Factsheet for PGSC0003DMT400079728

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G492600.1	Wheat	cytosol	71.02	22.32
Solyc03g098290.2.1	Tomato	cytosol, nucleus	98.3	19.42
PGSC0003DMT400043117	Potato	cytosol	83.52	17.5
GSMUA_Achr3P13980_001	Banana	cytosol	80.68	16.82
GSMUA_Achr9P21240_001	Banana	cytosol	79.55	16.59
VIT_17s0053g00700.t01	Wine grape	cytosol	85.23	16.56
Os02t0831500-01	Rice	plastid	75.57	15.72
KRH09470	Soybean	cytosol, plastid	81.25	15.54
KRH38924	Soybean	plastid	80.11	15.31
TraesCS7D01G552800.1	Wheat	cytosol	74.43	15.21
TraesCS7B01G482200.1	Wheat	cytosol	74.43	15.21
HORVU6Hr1G094880.6	Barley	cytosol	74.43	15.21
TraesCS2A01G406700.1	Wheat	cytosol	74.43	15.16
TraesCS2B01G424300.1	Wheat	cytosol	74.43	15.16
PGSC0003DMT400007505	Potato	cytosol	69.32	15.16
TraesCS2D01G403600.1	Wheat	cytosol	74.43	15.13
TraesCS7A01G557600.1	Wheat	cytosol	73.86	15.1
HORVU7Hr1G120520.1	Barley	cytosol	73.86	15.06
TraesCSU01G082000.1	Wheat	plastid	73.86	14.98
PGSC0003DMT400035262	Potato	cytosol	68.75	14.98
KXG31429	Sorghum	cytosol	73.3	14.95
TraesCS6D01G403800.1	Wheat	cytosol	73.3	14.88
TraesCS6B01G466600.1	Wheat	cytosol	73.3	14.86
Zm00001d051837_P002	Maize	cytosol	71.59	14.81
OQU77175	Sorghum	plastid	75.0	14.72
Os04t0249500-00	Rice	cytosol	69.89	14.57
Os04t0309600-01	Rice	cytosol, plasma membrane	69.32	14.46
PGSC0003DMT400035264	Potato	cytosol	64.2	14.07
PGSC0003DMT400017087	Potato	cytosol	57.95	12.58
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	35.8	11.31
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	24.43	8.24
PGSC0003DMT400071807	Potato	cytosol	35.8	5.98
PGSC0003DMT400067951	Potato	nucleus	32.39	5.36
Zm00001d014119_P001	Maize	cytosol	1.14	1.31
PGSC0003DMT400049042	Potato	cytosol	0.0	0.0
Zm00001d050151_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400079728	EnsemblPlantsGene:PGSC0003DMG400031046	Gene3D:3.40.50.2000	InterPro:Glyco_trans_1	PANTHER:PTHR12526	PANTHER:PTHR12526:SF296
PFAM:PF00534	PGSC:PGSC0003DMG400031046	SUPFAM:SSF53756	UniParc:UPI000294A7E0	UniProt:M1D2C2	MapMan:3.1.4.2

Description

Sucrose synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400031046]

Coordinates

chr3:-:44884179..44885195

Molecular Weight (calculated)

19912.7 Da

IEP (calculated)

5.854

GRAVY (calculated)

-0.428

Length

176 amino acids

Sequence
(BLAST)

001: MARFDTVKNL TGLTEWFGKN KKLQNLVNLV IVGGFFDPSK SKDREEAAEI KKMHELIEKY NLKGQMRWIA AQTDKYRNSE LYRTIADTKG AFVQPALYEA
101: FGLTVIEAMN CGLPTFATNQ GGPAEIIVDG VSGFHIDPYN GDESSNKIAD FFEKCKVDSI YWNKISEGGL KRIEEW

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.