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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006578.1-P Field mustard cytosol 99.13 99.13
CDX88838 Canola endoplasmic reticulum, golgi 90.32 97.98
CDY16569 Canola cytosol 96.53 96.65
CDX92432 Canola cytosol 96.53 96.65
AT5G20830.1 Thale cress cytosol 93.55 93.32
KRH19379 Soybean cytosol 84.12 84.22
KRH02557 Soybean cytosol, endoplasmic reticulum, extracellular, mitochondrion 83.75 83.85
KRH12615 Soybean endoplasmic reticulum 82.38 82.38
HORVU0Hr1G019020.1 Barley cytosol 15.14 81.88
KRH37557 Soybean endoplasmic reticulum 81.14 80.74
VIT_11s0016g00470.t01 Wine grape cytosol 80.27 79.39
PGSC0003DMT400007505 Potato cytosol 78.78 78.88
Solyc12g009300.1.1 Tomato nucleus 78.41 78.51
Solyc07g042550.2.1 Tomato extracellular 77.79 77.89
PGSC0003DMT400035262 Potato cytosol 77.3 77.1
KXG19528 Sorghum mitochondrion 73.2 73.57
GSMUA_Achr7P19810_001 Banana mitochondrion 74.32 73.41
Os06t0194900-03 Rice extracellular 72.83 72.65
GSMUA_Achr2P21870_001 Banana cytosol 73.33 72.52
GSMUA_Achr6P10890_001 Banana unclear 73.33 72.52
TraesCS7A01G158900.1 Wheat golgi, nucleus 72.46 72.28
HORVU7Hr1G033230.2 Barley mitochondrion 72.46 72.19
Zm00001d045042_P014 Maize cytosol, mitochondrion 73.45 72.02
GSMUA_Achr10P... Banana cytosol, mitochondrion 72.46 71.57
OQU92441 Sorghum cytosol 72.46 71.57
GSMUA_Achr3P01900_001 Banana mitochondrion 72.46 71.57
Zm00001d047253_P003 Maize cytosol 72.46 71.57
TraesCS7D01G036600.2 Wheat golgi 71.96 71.17
HORVU7Hr1G007220.8 Barley cytosol 71.96 71.17
Os07t0616800-01 Rice cytosol 71.96 71.08
TraesCS7A01G040900.2 Wheat cytosol 71.84 71.04
TraesCS4A01G446700.1 Wheat cytosol 71.84 71.04
HORVU2Hr1G030870.1 Barley plasma membrane 71.84 70.96
Os03t0401300-01 Rice extracellular 71.84 70.96
TraesCS7B01G063400.1 Wheat mitochondrion 72.08 70.34
TraesCS7D01G159800.1 Wheat mitochondrion 71.96 70.22
TraesCS2B01G194200.1 Wheat golgi 72.33 70.16
TraesCS2A01G168200.1 Wheat golgi, unclear 72.33 70.16
Solyc07g042520.2.1 Tomato cytosol, extracellular 69.85 70.11
TraesCS2D01G175600.1 Wheat golgi, unclear 72.08 69.83
PGSC0003DMT400035264 Potato cytosol 69.48 69.74
CDY22042 Canola cytosol, mitochondrion 67.74 67.32
CDY52781 Canola mitochondrion 67.62 67.2
CDX85398 Canola cytosol 66.87 66.79
CDX86250 Canola cytosol 65.01 66.5
HORVU5Hr1G050660.1 Barley cytosol 3.1 62.5
CDY38565 Canola cytosol 53.97 51.42
CDY26996 Canola cytosol 53.85 51.3
CDY71780 Canola cytosol, extracellular 22.21 50.28
CDX72985 Canola cytosol 55.83 48.18
CDX96472 Canola cytosol 55.71 48.02
CDX68228 Canola cytosol 54.84 47.02
CDY11107 Canola cytosol 54.84 47.02
CDX87785 Canola cytosol 9.31 46.58
CDY46981 Canola cytosol, nucleus, plastid 15.01 35.28
CDX73329 Canola cytosol 2.36 25.0
CDX94270 Canola nucleus 11.17 19.03
CDX70382 Canola cytosol 20.1 16.84
CDX88168 Canola nucleus 19.73 16.56
CDX80498 Canola cytosol 19.73 16.44
CDY35815 Canola cytosol 19.48 16.25
CDX92473 Canola cytosol 19.35 16.15
CDX89776 Canola cytosol 21.22 16.07
CDY18270 Canola cytosol 21.22 16.06
CDX78411 Canola cytosol 20.47 15.88
CDY45096 Canola cytosol 19.11 15.84
CDY41124 Canola cytosol 19.98 15.38
CDY69825 Canola cytosol 0.62 2.87
Protein Annotations
KEGG:00500+2.4.1.13Gene3D:1.20.120.1230MapMan:3.1.4.2Gene3D:3.10.450.330Gene3D:3.40.50.2000GO:A0A078C253
EnsemblPlants:CDX70945ProteinID:CDX70945ProteinID:CDX70945.1GO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0005985GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016157GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00140859001InterPro:Glyco_trans_1PFAM:PF00534PFAM:PF00862PANTHER:PTHR12526PANTHER:PTHR12526:SF391
MetaCyc:PWY-3801SUPFAM:SSF53756InterPro:Sucrose_synthInterPro:Sucrose_synthase_pln/cynTIGRFAMs:TIGR02470UniParc:UPI0004EB7D9D
SEG:seg:::::
Description
BnaC03g10290D
Coordinates
chrLK031791:-:2875262..2879691
Molecular Weight (calculated)
92484.2 Da
IEP (calculated)
5.912
GRAVY (calculated)
-0.309
Length
806 amino acids
Sequence
(BLAST)
001: MVNGVLTRVH SQRERLNETL VAQRNEVLAL LSRVEAKGKG ILQQNQIIAE FEALPEETQK KIEGGAFFDL LKTTQEAIVL PPWVALAVRP RPGVWEYIRV
101: NLHALVVEEL QPAEFLHFKE ELVDGVKNGN FTLELDFEPF NASVPRPTLP KYIGDGVEFL NRHLSAKLFH EKDSLLPLLK FLQLHSHQGK TLMLNEKIQN
201: LNTLQHILRK AEEYLAELSP ETPYEDFEAK FEEIGLERGW GNNAERVLDM LRLLLDLLEA PDPCTLETFL GRIPMVFNVV ILSPHGYFAQ DNVLGYPDTG
301: GQVVYILDQV RALETEMLQR IKQQGLNFTP RILILTRLLP DAVGTTCGER LERVDGSEYC DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDAAVELAK
401: ELKGKPDLII GNYSDGNLVA SLLAHKLGVT QCTIAHALEK TKYPDSDIYW KKLDDKYHFS CQFTADLFAM NHTDFIITST LQEIAGSKDT VGQYESHTAF
501: TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFPYTEEKRR LTKFHPEIEE LLYSDVENQE HLCVLKDKKK PILFTMARLD RVKNLSGLVE WYGKNKRLRE
601: LVNLVVVGGD RRKESKDNEE KAEMKKIYDL IDEYKLNGQF RWISSQMNRV RNGELYRYIC DTKGAFVQPA LYEAFGLTVV EAMTCGLPTF ATCKGGPAEI
701: IVHGKSGFHI DPYHGEQAAD TLADFFTKCK EDPSHWDEIS KGGLQRIEEK YTWQIYSQRL LTLTGVYGFW KHVSNLDRLE SRRYLEMFYA LKYRPLAKAV
801: PLAEEE
Best Arabidopsis Sequence Match ( AT5G20830.3 )
(BLAST)
001: MANAERMITR VHSQRERLNE TLVSERNEVL ALLSRVEAKG KGILQQNQII AEFEALPEQT RKKLEGGPFF DLLKSTQEAI VLPPWVALAV RPRPGVWEYL
101: RVNLHALVVE ELQPAEFLHF KEELVDGVKN GNFTLELDFE PFNASIPRPT LHKYIGNGVD FLNRHLSAKL FHDKESLLPL LKFLRLHSHQ GKNLMLSEKI
201: QNLNTLQHTL RKAEEYLAEL KSETLYEEFE AKFEEIGLER GWGDNAERVL DMIRLLLDLL EAPDPCTLET FLGRVPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALEIEML QRIKQQGLNI KPRILILTRL LPDAVGTTCG ERLERVYDSE YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TYTEDAAVEL
401: SKELNGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDDKYH FSCQFTADIF AMNHTDFIIT STFQEIAGSK ETVGQYESHT
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFPYTEEK RRLTKFHSEI EELLYSDVEN KEHLCVLKDK KKPILFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELANLVVVG GDRRKESKDN EEKAEMKKMY DLIEEYKLNG QFRWISSQMD RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCKGGPA
701: EIIVHGKSGF HIDPYHGDQA ADTLADFFTK CKEDPSHWDE ISKGGLQRIE EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LEARRYLEMF YALKYRPLAQ
801: AVPLAQDD
Arabidopsis Description
SUS1Sucrose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P49040]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.