Factsheet for GSMUA_Achr9P21240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079728	Potato	cytosol	16.59	79.55
GSMUA_Achr3P13980_001	Banana	cytosol	78.79	78.79
TraesCS4A01G492600.1	Wheat	cytosol	50.59	76.25
Os04t0249500-00	Rice	cytosol	74.64	74.64
Os04t0309600-01	Rice	cytosol, plasma membrane	74.53	74.53
TraesCS7A01G557600.1	Wheat	cytosol	75.95	74.45
TraesCS7B01G482200.1	Wheat	cytosol	75.71	74.22
TraesCS2A01G406700.1	Wheat	cytosol	75.95	74.19
TraesCS2B01G424300.1	Wheat	cytosol	75.71	73.96
TraesCS2D01G403600.1	Wheat	cytosol	75.83	73.9
TraesCS7D01G552800.1	Wheat	cytosol	75.36	73.87
HORVU7Hr1G120520.1	Barley	cytosol	75.36	73.7
Os02t0831500-01	Rice	plastid	72.87	72.69
HORVU6Hr1G094880.6	Barley	cytosol	73.93	72.47
OQU77175	Sorghum	plastid	77.01	72.46
TraesCSU01G082000.1	Wheat	plastid	74.29	72.23
VIT_04s0079g00230.t01	Wine grape	cytosol	72.39	72.14
TraesCS6D01G403800.1	Wheat	cytosol	73.93	71.97
TraesCS6B01G466600.1	Wheat	cytosol	73.34	71.31
KRH17270	Soybean	cytosol	70.26	70.6
PGSC0003DMT400043117	Potato	cytosol	69.91	70.24
KRH72916	Soybean	cytosol	69.43	69.76
VIT_17s0053g00700.t01	Wine grape	cytosol	74.64	69.54
Solyc02g081300.2.1	Tomato	cytosol, nucleus	70.73	67.53
KXG31429	Sorghum	cytosol	68.72	67.21
Zm00001d050151_P001	Maize	cytosol	10.9	67.15
KRH30890	Soybean	cytosol	67.18	67.1
Zm00001d051837_P002	Maize	cytosol	67.65	67.1
Bra039502.1-P	Field mustard	cytosol	66.23	66.79
AT5G37180.1	Thale cress	cytosol	66.11	66.67
CDY38565	Canola	cytosol	66.23	66.08
Solyc03g098290.2.1	Tomato	cytosol, nucleus	69.43	65.77
CDY26996	Canola	cytosol	65.64	65.48
CDY71780	Canola	cytosol, extracellular	27.25	64.61
Zm00001d014119_P001	Maize	cytosol	11.61	64.05
KRH09470	Soybean	cytosol, plastid	69.19	63.48
KRH38924	Soybean	plastid	69.08	63.3
CDX96472	Canola	cytosol	68.48	61.82
CDX72985	Canola	cytosol	68.36	61.78
Bra015995.1-P	Field mustard	cytosol	68.72	61.51
Bra003845.1-P	Field mustard	cytosol	68.25	61.28
CDX68228	Canola	cytosol	67.89	60.96
CDY11107	Canola	cytosol	67.89	60.96
AT1G73370.1	Thale cress	cytosol	67.89	60.83
GSMUA_Achr8P22470_001	Banana	cytosol	55.57	57.97
GSMUA_Achr3P08190_001	Banana	cytosol	42.65	57.69
GSMUA_Achr7P19810_001	Banana	mitochondrion	55.69	57.6
GSMUA_Achr3P08200_001	Banana	mitochondrion	12.09	56.35
GSMUA_Achr3P01900_001	Banana	mitochondrion	54.38	56.25
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	54.03	55.88
GSMUA_Achr6P10890_001	Banana	unclear	53.79	55.71
GSMUA_Achr2P21870_001	Banana	cytosol	53.44	55.34
GSMUA_Achr4P06050_001	Banana	cytosol	20.02	15.96
GSMUA_Achr4P16070_001	Banana	nucleus	20.26	15.8
GSMUA_Achr9P22510_001	Banana	cytosol	19.67	15.65
GSMUA_Achr6P17480_001	Banana	nucleus	18.84	15.24

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr9G21240_001	EnsemblPlants:GSMUA_Achr9P21240_001	EnsemblPlants:GSMUA_Achr9T21240_001
InterPro:Glyco_trans_1	UniProt:M0U283	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF296
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000295113F	SEG:seg

Description

Sucrose synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G21240_001]

Coordinates

chr9:-:26235482..26239175

Molecular Weight (calculated)

95673.7 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.300

Length

844 amino acids

Sequence
(BLAST)

001: MAGAGRTVKR SDSIADALPE ALKQSRYQMK RCFARYVSKG RRLMKNQQLM DELESTMDDK VEKSKLMEGF LGLVICWTQE AVVLPPFVAF AVRQHPGIWE
101: YVKVNAEDLF VDEITASEFL KFKETIYDER WANDEDALEV DFGAFDLSTP HLSLPSSIGN GMQFISKFLS SKLSENPKNA KPLLDYLLAL NHRGEKLMIN
201: GFLDTVSRLQ SALILAEVFV SNLPKNMPFE KFEQRFQEWG LEKGWGDTAE RVKETVNSLS EVLQCPDPVN IEKFLGRVPA IFNIVIFSPH GYFGQADVLG
301: LPDTGGQVVY ILDQVRAFEE ELLLRIKRQG LTITPRILVV TRLIPEARGT KCNQELEAIL NTKHSHILRV PFRTETGVLH QWVSRFDIYP YLERYARDAA
401: AKVLDILEGK PDLIIGNYTD GNLVASLVAS KLGVTQGTIA HALEKTKYED SDVKWKELDP KYHFSCQFTA DMISMNTSDF IITSTYQEIA GSKDRPGQYE
501: SHNAFTMPGL CRFASGINVF DPKFNIASPG ADQSVYFPHT QKHRRLTSFH PAIEELLYSK QDNDEHIGFL ADKRKPIIFS MARLDTVKNI TGLVEWYGKN
601: SRLRELVNLV VVAGFLDPSK SKDREEISEI KKMHSLIDKY QLKGQLRWIA AQNDRVRNGE LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ
701: GGPAEIIADG VSGFHIDPTK GDESSNKIAD FFAKCREDSS YWNRVSTAGL QRINECYTWK IYATKVLNMG TFYGFWRQLN KEEKQAKQRY VKLFYNLQFR
801: KLAKTVPAVD STSEAVPVSS KPLTRPSSQI TRRQALPLFP EIFA

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.