Factsheet for PGSC0003DMT400043117

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g081300.2.1	Tomato	cytosol, nucleus	97.86	92.99
PGSC0003DMT400079728	Potato	cytosol	17.5	83.52
VIT_04s0079g00230.t01	Wine grape	cytosol	75.83	75.21
KRH17270	Soybean	cytosol	74.64	74.64
KRH72916	Soybean	cytosol	74.05	74.05
TraesCS4A01G492600.1	Wheat	cytosol	48.1	72.14
KRH30890	Soybean	cytosol	72.02	71.6
GSMUA_Achr3P13980_001	Banana	cytosol	70.6	70.26
GSMUA_Achr9P21240_001	Banana	cytosol	70.24	69.91
AT5G37180.1	Thale cress	cytosol	67.86	68.1
Os04t0249500-00	Rice	cytosol	68.1	67.77
HORVU7Hr1G120520.1	Barley	cytosol	69.29	67.44
Os04t0309600-01	Rice	cytosol, plasma membrane	67.74	67.42
CDY71780	Canola	cytosol, extracellular	28.57	67.42
Bra039502.1-P	Field mustard	cytosol	67.02	67.26
TraesCS2A01G406700.1	Wheat	cytosol	69.17	67.25
TraesCS2B01G424300.1	Wheat	cytosol	69.05	67.13
TraesCS2D01G403600.1	Wheat	cytosol	69.17	67.09
TraesCS7B01G482200.1	Wheat	cytosol	68.57	66.9
Os02t0831500-01	Rice	plastid	67.26	66.78
TraesCS7D01G552800.1	Wheat	cytosol	68.45	66.78
TraesCS7A01G557600.1	Wheat	cytosol	68.45	66.78
CDY38565	Canola	cytosol	67.02	66.55
CDY26996	Canola	cytosol	66.67	66.19
HORVU6Hr1G094880.6	Barley	cytosol	67.02	65.39
TraesCSU01G082000.1	Wheat	plastid	67.5	65.32
TraesCS6D01G403800.1	Wheat	cytosol	66.9	64.82
OQU77175	Sorghum	plastid	69.17	64.77
TraesCS6B01G466600.1	Wheat	cytosol	66.67	64.52
CDX72985	Canola	cytosol	70.12	63.06
CDX96472	Canola	cytosol	69.88	62.78
KXG31429	Sorghum	cytosol	64.4	62.69
Bra003845.1-P	Field mustard	cytosol	70.12	62.66
Bra015995.1-P	Field mustard	cytosol	70.12	62.46
CDX68228	Canola	cytosol	69.76	62.34
CDY11107	Canola	cytosol	69.64	62.23
AT1G73370.1	Thale cress	cytosol	69.52	62.0
Zm00001d051837_P002	Maize	cytosol	62.62	61.81
PGSC0003DMT400017087	Potato	cytosol	55.12	57.09
Zm00001d050151_P001	Maize	cytosol	9.17	56.2
Zm00001d014119_P001	Maize	cytosol	10.12	55.56
PGSC0003DMT400007505	Potato	cytosol	52.26	54.53
PGSC0003DMT400035264	Potato	cytosol	51.31	53.67
PGSC0003DMT400035262	Potato	cytosol	51.55	53.59
PGSC0003DMT400049042	Potato	cytosol	3.69	21.68
PGSC0003DMT400071807	Potato	cytosol	19.76	15.75
PGSC0003DMT400067951	Potato	nucleus	19.76	15.6
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	9.17	13.82
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	7.38	11.88

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0005985
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757
GO:GO:0030312	GO:GO:0080165	InterPro:Glyco_trans_1	UniProt:M1BE45	PFAM:PF00534	PFAM:PF00862
EnsemblPlantsGene:PGSC0003DMG400016730	PGSC:PGSC0003DMG400016730	EnsemblPlants:PGSC0003DMT400043117	PANTHER:PTHR12526	PANTHER:PTHR12526:SF296	SUPFAM:SSF53756
InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000296F814	SEG:seg	:

Description

Sucrose synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400016730]

Coordinates

chr2:-:36937428..36941862

Molecular Weight (calculated)

95578.3 Da

IEP (calculated)

7.388

GRAVY (calculated)

-0.393

Length

840 amino acids

Sequence
(BLAST)

001: MATTPALKRS ESIADSMPEA LRQSRYHMKR CFAKYIEQGK RMMKLHSLMD ELEKVIDDPA ERNHVLEGLL GYILCTTMEA AVVPPYIAFA TRQNPGFWEY
101: VKVNANDLSV EGITATEYLK FKEMIVDESW AKDEYALEID FGAVDFSTPR LTLSSSIGNG LSYVSKFLTS KLNASSTSAQ CLVDYLLTLN HQGDKLMINE
201: TLSTVSKLQA ALVVAESSIS SIPTDTPYQS FELRFKEWGF EKGWGDTAER VRDTMRTLSE VLQAPDPSNF EKFFGRVPTV FNIVLFSVHG YFGQADVLGL
301: PDTGGQVVYV LDQVVAFEEE MLQRIKQQGL NVKPQILVLT RLIPDAKGTK CNQELEPIKN TKHSHILRVP FRTEKGVLNQ WVSRFDIYPY LERYTQDASD
401: KIIELMEGKP DLIIGNYTDG NLVASLMARK LGITLGTIAH ALEKTKYEDS DIKLKELDPK YHFSCQFTAD LIAMNSADFV ITSTYQEIAG SKDRPGQYES
501: HSAFTLPGLY RVVSGINVFD PKFNIAAPGA DQSVYFPYTE KQKRLTDFRP AIEKLLFSKV DNDEHIGYLE DRTKPILFTM ARLDTVKNTT GLTEWFGKNK
601: KLRSLVNLVV VGGSFDPTKS NDREEAAEIK KMHVLIEKYQ LKGQIRWIAA QTDRYRNSEL YRTIADSKGA FVQPALYEAF GLTVIEAMNC GLPTFATNQG
701: GPAEIIVDGI SGFHIDPNNG DESSNKIVNF FQKSREDPEH WNRISAQGLK RIYECYTWKI YANKVLNMGS IYTFWKTLYK DQKQAKQRYI DTFYNLEFRN
801: LIKDVPIRID EKPEGPKERP ERVKVKPQLS QRRSQSRLQK

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.