Factsheet for GSMUA_Achr7P19810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19528	Sorghum	mitochondrion	81.99	83.42
HORVU0Hr1G019020.1	Barley	cytosol	15.2	83.22
GSMUA_Achr6P10890_001	Banana	unclear	82.72	82.82
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	82.48	82.48
Os06t0194900-03	Rice	extracellular	81.37	82.18
HORVU7Hr1G033230.2	Barley	mitochondrion	81.37	82.08
TraesCS7A01G158900.1	Wheat	golgi, nucleus	81.25	82.05
GSMUA_Achr2P21870_001	Banana	cytosol	81.86	81.96
GSMUA_Achr3P01900_001	Banana	mitochondrion	81.25	81.25
Zm00001d045042_P014	Maize	cytosol, mitochondrion	81.37	80.78
OQU92441	Sorghum	cytosol	80.27	80.27
Zm00001d047253_P003	Maize	cytosol	80.15	80.15
Os07t0616800-01	Rice	cytosol	80.02	80.02
HORVU2Hr1G030870.1	Barley	plasma membrane	79.9	79.9
Os03t0401300-01	Rice	extracellular	79.78	79.78
TraesCS7D01G036600.2	Wheat	golgi	79.66	79.75
TraesCS7B01G063400.1	Wheat	mitochondrion	80.64	79.66
TraesCS4A01G446700.1	Wheat	cytosol	79.53	79.63
HORVU7Hr1G007220.8	Barley	cytosol	79.53	79.63
TraesCS7A01G040900.2	Wheat	cytosol	79.53	79.63
TraesCS7D01G159800.1	Wheat	mitochondrion	80.51	79.54
TraesCS2B01G194200.1	Wheat	golgi	80.27	78.82
TraesCS2A01G168200.1	Wheat	golgi, unclear	80.27	78.82
TraesCS2D01G175600.1	Wheat	golgi, unclear	80.02	78.49
KRH12615	Soybean	endoplasmic reticulum	77.33	78.29
KRH19379	Soybean	cytosol	77.21	78.26
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	76.84	77.89
KRH37557	Soybean	endoplasmic reticulum	76.59	77.16
CDX88838	Canola	endoplasmic reticulum, golgi	69.61	76.45
VIT_11s0016g00470.t01	Wine grape	cytosol	75.74	75.83
GSMUA_Achr3P08200_001	Banana	mitochondrion	16.79	75.69
PGSC0003DMT400007505	Potato	cytosol	74.63	75.65
Solyc12g009300.1.1	Tomato	nucleus	74.51	75.53
AT3G43190.1	Thale cress	cytosol	74.51	75.25
Bra002332.1-P	Field mustard	cytosol	72.18	74.94
Solyc07g042550.2.1	Tomato	extracellular	73.9	74.91
AT5G20830.1	Thale cress	cytosol	74.02	74.75
CDY16569	Canola	cytosol	73.65	74.66
CDX92432	Canola	cytosol	73.65	74.66
Bra006578.1-P	Field mustard	cytosol	73.65	74.57
CDX70945	Canola	cytosol	73.41	74.32
PGSC0003DMT400035262	Potato	cytosol	73.16	73.89
HORVU5Hr1G050660.1	Barley	cytosol	3.55	72.5
GSMUA_Achr8P22470_001	Banana	cytosol	71.2	71.82
GSMUA_Achr3P08190_001	Banana	cytosol	52.94	69.23
PGSC0003DMT400035264	Potato	cytosol	66.54	67.62
Solyc07g042520.2.1	Tomato	cytosol, extracellular	66.18	67.25
GSMUA_Achr9P21240_001	Banana	cytosol	57.6	55.69
GSMUA_Achr3P13980_001	Banana	cytosol	56.25	54.38
GSMUA_Achr4P06050_001	Banana	cytosol	21.32	16.43
GSMUA_Achr9P22510_001	Banana	cytosol	21.32	16.4
GSMUA_Achr6P17480_001	Banana	nucleus	20.34	15.92
GSMUA_Achr4P16070_001	Banana	nucleus	21.08	15.9

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009791	GO:GO:0009987	GO:GO:0010431	GO:GO:0016043	GO:GO:0016157
GO:GO:0016740	GO:GO:0016757	GO:GO:0051262	EnsemblPlantsGene:GSMUA_Achr7G19810_001	EnsemblPlants:GSMUA_Achr7P19810_001	EnsemblPlants:GSMUA_Achr7T19810_001
InterPro:Glyco_trans_1	UniProt:M0TJ18	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF369
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000295505A	SEG:seg

Description

Sucrose synthase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19810_001]

Coordinates

chr7:-:22844878..22849072

Molecular Weight (calculated)

92678.1 Da

IEP (calculated)

5.830

GRAVY (calculated)

-0.216

Length

816 amino acids

Sequence
(BLAST)

001: MAGRTLTRVL SVKERLSGTL SASPNELLAV FSRYVNQGKG MLQRHQLLAE FEAAFSEDEK EKLKGGVFED VLRAAQEAIV VPPLVALAIR PRPGVWEYVQ
101: VNVNELVVGE LSASEYLQFK EKLVNGESES NFVLELDFEP FNASFPRPSL SKSIGNGVQF LNRHLSSKLF VDKESMYPLL EFLRTHSYKG TVMMLNDKLQ
201: SPRALQSALR KAEQYLLSIP ADTPYSEFNN RFQELGFEKG WGDTVQRVLE TMHLLLDLLE APDPCTLEKF LGTIPMVFNV VILSPHGYFA QANVLGYPDT
301: GGQVVYILDQ VRALENEMLL RIKQQGLDIT PRILIVTRLL PDAVGTTCGE RLEQVDETQH TSILRVPFRN EKGILRKWIS RFDVWPYLET YTEDVAKELA
401: EELQATPDLI IGNYSDGNLV ASLLAHKLGV TQCTIAHALE KTKYPNSDIY WKKFDDQYHF SCQFTADLFA MNHTDFIITS TFQEIAGSKD TVGQYESHTA
501: FTLPGLYRVV HGINVFDPKF NIVSPGADMS VYFPHVEVDK RLTHFHPEIE ELLFSSVEND EHKFVLNDRN KPIIFSMARL DRVKNLTGLV ELYGRNARLR
601: ELANLVVVAG DHGKESKDIE ELAERKKMFG LIEEYNLNGQ IRWISAQMDR VRNGELYRYI ADTKGAFVQP ALYEAFGLTV VEAMTCGLPT FATAYGGPAE
701: IIVHGVSGFH IDPYQKDKAA EILVGFFEKC KEDPTHWDKI SQGGLQRIYE KYTWKLYSER LMTLAGVYGF WKHVSNLERR ETRRYLEMFY ALKYRKLAAS
801: VPLAVDAEST VDGQNV

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.