Factsheet for GSMUA_Achr3P01900_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	94.85	94.85
GSMUA_Achr6P10890_001	Banana	unclear	94.24	94.36
GSMUA_Achr2P21870_001	Banana	cytosol	93.87	93.99
HORVU0Hr1G019020.1	Barley	cytosol	15.69	85.91
HORVU5Hr1G050660.1	Barley	cytosol	4.17	85.0
Os07t0616800-01	Rice	cytosol	83.21	83.21
HORVU2Hr1G030870.1	Barley	plasma membrane	82.84	82.84
Os03t0401300-01	Rice	extracellular	82.72	82.72
HORVU7Hr1G033230.2	Barley	mitochondrion	81.99	82.69
KXG19528	Sorghum	mitochondrion	81.25	82.67
Zm00001d047253_P003	Maize	cytosol	82.6	82.6
OQU92441	Sorghum	cytosol	82.6	82.6
TraesCS7A01G158900.1	Wheat	golgi, nucleus	81.74	82.55
TraesCS7D01G036600.2	Wheat	golgi	82.11	82.21
HORVU7Hr1G007220.8	Barley	cytosol	82.11	82.21
TraesCS7A01G040900.2	Wheat	cytosol	81.99	82.09
TraesCS4A01G446700.1	Wheat	cytosol	81.99	82.09
TraesCS2A01G168200.1	Wheat	golgi, unclear	83.58	82.07
TraesCS2D01G175600.1	Wheat	golgi, unclear	83.58	81.97
TraesCS2B01G194200.1	Wheat	golgi	83.21	81.71
Os06t0194900-03	Rice	extracellular	80.64	81.44
GSMUA_Achr7P19810_001	Banana	mitochondrion	81.25	81.25
Zm00001d045042_P014	Maize	cytosol, mitochondrion	81.37	80.78
TraesCS7B01G063400.1	Wheat	mitochondrion	81.13	80.15
TraesCS7D01G159800.1	Wheat	mitochondrion	81.0	80.02
KRH19379	Soybean	cytosol	75.98	77.02
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.12	76.15
VIT_11s0016g00470.t01	Wine grape	cytosol	75.86	75.95
KRH12615	Soybean	endoplasmic reticulum	74.14	75.06
CDX88838	Canola	endoplasmic reticulum, golgi	68.26	74.97
PGSC0003DMT400007505	Potato	cytosol	73.53	74.53
Solyc12g009300.1.1	Tomato	nucleus	73.41	74.41
Solyc07g042550.2.1	Tomato	extracellular	73.41	74.41
KRH37557	Soybean	endoplasmic reticulum	73.65	74.2
AT3G43190.1	Thale cress	cytosol	73.28	74.01
Bra002332.1-P	Field mustard	cytosol	70.96	73.66
PGSC0003DMT400035262	Potato	cytosol	72.67	73.39
CDY16569	Canola	cytosol	72.3	73.29
CDX92432	Canola	cytosol	72.18	73.17
AT5G20830.1	Thale cress	cytosol	72.06	72.77
Bra006578.1-P	Field mustard	cytosol	71.81	72.7
CDX70945	Canola	cytosol	71.57	72.46
GSMUA_Achr8P22470_001	Banana	cytosol	71.57	72.19
GSMUA_Achr3P08200_001	Banana	mitochondrion	15.93	71.82
GSMUA_Achr3P08190_001	Banana	cytosol	54.04	70.67
PGSC0003DMT400035264	Potato	cytosol	66.91	68.0
Solyc07g042520.2.1	Tomato	cytosol, extracellular	66.79	67.87
GSMUA_Achr3P13980_001	Banana	cytosol	56.5	54.62
GSMUA_Achr9P21240_001	Banana	cytosol	56.25	54.38
GSMUA_Achr4P06050_001	Banana	cytosol	19.98	15.39
GSMUA_Achr4P16070_001	Banana	nucleus	20.34	15.34
GSMUA_Achr9P22510_001	Banana	cytosol	19.85	15.27
GSMUA_Achr6P17480_001	Banana	nucleus	19.36	15.15

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr3G01900_001	EnsemblPlants:GSMUA_Achr3P01900_001	EnsemblPlants:GSMUA_Achr3T01900_001
InterPro:Glyco_trans_1	UniProt:M0SB08	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0002959410	SEG:seg

Description

Sucrose synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G01900_001]

Coordinates

chr3:-:1270631..1276142

Molecular Weight (calculated)

92979.4 Da

IEP (calculated)

6.852

GRAVY (calculated)

-0.293

Length

816 amino acids

Sequence
(BLAST)

001: MSQRTLTRAH SVRERIGDSL SSHPNELVAL FSRFVHQGKG MLQPHQLLAE YGAVFSEADR EKLKDGAFED VIQAAQEAIV IPPWVALAIR PRPGVWEYVR
101: VNISELAVEE LTVPEYLQFK EELADGSSQN SNFVLELDFE PFNASFPRPS LSKSIGNGVQ FLNRHLSSKL FQDKESLYPL LNFLRKHNYK GMSMMLNDRI
201: QSLSALRAAL RKAEQHLLSI PSKTPYSEFN HRFQELGLEK GWGDTARRVY ENIHLLLDLL EAPDPTTLEN FLGIIPMMFN VVILSPHGYF AQANVLGYPD
301: TGGQVVYILD QVRALENEML LRIKRQGLHI TPRILIVTRL LPDAVGTTCG QRLEKVLGTE HTHILRVPFR TENGIVRKWI SRFEVWPYLE TYTEDVANEL
401: AAELQATPDL IIGNYSDGNL VSTLLAHKLG VTQCTIAHAL EKTKYPNSDI YWKKFENQYH FSCQFTADLI AMNHADFIIT STFQEIAGSK DTVGQYESHT
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYTEKQ KRLTSLHPEI EELLFNPKDN TEHKGVLNDT KKPIIFSMAR LDRVKNLTGL VEFYGKNDRL
601: KELVNLVVVG GDHGKESKDR EEQAEFKKMY SLIEKYNLHG HIRWISAQMN RVRNGELYRY IADSRGAFVQ PAFYEAFGLT VIESMTCGLP TFATVHGGPG
701: EIIVDGVSGF HIDPYQGDKA ANIILNFFGK CKEDPTYWDK ISQGGLRRIE EKYTWKLYSE RLMTLSGVYG FWKYVSNLDR RETRRYLEMF YALKYRNLAE
801: SVPLAADGEA AFNGAK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.