Factsheet for PGSC0003DMT400007505

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g009300.1.1	Tomato	nucleus	98.26	98.26
PGSC0003DMT400035262	Potato	cytosol	90.93	90.59
VIT_11s0016g00470.t01	Wine grape	cytosol	82.73	81.72
KRH19379	Soybean	cytosol	81.61	81.61
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	81.49	81.49
CDX88838	Canola	endoplasmic reticulum, golgi	74.53	80.75
HORVU0Hr1G019020.1	Barley	cytosol	14.91	80.54
AT3G43190.1	Thale cress	cytosol	80.62	80.32
KRH12615	Soybean	endoplasmic reticulum	79.5	79.4
Bra002332.1-P	Field mustard	cytosol	77.52	79.39
Bra006578.1-P	Field mustard	cytosol	79.01	78.91
CDX70945	Canola	cytosol	78.88	78.78
CDY16569	Canola	cytosol	78.76	78.76
CDX92432	Canola	cytosol	78.63	78.63
KRH37557	Soybean	endoplasmic reticulum	78.76	78.27
AT5G20830.1	Thale cress	cytosol	78.39	78.09
KXG19528	Sorghum	mitochondrion	75.03	75.31
HORVU5Hr1G050660.1	Barley	cytosol	3.73	75.0
GSMUA_Achr7P19810_001	Banana	mitochondrion	75.65	74.63
HORVU7Hr1G033230.2	Barley	mitochondrion	74.78	74.41
TraesCS7A01G158900.1	Wheat	golgi, nucleus	74.66	74.38
GSMUA_Achr6P10890_001	Banana	unclear	75.16	74.23
Os06t0194900-03	Rice	extracellular	74.41	74.13
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	75.03	74.02
TraesCS7D01G036600.2	Wheat	golgi	74.78	73.86
OQU92441	Sorghum	cytosol	74.78	73.77
HORVU7Hr1G007220.8	Barley	cytosol	74.66	73.74
GSMUA_Achr2P21870_001	Banana	cytosol	74.66	73.74
TraesCS7A01G040900.2	Wheat	cytosol	74.66	73.74
TraesCS4A01G446700.1	Wheat	cytosol	74.66	73.74
Os03t0401300-01	Rice	extracellular	74.66	73.65
Zm00001d047253_P003	Maize	cytosol	74.66	73.65
HORVU2Hr1G030870.1	Barley	plasma membrane	74.66	73.65
GSMUA_Achr3P01900_001	Banana	mitochondrion	74.53	73.53
Os07t0616800-01	Rice	cytosol	74.41	73.41
Zm00001d045042_P014	Maize	cytosol, mitochondrion	74.53	72.99
TraesCS2A01G168200.1	Wheat	golgi, unclear	74.91	72.56
PGSC0003DMT400035264	Potato	cytosol	72.3	72.48
TraesCS2B01G194200.1	Wheat	golgi	74.78	72.44
TraesCS7B01G063400.1	Wheat	mitochondrion	74.29	72.4
TraesCS2D01G175600.1	Wheat	golgi, unclear	74.78	72.36
TraesCS7D01G159800.1	Wheat	mitochondrion	74.16	72.28
PGSC0003DMT400079728	Potato	cytosol	15.16	69.32
PGSC0003DMT400017087	Potato	cytosol	69.32	68.8
PGSC0003DMT400043117	Potato	cytosol	54.53	52.26
PGSC0003DMT400049042	Potato	cytosol	3.48	19.58
PGSC0003DMT400071807	Potato	cytosol	20.25	15.46
PGSC0003DMT400067951	Potato	nucleus	19.5	14.76
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	8.32	12.03
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	6.58	10.15

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	EntrezGene:102577594	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000
ProteinID:AAA33841	ProteinID:AAA33841.1	ProteinID:AAA63685	ProteinID:AAA63685.1	ProteinID:AAA97571	ProteinID:AAA97571.1
ProteinID:ABG91018	ProteinID:ABG91018.1	EMBL:AJ537575	ProteinID:CAD61188	ProteinID:CAD61188.1	EMBL:DQ793135
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	UniProt:M0ZT40
EMBL:M18745	PFAM:PF00534	PFAM:PF00862	EnsemblPlantsGene:PGSC0003DMG400002895	PGSC:PGSC0003DMG400002895	EnsemblPlants:PGSC0003DMT400007505
PANTHER:PTHR12526	PANTHER:PTHR12526:SF391	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470
EMBL:U21129	EMBL:U24087	UniParc:UPI0002956DA6	RefSeq:XP_006345244.1	SEG:seg	:

Description

Sucrose synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400002895]

Coordinates

chr12:+:3085137..3091456

Molecular Weight (calculated)

92476.5 Da

IEP (calculated)

6.224

GRAVY (calculated)

-0.246

Length

805 amino acids

Sequence
(BLAST)

001: MAERVLTRVH SLRERVDATL AAHRNEILLF LSRIESHGKG ILKPHELLAE FDAIRQDDKN KLNEHAFEEL LKSTQEAIVL PPWVALAIRL RPGVWEYIRV
101: NVNALVVEEL SVPEYLQFKE ELVDGASNGN FVLELDFEPF TASFPKPTLT KSIGNGVEFL NRHLSAKMFH DKESMTPLLE FLRAHHYKGK TMMLNDRIQN
201: SNTLQNVLRK AEEYLIMLPP DTPYFEFEHK FQEIGLEKGW GDTAERVLEM VCMLLDLLEA PDSCTLEKFL GRIPMVFNVV ILSPHGYFAQ ENVLGYPDTG
301: GQVVYILDQV PALEREMLKR IKEQGLDIIP RILIVTRLLP DAVGTTCGQR IEKVYGAEHS HILRVPFRTE KGIVRKWISR FEVWPYMETF IEDVAKEISA
401: ELQAKPDLII GNYSEGNLAA SLLAHKLGVT QCTIAHALEK TKYPDSDIYW KKFDEKYHFS SQFTADLIAM NHTDFIITST FQEIAGSKDT VGQYESHMAF
501: TMPGLYRVVH GINVFDPKFN IVSPGADINL YFSYSETEKR LTAFHPEIDE LLYSDVENDE HLCVLKDRTK PILFTMARLD RVKNLTGLVE WYAKNPRLRG
601: LVNLVVVGGD RRKESKDLEE QAEMKKMYEL IETHNLNGQF RWISSQMNRV RNGELYRYIA DTKGAFVQPA FYEAFGLTVV EAMTCGLPTF ATNHGGPAEI
701: IVHGKSGFHI DPYHGEQAAD LLADFFEKCK KDPSHWETIS MGGLKRIEEK YTWQIYSERL LTLAAVYGFW KHVSKLDRLE IRRYLEMFYA LKYRKMAEAV
801: PLAAE

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.