Factsheet for Os03t0401300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 18372294
extracellular: 26072143
plasma membrane: 27800704

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G019020.1	Barley	cytosol	17.52	95.97
OQU92441	Sorghum	cytosol	95.47	95.47
HORVU7Hr1G007220.8	Barley	cytosol	95.34	95.46
Zm00001d047253_P003	Maize	cytosol	95.34	95.34
TraesCS4A01G446700.1	Wheat	cytosol	95.22	95.34
TraesCS7A01G040900.2	Wheat	cytosol	95.22	95.34
TraesCS7D01G036600.2	Wheat	golgi	95.22	95.34
HORVU5Hr1G050660.1	Barley	cytosol	4.41	90.0
Os07t0616800-01	Rice	cytosol	89.95	89.95
GSMUA_Achr6P10890_001	Banana	unclear	84.07	84.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	83.7	83.7
GSMUA_Achr2P21870_001	Banana	cytosol	83.46	83.56
GSMUA_Achr3P01900_001	Banana	mitochondrion	82.72	82.72
Os06t0194900-03	Rice	extracellular	80.02	80.82
GSMUA_Achr7P19810_001	Banana	mitochondrion	79.78	79.78
KRH19379	Soybean	cytosol	74.63	75.65
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	74.51	75.53
PGSC0003DMT400007505	Potato	cytosol	73.65	74.66
Solyc12g009300.1.1	Tomato	nucleus	73.65	74.66
VIT_11s0016g00470.t01	Wine grape	cytosol	74.51	74.6
KRH12615	Soybean	endoplasmic reticulum	73.65	74.57
Solyc07g042550.2.1	Tomato	extracellular	73.28	74.29
CDX88838	Canola	endoplasmic reticulum, golgi	67.52	74.16
AT3G43190.1	Thale cress	cytosol	72.92	73.64
KRH37557	Soybean	endoplasmic reticulum	73.04	73.58
PGSC0003DMT400035262	Potato	cytosol	72.79	73.51
Bra002332.1-P	Field mustard	cytosol	70.47	73.16
CDY16569	Canola	cytosol	71.94	72.92
CDX92432	Canola	cytosol	71.57	72.55
Bra006578.1-P	Field mustard	cytosol	71.2	72.08
CDX70945	Canola	cytosol	70.96	71.84
AT5G20830.1	Thale cress	cytosol	70.59	71.29
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	69.12	69.72
PGSC0003DMT400035264	Potato	cytosol	65.69	66.75
Solyc07g042520.2.1	Tomato	cytosol, extracellular	65.69	66.75
Os04t0249500-00	Rice	cytosol	53.92	52.13
Os04t0309600-01	Rice	cytosol, plasma membrane	53.68	51.9
Os02t0831500-01	Rice	plastid	53.06	51.18
Os01t0919400-01	Rice	plasma membrane	21.2	15.96
Os08t0301500-01	Rice	plasma membrane	20.34	15.57
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	18.5	14.94
Os11t0236100-01	Rice	cytosol, plasma membrane	6.25	10.02
Os06t0643800-01	Rice	plasma membrane	0.74	3.26

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EntrezGene:4333062
ProteinID:AAK52129.1	ProteinID:ABF96467.1	ProteinID:ABF96468.1	ProteinID:ABF96469.1	EMBL:AK100334	ProteinID:BAF12233.1
ProteinID:BAS84604.1	ProteinID:BAS84605.1	ProteinID:CAA41774.1	ncoils:Coil	ProteinID:EAZ27243.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010037	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	EMBL:HQ895719
EnsemblPlantsGene:Os03g0401300	EnsemblPlants:Os03t0401300-01	UniProt:P31924	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526
PANTHER:PTHR12526:SF398	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0000000B31
RefSeq:XP_015629843.1	RefSeq:XP_015629844.1	:	:	:	:

Description

SUCROSE SYNTHASE 1Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2). (Os03t0401300-01);Similar to Sucrose synthase 1. (Os03t0401300-02);Similar to Sucrose synthase metabolism (Fragment). (Os03t0401300-03)

Coordinates

chr3:-:16301279..16306089

Molecular Weight (calculated)

92913.4 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.274

Length

816 amino acids

Sequence
(BLAST)

001: MGEAAGDRVL SRLHSVRERI GDSLSAHPNE LVAVFTRLVN LGKGMLQAHQ IIAEYNNAIS EADREKLKDG AFEDVLRSAQ EGIVISPWVA LAIRPRPGVW
101: EYVRVNVSEL AVELLTVPEY LQFKEQLVEE GTNNNFVLEL DFEPFNASFP RPSLSKSIGN GVQFLNRHLS SKLFHDKESM YPLLNFLRAH NYKGMTMMLN
201: DRIRSLSALQ GALRKAEEHL SGLSADTPYS EFHHRFQELG LEKGWGDCAK RSQETIHLLL DLLEAPDPST LEKFLGTIPM VFNVVIMSPH GYFAQANVLG
301: YPDTGGQVVY ILDQVRAMEN EMLLRIKQQG LNITPRILIV TRLLPDATGT TCGQRLEKVL GTEHTHILRV PFRTENGIVR KWISRFEVWP YLETFTDDVA
401: HEIAGELQAN PDLIIGNYSD GNLVACLLAH KMGVTHCTIA HALEKTKYPN SDLYWKKFED HYHFSCQFTT DLIAMNHADF IITSTFQEIA GNKDTVGQYE
501: SHMAFTMPGL YRVVHGIDVF DPKFNIVSPG ADMSIYFPYS ESRKRLTSLH PEIEELLYSE VDNNEHKFML KDRNKPIIFS MARLDRVKNL TGLVELYGRN
601: PRLQELVNLV VVCGDHGNPS KDKEEQAEFK KMFDLIEQYN LNGHIRWISA QMNRVRNGEL YRYICDTKGA FVQPAFYEAF GLTVVESMTC GLPTFATAYG
701: GPAEIIVNGV SGFHIDPYQG DKASALLVEF FEKCQEDPSH WTKISQGGLQ RIEEKYTWKL YSERLMTLTG VYGFWKYVSN LERRETRRYL EMLYALKYRT
801: MASTVPLAVE GEPSNK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.