GGEGLRKTLI RWAAEKNSER GQEAVTEDDE CSSTYCISFK VKNTEAVPPV
1001: KDLRKTMRIQ ALRCHVLYSH DGSKLNFIPV LASRSQALRY LYIRWGVELS KMTVVVGESG DTDYEGLLGG MQKTIILKGS FNSVPNQLHA ARSYSLEDVV
1101: SFDKPGIASV EGYSPDNLKS ALQQFGALEG
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.