Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0338100-00 | |
| Os01t0793200-01 | |
| Os03t0262900-02 | |
| Os07t0598500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G20280.1 | Os01t0338100-00 | AT1G02680.1 | 21798944 |
| AT5G20280.1 | Os01t0793200-01 | AT1G61870.1 | 21798944 |
| AT5G20280.1 | Os07t0598500-01 | AT4G21705.1 | 21798944 |
| AT5G20280.1 | Os03t0262900-02 | AT5G09320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78428 | Sorghum | nucleus | 89.21 | 88.88 |
| Zm00001d050125_P002 | Maize | nucleus | 87.52 | 88.1 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 87.71 | 87.46 |
| TraesCSU01G044500.2 | Wheat | unclear | 87.99 | 87.17 |
| TraesCS3A01G015500.1 | Wheat | golgi | 87.52 | 87.11 |
| HORVU3Hr1G002280.1 | Barley | plastid | 87.52 | 82.57 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 74.86 | 75.35 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 74.95 | 75.31 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 70.26 | 71.2 |
| CDX92473 | Canola | cytosol | 63.7 | 70.29 |
| CDY35815 | Canola | cytosol | 63.6 | 70.19 |
| PGSC0003DMT400071807 | Potato | cytosol | 68.95 | 69.73 |
| Solyc07g007790.2.1 | Tomato | cytosol | 68.39 | 69.17 |
| KRH20178 | Soybean | nucleus | 68.39 | 68.84 |
| KRH03629 | Soybean | endoplasmic reticulum | 68.29 | 68.74 |
| CDY45096 | Canola | cytosol | 62.66 | 68.72 |
| AT5G20280.1 | Thale cress | cytosol | 67.17 | 68.65 |
| CDX88168 | Canola | nucleus | 61.73 | 68.54 |
| CDX80498 | Canola | cytosol | 62.1 | 68.46 |
| CDX70382 | Canola | cytosol | 61.73 | 68.4 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 67.54 | 68.05 |
| Bra002289.1-P | Field mustard | cytosol | 66.51 | 68.04 |
| CDX78411 | Canola | cytosol | 65.2 | 66.89 |
| Bra006090.1-P | Field mustard | cytosol | 65.1 | 66.8 |
| Bra009830.1-P | Field mustard | nucleus | 65.48 | 66.67 |
| AT5G11110.1 | Thale cress | cytosol | 65.38 | 66.57 |
| Bra020096.1-P | Field mustard | cytosol | 64.26 | 66.5 |
| Solyc08g042000.2.1 | Tomato | nucleus | 63.88 | 65.17 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 59.85 | 63.11 |
| Os06t0643800-01 | Rice | plasma membrane | 9.47 | 54.89 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 26.74 | 54.6 |
| Os01t0919400-01 | Rice | plasma membrane | 52.81 | 51.94 |
| Os11t0236100-01 | Rice | cytosol, plasma membrane | 18.48 | 38.7 |
| Os06t0194900-03 | Rice | extracellular | 16.79 | 22.15 |
| Os03t0340500-01 | Rice | cytosol, plasma membrane, plastid | 16.32 | 21.51 |
| Os07t0616800-01 | Rice | cytosol | 15.76 | 20.59 |
| Os03t0401300-01 | Rice | extracellular | 15.57 | 20.34 |
| Os04t0249500-00 | Rice | cytosol | 15.2 | 19.19 |
| Os02t0831500-01 | Rice | plastid | 15.2 | 19.15 |
| Os04t0309600-01 | Rice | cytosol, plasma membrane | 15.1 | 19.08 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | EntrezGene:4345220 | ProteinID:AAQ56529.1 | EMBL:AK101676 |
| ProteinID:BAC92378.1 | ProteinID:BAF23409.1 | ProteinID:BAT04814.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0005985 | GO:GO:0005986 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 |
| EnsemblPlantsGene:Os08g0301500 | EnsemblPlants:Os08t0301500-01 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF334 | UniProt:Q6ZHZ1 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth |
| InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI00001D1B2D | RefSeq:XP_015650062.1 | RefSeq:XP_015650063.1 | SEG:seg |
Description
SUCROSE PHOSPHATE SYNTHASE 8Similar to Sucrose-phosphate synthase 2 (EC 2.4.1.14) (Fragment). (Os08t0301500-01)
Coordinates
chr8:+:12411938..12424753
Molecular Weight (calculated)
118732.0 Da
IEP (calculated)
6.349
GRAVY (calculated)
-0.409
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNDWINSY LEAILDAGGA AGEISAAAGG GGDGAAATGE KRDKSSLMLR ERGRFSPARY FVEEVISGFD ETDLYKTWVR TAAMRSPQER NTRLENMSWR
0101: IWNLARKKKQ IEGEEASRLA KQRLEREKAR RYAAADMSED LSEGEKGENI NESSSTHDES TRGRMPRIGS TDAIEAWASQ HKDKKLYIVL ISIHGLIRGE
0201: NMELGRDSDT GGQVKYVVEL ARALGSTPGV YRVDLLTRQI SAPDVDWSYG EPTEMLSPRN SENFGHDMGE SSGAYIVRIP FGPRDKYIPK EHLWPHIQEF
0301: VDGALVHIMQ MSKVLGEQVG SGQLVWPVVI HGHYADAGDS AALLSGALNV PMIFTGHSLG RDKLEQLLKQ GRQTRDEINT IYKIMRRIEA EELCLDASEI
0401: IITSTRQEIE QQWGLYDGFD LTMARKLRAR IKRGVSCYGR YMPRMIAVPP GMEFSHIVPH DVDQDGEEAN EDGSGSTDPP IWADIMRFFS NPRKPMILAL
0501: ARPDPKKNIT TLVKAFGEHR ELRNLANLTL IMGNRDVIDE MSSTNSAVLT SILKLIDKYD LYGQVAYPKH HKQSEVPDIY RLAARTKGVF INCAFIEPFG
0601: LTLIEAAAYG LPMVATRNGG PVDIHRVLDN GILVDPHNQN EIAEALYKLV SDKQLWAQCR QNGLKNIHQF SWPEHCKNYL SRVGTLKPRH PRWQKSDDAT
0701: EVSEADSPGD SLRDVHDISL NLKLSLDSEK SSTKENSVRR NLEDAVQKLS RGVSANRKTE SVENMEATTG NKWPSLRRRK HIVVIAIDSV QDANLVEIIK
0801: NIFVASSNER LSGSVGFVLS TSRAISEVHS LLTSGGIEAT DFDAFICNSG SDLCYPSSNS EDMLSPAELP FMIDLDYHTQ IEYRWGGEGL RKTLICWAAE
0901: KSEGGQVVLV EDEECSSTYC ISFRVKNAEA VPPVKELRKT MRIQALRCHV LYSHDGSKLN VIPVLASRSQ ALRYLYIRWG VELSNMTVVV GESGDTDYEG
1001: LLGGVHKTII LKGSFNAVPN QVHAARSYSL QDVISFDKPG ITSIEGYGPD NLKSALQQFG ILKDNV
0101: IWNLARKKKQ IEGEEASRLA KQRLEREKAR RYAAADMSED LSEGEKGENI NESSSTHDES TRGRMPRIGS TDAIEAWASQ HKDKKLYIVL ISIHGLIRGE
0201: NMELGRDSDT GGQVKYVVEL ARALGSTPGV YRVDLLTRQI SAPDVDWSYG EPTEMLSPRN SENFGHDMGE SSGAYIVRIP FGPRDKYIPK EHLWPHIQEF
0301: VDGALVHIMQ MSKVLGEQVG SGQLVWPVVI HGHYADAGDS AALLSGALNV PMIFTGHSLG RDKLEQLLKQ GRQTRDEINT IYKIMRRIEA EELCLDASEI
0401: IITSTRQEIE QQWGLYDGFD LTMARKLRAR IKRGVSCYGR YMPRMIAVPP GMEFSHIVPH DVDQDGEEAN EDGSGSTDPP IWADIMRFFS NPRKPMILAL
0501: ARPDPKKNIT TLVKAFGEHR ELRNLANLTL IMGNRDVIDE MSSTNSAVLT SILKLIDKYD LYGQVAYPKH HKQSEVPDIY RLAARTKGVF INCAFIEPFG
0601: LTLIEAAAYG LPMVATRNGG PVDIHRVLDN GILVDPHNQN EIAEALYKLV SDKQLWAQCR QNGLKNIHQF SWPEHCKNYL SRVGTLKPRH PRWQKSDDAT
0701: EVSEADSPGD SLRDVHDISL NLKLSLDSEK SSTKENSVRR NLEDAVQKLS RGVSANRKTE SVENMEATTG NKWPSLRRRK HIVVIAIDSV QDANLVEIIK
0801: NIFVASSNER LSGSVGFVLS TSRAISEVHS LLTSGGIEAT DFDAFICNSG SDLCYPSSNS EDMLSPAELP FMIDLDYHTQ IEYRWGGEGL RKTLICWAAE
0901: KSEGGQVVLV EDEECSSTYC ISFRVKNAEA VPPVKELRKT MRIQALRCHV LYSHDGSKLN VIPVLASRSQ ALRYLYIRWG VELSNMTVVV GESGDTDYEG
1001: LLGGVHKTII LKGSFNAVPN QVHAARSYSL QDVISFDKPG ITSIEGYGPD NLKSALQQFG ILKDNV
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.