Factsheet for Os02t0831500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G492600.1	Wheat	cytosol	57.8	87.32
HORVU6Hr1G094880.6	Barley	cytosol	82.98	81.53
TraesCS6D01G403800.1	Wheat	cytosol	83.22	81.2
TraesCSU01G082000.1	Wheat	plastid	83.1	80.99
TraesCS6B01G466600.1	Wheat	cytosol	82.74	80.65
Os04t0249500-00	Rice	cytosol	78.37	78.55
Os04t0309600-01	Rice	cytosol, plasma membrane	78.13	78.32
KXG31429	Sorghum	cytosol	77.19	75.67
PGSC0003DMT400079728	Potato	cytosol	15.72	75.57
Zm00001d051837_P002	Maize	cytosol	76.0	75.56
GSMUA_Achr9P21240_001	Banana	cytosol	72.69	72.87
GSMUA_Achr3P13980_001	Banana	cytosol	72.1	72.27
PGSC0003DMT400043117	Potato	cytosol	66.78	67.26
KRH17270	Soybean	cytosol	66.43	66.9
KRH72916	Soybean	cytosol	66.43	66.9
VIT_04s0079g00230.t01	Wine grape	cytosol	66.67	66.59
Solyc02g081300.2.1	Tomato	cytosol, nucleus	67.49	64.59
VIT_17s0053g00700.t01	Wine grape	cytosol	69.15	64.57
KRH30890	Soybean	cytosol	63.95	64.02
AT5G37180.1	Thale cress	cytosol	61.82	62.49
Bra039502.1-P	Field mustard	cytosol	61.82	62.49
CDY71780	Canola	cytosol, extracellular	26.24	62.36
Solyc03g098290.2.1	Tomato	cytosol, nucleus	65.6	62.29
CDY38565	Canola	cytosol	61.82	61.82
CDY26996	Canola	cytosol	61.47	61.47
KRH38924	Soybean	plastid	66.43	61.02
KRH09470	Soybean	cytosol, plastid	66.31	60.98
CDX96472	Canola	cytosol	63.83	57.75
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	55.08	57.6
CDX72985	Canola	cytosol	63.59	57.6
Bra015995.1-P	Field mustard	cytosol	64.18	57.58
Bra003845.1-P	Field mustard	cytosol	63.95	57.55
CDX68228	Canola	cytosol	63.59	57.23
AT1G73370.1	Thale cress	cytosol	63.71	57.22
CDY11107	Canola	cytosol	63.48	57.13
Os06t0194900-03	Rice	extracellular	52.25	54.7
Os03t0401300-01	Rice	extracellular	51.18	53.06
Os07t0616800-01	Rice	cytosol	51.06	52.94
Os01t0919400-01	Rice	plasma membrane	19.74	15.41
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	18.32	15.33
Os08t0301500-01	Rice	plasma membrane	19.15	15.2
Os11t0236100-01	Rice	cytosol, plasma membrane	6.15	10.22
Os06t0643800-01	Rice	plasma membrane	0.47	2.17

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EMBL:AK065549
ProteinID:BAD23005.1	ProteinID:BAF10534.1	ProteinID:BAS81757.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_1	EMBL:HQ895724	EnsemblPlantsGene:Os02g0831500	EnsemblPlants:Os02t0831500-01	PFAM:PF00534
PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF546	UniProt:Q6K973	SUPFAM:SSF53756	InterPro:Sucrose_synth
InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI00003B04ED	SEG:seg	:	:

Description

SUCROSE SYNTHASE 6Similar to Sucrose synthase. (Os02t0831500-01);Similar to H0211A12.6 protein. (Os02t0831500-02)

Coordinates

chr2:+:35754946..35761216

Molecular Weight (calculated)

96158.3 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.376

Length

846 amino acids

Sequence
(BLAST)

001: MAVGLRRSDS IADMMPEALR QSRYQMKRCF QRYVSQGKRL MKRQQLLDEL DKSVDDKADK DQLLQGFLGY VISSTQEAAV LPPFVAFAVR MNPGIWEFVK
101: VHSANLSVEQ MTPSDYLKNK EALVDDKWGA YDDDSQLEVD FGALDLSTPH LTLPSSIGKG AHLVSRFMSS KLTDNKKPLL DYLLALSHRG DKLMINDILD
201: TVDKLQTALL LAEVYVAGLH PDTNYSEFEQ KFQEWGLEKG WGDTAETCKE TLSSLSEVLQ APDPINMEKF FSTVPCVFTV VIFSIHGYFG QEKVLGMPDT
301: GGQVVYILDQ VRALEDELLQ RIKQQGLNAT PKILVLTRLI PEAKGTKCNV ELEPIENTKH SNILRVPFKT EDGKVLPQWV SRFDIYPYLE RYAQDSSVKI
401: LEILEGKPDL VIGNYTDGNL VASLLTSKLG VTQGTIAHAL EKTKYEDSDI KWRELDHKYH FSCQFTADMI AMNTSDFIIA STYQEIAGSK EKPGQYESHY
501: AFTMPGLCRY ATGINVFDPK FNIAAPGADQ SVYFPFTQKQ KRLTDLHPQI EELLYSKEDN NEHIGHLADR SKPIIFSMAR LDKIKNITGL VEWYGQNKRL
601: RDLVNLVIVG GLLDPSQSKD REEIEEINKM HSLINKYQLV GQIRWIKGQT DRVRNGELYR CIADTKGAFV QPALYEAFGL TVIEAMNCGL PTFATNQGGP
701: AEIIVDEVSG FHINPLNGKE ASDKIADFFQ KCKEDLIYWS KMSTAGLQRI YECYTWQIYA TKVLNMASIY GFWRTLDKEE RQAKQHYLHM FYNLQFRKLA
801: KNVPTLGEQP AQPTESAEPN RIIPRPKERQ VCPFLRNLLK KETGNN

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.