Factsheet for TraesCS7A01G158900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

golgi: 25769308
nucleus: 28628250

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 28628250 doi

T Bonnot, E Bancel, D Alvarez, M Davanture, J Boudet, M Pailloux, M Zivy, C Ravel, P Martre

LIMOS, CNRS, Université Blaise Pascal, Aubière, 63173, France., UMR GDEC, INRA, Université Clermont Auvergne, 5 chemin de Beaulieu, Clermont-Ferrand, 63039, France., UMR GQE, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Gif-sur-Yvette, 91190, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G033230.2	Barley	mitochondrion	98.64	98.52
TraesCS7D01G159800.1	Wheat	mitochondrion	98.64	96.49
TraesCS7B01G063400.1	Wheat	mitochondrion	98.51	96.37
KXG19528	Sorghum	mitochondrion	92.95	93.64
Os06t0194900-03	Rice	extracellular	93.07	93.07
Zm00001d045042_P014	Maize	cytosol, mitochondrion	92.82	91.24
GSMUA_Achr3P01900_001	Banana	mitochondrion	82.55	81.74
GSMUA_Achr6P10890_001	Banana	unclear	82.3	81.6
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	82.18	81.37
GSMUA_Achr2P21870_001	Banana	cytosol	82.05	81.35
GSMUA_Achr7P19810_001	Banana	mitochondrion	82.05	81.25
TraesCS7A01G040900.2	Wheat	cytosol	79.33	78.65
TraesCS4A01G446700.1	Wheat	cytosol	79.33	78.65
TraesCS2A01G168200.1	Wheat	golgi, unclear	80.07	77.86
KRH19379	Soybean	cytosol	75.87	76.15
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.5	75.78
CDX88838	Canola	endoplasmic reticulum, golgi	69.18	75.24
KRH12615	Soybean	endoplasmic reticulum	75.0	75.19
KRH37557	Soybean	endoplasmic reticulum	74.88	74.69
PGSC0003DMT400007505	Potato	cytosol	74.38	74.66
VIT_11s0016g00470.t01	Wine grape	cytosol	75.25	74.6
Solyc12g009300.1.1	Tomato	nucleus	74.01	74.29
AT3G43190.1	Thale cress	cytosol	74.13	74.13
Bra002332.1-P	Field mustard	cytosol	71.66	73.66
Solyc07g042550.2.1	Tomato	extracellular	73.02	73.29
AT5G20830.1	Thale cress	cytosol	73.14	73.14
Bra006578.1-P	Field mustard	cytosol	72.9	73.08
CDY16569	Canola	cytosol	72.77	73.04
CDX92432	Canola	cytosol	72.65	72.92
PGSC0003DMT400035262	Potato	cytosol	72.52	72.52
CDX70945	Canola	cytosol	72.28	72.46
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	69.55	69.47
PGSC0003DMT400035264	Potato	cytosol	65.47	65.88
Solyc07g042520.2.1	Tomato	cytosol, extracellular	65.1	65.5
TraesCS4A01G492600.1	Wheat	cytosol	41.71	60.18
TraesCS7A01G557600.1	Wheat	cytosol	55.94	52.5
TraesCS2A01G406700.1	Wheat	cytosol	55.32	51.74
TraesCS7A01G518200.1	Wheat	cytosol	19.55	16.26
TraesCS6A01G144800.1	Wheat	cytoskeleton, cytosol, nucleus	18.81	15.77
TraesCS3A01G425500.1	Wheat	nucleus	20.92	15.74
TraesCS3A01G015500.1	Wheat	golgi	20.67	15.59
TraesCS4A01G225100.1	Wheat	cytosol	20.05	15.31

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009791	GO:GO:0009987	GO:GO:0010431	GO:GO:0016043	GO:GO:0016157
GO:GO:0016740	GO:GO:0051262	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526
PANTHER:PTHR12526:SF369	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	EnsemblPlantsGene:TraesCS7A01G158900
EnsemblPlants:TraesCS7A01G158900.1	TIGR:cd03800	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:-:115204109..115208145

Molecular Weight (calculated)

92417.7 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.274

Length

808 amino acids

Sequence
(BLAST)

001: MAAKLTRLHS LRERLGATFS SHPNELIALF SRYVHQGKGM LQRHQLLAEF DELFESDKEK YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS
101: ELAVEELTVS EYLAFKEQLV DEHASSKFVL ELDFEPFNAS FPRPSMSKSI GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNYKGTTMM LNDRIQSLRG
201: LQSALRKAEE YLVSIPEDTP SSEFNHRFQE LGLEKGWGDT AKRVHDTIHL LLDLLEAPDP ASLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV
301: VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRLEK VIGTEHTDIL RVPFRTENGI LRKWISRFDV WPYLETYTED VANELMREMQ
401: TKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDSVGQ YESHIAFTLP
501: DLYRVVHGID VFDPKFNIVS PGADMTVYFP YTETDKRLTA FHSEIEELLY SDVENDEHKF VLKDRNKPII FSMARLDRVK NMTGLVEMYG KNAHLKDLAN
601: LVIVAGDHGK ESKDREEQAE FKRMYSLIEE YKLKGHIRWI SAQMNRVRNG ELYRYICDTK GAFVQPAFYE AFGLTVIEAM TCGLPTIATC HGGPAEIIVN
701: GVSGVHIDPY HSDKAADILV NFFEKCSEDP SYWDKMSEGG LKRIYEKYTW KLYSERLMTL TGVYGFWKYV SNLERRETRR YLEMFYALKY RSLAAAVPLA
801: VDGENSDN

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.