Factsheet for Os07t0616800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

cytosol: 19685898
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G030870.1	Barley	plasma membrane	92.28	92.28
TraesCS2B01G194200.1	Wheat	golgi	92.77	91.1
TraesCS2A01G168200.1	Wheat	golgi, unclear	92.52	90.85
TraesCS2D01G175600.1	Wheat	golgi, unclear	92.52	90.75
Os03t0401300-01	Rice	extracellular	89.95	89.95
GSMUA_Achr6P10890_001	Banana	unclear	83.7	83.8
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	83.33	83.33
GSMUA_Achr2P21870_001	Banana	cytosol	83.21	83.31
GSMUA_Achr3P01900_001	Banana	mitochondrion	83.21	83.21
GSMUA_Achr7P19810_001	Banana	mitochondrion	80.02	80.02
Os06t0194900-03	Rice	extracellular	79.04	79.83
KRH19379	Soybean	cytosol	75.12	76.15
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	74.63	75.65
KRH12615	Soybean	endoplasmic reticulum	73.9	74.81
VIT_11s0016g00470.t01	Wine grape	cytosol	74.63	74.72
PGSC0003DMT400007505	Potato	cytosol	73.41	74.41
Solyc12g009300.1.1	Tomato	nucleus	73.28	74.29
CDX88838	Canola	endoplasmic reticulum, golgi	67.4	74.02
AT3G43190.1	Thale cress	cytosol	73.16	73.89
KRH37557	Soybean	endoplasmic reticulum	73.28	73.83
Solyc07g042550.2.1	Tomato	extracellular	72.3	73.29
CDY16569	Canola	cytosol	72.06	73.04
Bra002332.1-P	Field mustard	cytosol	70.22	72.9
PGSC0003DMT400035262	Potato	cytosol	71.94	72.65
CDX92432	Canola	cytosol	71.57	72.55
AT5G20830.1	Thale cress	cytosol	71.57	72.28
Bra006578.1-P	Field mustard	cytosol	71.32	72.21
CDX70945	Canola	cytosol	71.08	71.96
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	67.65	68.23
Solyc07g042520.2.1	Tomato	cytosol, extracellular	66.05	67.12
PGSC0003DMT400035264	Potato	cytosol	65.93	67.0
Os04t0249500-00	Rice	cytosol	53.06	51.3
Os04t0309600-01	Rice	cytosol, plasma membrane	52.94	51.18
Os02t0831500-01	Rice	plastid	52.94	51.06
Os01t0919400-01	Rice	plasma membrane	21.94	16.51
Os08t0301500-01	Rice	plasma membrane	20.59	15.76
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	18.87	15.23
Os11t0236100-01	Rice	cytosol, plasma membrane	6.13	9.82
Os06t0643800-01	Rice	plasma membrane	0.86	3.8

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EntrezGene:4343910
ProteinID:AAC41682.1	EMBL:AK100306	ProteinID:BAC16012.1	ProteinID:BAC21489.1	ProteinID:BAF22192.1	ProteinID:BAT02657.1
ncoils:Coil	ProteinID:EAZ40663.1	EMBL:EF122474	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_1	EMBL:HQ895721	EnsemblPlantsGene:Os07g0616800	EnsemblPlants:Os07t0616800-01	PFAM:PF00534
PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398	UniProt:Q43009	SUPFAM:SSF53756	InterPro:Sucrose_synth
InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI00000AE50C	RefSeq:XP_015644807.1	:	:

Description

SUCROSE SYNTHASE 3Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 3). (Os07t0616800-01)

Coordinates

chr7:+:25429639..25435132

Molecular Weight (calculated)

93117.0 Da

IEP (calculated)

6.593

GRAVY (calculated)

-0.269

Length

816 amino acids

Sequence
(BLAST)

001: MGETTGERAL TRLHSMRERI GDSLSAHTNE LVAVFSRLVN QGKGMLQPHQ IIAEYNAAIP EGEREKLKDS ALEDVLRGAQ EAIVIPPWIA LAIRPRPGVW
101: EYLRINVSQL GVEELSVPEY LQFKEQLVDG STQNNFVLEL DFEPFNASFP RPSLSKSIGN GVQFLNRHLS SKLFHDKESM YPLLNFLRAH NYKGMTMMLN
201: DRIRSLDALQ GALRKAEKHL AGITADTPYS EFHHRFQELG LEKGWGDCAQ RVRETIHLLL DLLEAPEPSA LEKFLGTIPM VFNVVILSPH GYFAQANVLG
301: YPDTGGQVVY ILDQVRAMEN EMLLRIKQQG LNITPRILIV TRLLPDAHGT TCGQRLEKVL GTEHTHILRV PFRTENGTVR KWISRFEVWP YLETYTDDVA
401: HEISGELQAT PDLIIGNYSD GNLVACLLAH KLGVTHCTIA HALEKTKYPN SDLYWKKFED HYHFSCQFTA DLIAMNHADF IITSTFQEIA GNKETVGQYE
501: SHMAFTMPGL YRVVHGIDVF DPKFNIVSPG ADMSIYFPFT ESQKRLTSLH LEIEELLFSD VENTEHKFVL KDKKKPIIFS MARLDHVKNL TGLVELYGRN
601: PRLQELVNLV VVCGDHGKES KDKEEQAEFK KMFNLIEQYN LNGHIRWISA QMNRVRNGEL YRYICDMRGA FVQPALYEAF GLTVIEAMTC GLPTFATAYG
701: GPAEIIVHGV SGYHIDPYQN DKASALLVEF FEKCQEDPNH WIKISQGGLQ RIEEKYTWKL YSERLMTLSG VYGFWKYVTN LDRRETRRYL EMLYALKYRK
801: MATTVPLAIE GEASTK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.