Factsheet for TraesCS4A01G492600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079728	Potato	cytosol	22.32	71.02
HORVU6Hr1G094880.6	Barley	cytosol	95.0	61.79
TraesCSU01G082000.1	Wheat	plastid	95.18	61.41
TraesCS6B01G466600.1	Wheat	cytosol	95.0	61.29
TraesCS6D01G403800.1	Wheat	cytosol	94.82	61.25
Os02t0831500-01	Rice	plastid	87.32	57.8
TraesCS2A01G406700.1	Wheat	cytosol	85.54	55.44
TraesCS7A01G557600.1	Wheat	cytosol	84.29	54.82
KXG31429	Sorghum	cytosol	83.04	53.88
Zm00001d051837_P002	Maize	cytosol	81.79	53.82
GSMUA_Achr3P13980_001	Banana	cytosol	76.25	50.59
GSMUA_Achr9P21240_001	Banana	cytosol	76.25	50.59
KRH72916	Soybean	cytosol	72.32	48.21
PGSC0003DMT400043117	Potato	cytosol	72.14	48.1
KRH17270	Soybean	cytosol	72.14	48.1
KRH30890	Soybean	cytosol	71.25	47.22
VIT_04s0079g00230.t01	Wine grape	cytosol	71.25	47.11
Bra039502.1-P	Field mustard	cytosol	70.0	46.83
CDY38565	Canola	cytosol	70.0	46.34
VIT_17s0053g00700.t01	Wine grape	cytosol	74.82	46.25
AT5G37180.1	Thale cress	cytosol	69.11	46.24
CDY26996	Canola	cytosol	69.82	46.22
Solyc02g081300.2.1	Tomato	cytosol, nucleus	72.86	46.15
Solyc03g098290.2.1	Tomato	cytosol, nucleus	70.71	44.44
KRH09470	Soybean	cytosol, plastid	71.96	43.8
KRH38924	Soybean	plastid	71.61	43.54
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	62.14	43.02
TraesCS7A01G158900.1	Wheat	golgi, nucleus	60.18	41.71
Bra003845.1-P	Field mustard	cytosol	69.29	41.28
AT1G73370.1	Thale cress	cytosol	69.29	41.19
CDX96472	Canola	cytosol	68.57	41.07
CDX68228	Canola	cytosol	68.93	41.06
CDX72985	Canola	cytosol	68.21	40.9
CDY11107	Canola	cytosol	68.39	40.74
Bra015995.1-P	Field mustard	cytosol	68.57	40.72
TraesCS4A01G446700.1	Wheat	cytosol	59.11	40.61
TraesCS7A01G040900.2	Wheat	cytosol	59.11	40.61
CDY71780	Canola	cytosol, extracellular	25.71	40.45
TraesCS2A01G168200.1	Wheat	golgi, unclear	60.0	40.43
TraesCS7A01G518200.1	Wheat	cytosol	23.04	13.27
TraesCS6A01G144800.1	Wheat	cytoskeleton, cytosol, nucleus	22.14	12.86
TraesCS3A01G425500.1	Wheat	nucleus	24.64	12.85
TraesCS3A01G015500.1	Wheat	golgi	23.75	12.42
TraesCS4A01G225100.1	Wheat	cytosol	23.04	12.19

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157
GO:GO:0016740	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF546
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	EnsemblPlantsGene:TraesCS4A01G492600	EnsemblPlants:TraesCS4A01G492600.1
TIGR:cd03800	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:741545979..741549601

Molecular Weight (calculated)

63617.2 Da

IEP (calculated)

6.365

GRAVY (calculated)

-0.351

Length

560 amino acids

Sequence
(BLAST)

001: MIWSPAGRCR FQDWGLEKGW GDTTETCRET LNFLSEVLQA PDPINMEKFF SRVPSVFNIV IFSIHGYFGQ EKVLGLPDTG GQVVYILDQV RALEEKLLQR
101: IRKQGLNVTP KILVLTRLIP DAKGTKCNVG LEPVEHTKHS SILRVPFKTN DGKDLRQWVS RFDIYPYLER YAQDSSVKIL DILEGKPDMV IGNYTDGNLV
201: ASLLSSKLGV TQGTIAHALE KTKYEDLDVK WREMDHKYHF SCQLTADMIA MNTSDFIIAS TYQEIARSKD KPGQYESHYA FTMPGLSRYA TGVNVFDPKF
301: NIAAPGADQS VYFPFTQKQA GLTDLHPQIE ELLYSKEDNN EHLGYLGDRS KPIIFSMARL DKVKNITGLV EWYGENKKLR DLVNLVIVGG LLEPSQSNDR
401: EETEEINKMD SLMDMYQLKG QICWIKAQTE RVCNGELYRC IADTRGAFVQ PALYEAFGLT VIKAMNCGLP TFATNQGGPA EIIVNEVSGF HINPLNGKEA
501: SDKIAAFFQK CKEDPTYWNK MSTAGLQRIY ECYTWQIYAT KVLNMGSMYG FWRTLNKEER

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.