Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94270 | Canola | nucleus | 52.63 | 8.46 |
| CDX80498 | Canola | cytosol | 60.53 | 4.76 |
| CDX88168 | Canola | nucleus | 59.21 | 4.69 |
| CDX70382 | Canola | cytosol | 59.21 | 4.68 |
| CDY35815 | Canola | cytosol | 57.89 | 4.55 |
| CDX92473 | Canola | cytosol | 57.89 | 4.55 |
| CDY45096 | Canola | cytosol | 57.89 | 4.53 |
| CDX78411 | Canola | cytosol | 59.21 | 4.33 |
| CDY41124 | Canola | cytosol | 56.58 | 4.11 |
| CDX89776 | Canola | cytosol | 56.58 | 4.04 |
| CDY18270 | Canola | cytosol | 56.58 | 4.04 |
| CDY71780 | Canola | cytosol, extracellular | 15.79 | 3.37 |
| VIT_18s0075g00350.t01 | Wine grape | cytosol | 5.26 | 2.82 |
| CDY52781 | Canola | mitochondrion | 26.32 | 2.47 |
| CDY22042 | Canola | cytosol, mitochondrion | 26.32 | 2.47 |
| CDX88838 | Canola | endoplasmic reticulum, golgi | 23.68 | 2.42 |
| CDX70945 | Canola | cytosol | 25.0 | 2.36 |
| CDX86250 | Canola | cytosol | 23.68 | 2.28 |
| CDX92432 | Canola | cytosol | 23.68 | 2.24 |
| CDY16569 | Canola | cytosol | 23.68 | 2.24 |
| CDX85398 | Canola | cytosol | 23.68 | 2.23 |
| CDX72985 | Canola | cytosol | 22.37 | 1.82 |
| CDX68228 | Canola | cytosol | 22.37 | 1.81 |
| CDY11107 | Canola | cytosol | 22.37 | 1.81 |
| CDY38565 | Canola | cytosol | 19.74 | 1.77 |
| CDX96472 | Canola | cytosol | 21.05 | 1.71 |
| CDY26996 | Canola | cytosol | 18.42 | 1.65 |
| CDY46981 | Canola | cytosol, nucleus, plastid | 6.58 | 1.46 |
| CDX87785 | Canola | cytosol | 0.0 | 0.0 |
| CDY69825 | Canola | cytosol | 0.0 | 0.0 |
| VIT_18s0075g00340.t01 | Wine grape | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX73329 | EnsemblPlantsGene:GSBRNA2T00106452001 | Gene3D:3.40.50.2000 | ProteinID:CDX73329 | ProteinID:CDX73329.1 | UniParc:UPI0004EDB0C6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g27770D
Coordinates
chrLK031798:+:1734123..1734518
Molecular Weight (calculated)
8570.5 Da
IEP (calculated)
4.974
GRAVY (calculated)
0.136
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: METPREECLG TAMLTSLRID LSRINLYIVL ISLHGLIRGE NMEFGPDSDI GGHVQYVVEF ARTLGSMPRV YRVDLC
0001: MVGNDWVNSY LEAILAAEPG IANSKPPGTG DSKSSLLLRE RGHFSPTRYF VEEVITGFDE TDLHRSWVQA AATRSPQERN TRLENLCWRI WNLARQKKQV
0101: EGKNAKREAK REREREKARR EVTAEMSEDF SEGEKADLPG EIPTPSDNNT KGRMSRISSV DVFENWFAQH KEKKLYIVLI SLHGLIRGEN MELGRDSDTG
0201: GQVKYVVELA RALGSMPGVY RVDLLTRQVT APDVDSSYSE PSEMLNPIDT DIEQENGESS GAYIIRIPFG PKDKYVPKEL LWPHIPEFVD RALSHIMQIS
0301: KVLGEQIGGG QQVWPVSIHG HYADAGDSTA LLSGALNVPM VFTGHSLGRD KLEQLLKQGR PKEEINSNYK IWRRIEAEEL CLDASEIVIT STRQEVDEQW
0401: RLYDGFDPVL ERKLRARMKR GVSCLGRFMP RMVVIPPGME FHHIVPHDVD ADGDDENPQT ADPPIWSEIM RFFSNPRKPM ILALARPDPK KNLVTLVKAF
0501: GECRPLRELA NLTLIMGNRN DIDELSSTNS SVLLSILKLI DKYDLYGQVA MPKHHQQSDV PEIYRLAAKT KGVFINPAFI EPFGLTLIEA GAHGLPTVAT
0601: INGGPVDIHR VLDNGLLVDP HDQQAIADAL LKLVSDRQLW GRCRQNGLNN IHLFSWPEHC KTYLARIASC KQRHPKWQRV EFENSDSDSP SDSLRDINDI
0701: SLNLKLSLDG EKSGSNNGVD TNLDAEDRAA ERKAEVEKAV STLAQKSKPT EKFDSKMPTL KRRKNIFVIS VDCSATSDLL AVVKTVIDAA GRGSSTGFIL
0801: STSMTISETH TALLSGGLKP QDFDAVICSS GSELYFTSSG SEDKTALPYT LDADYHSHIE FRWGGESLRK TLIRWISSVE EKKKTKKGEI LVEDESSSTN
0901: YCLSFKVKDP ALMPPMKELR KLMRNQALRC NAVYCQNGAR LNVIPVLASR SQALRYLLVR WGIDLSNMVV FVGDSGDTDY EGLLGGIHKT VILKGLASDL
1001: REQPGNRSYP MEDVTPLNSP NITEAKECGR DAIKVALEKL GISLLKP
0101: EGKNAKREAK REREREKARR EVTAEMSEDF SEGEKADLPG EIPTPSDNNT KGRMSRISSV DVFENWFAQH KEKKLYIVLI SLHGLIRGEN MELGRDSDTG
0201: GQVKYVVELA RALGSMPGVY RVDLLTRQVT APDVDSSYSE PSEMLNPIDT DIEQENGESS GAYIIRIPFG PKDKYVPKEL LWPHIPEFVD RALSHIMQIS
0301: KVLGEQIGGG QQVWPVSIHG HYADAGDSTA LLSGALNVPM VFTGHSLGRD KLEQLLKQGR PKEEINSNYK IWRRIEAEEL CLDASEIVIT STRQEVDEQW
0401: RLYDGFDPVL ERKLRARMKR GVSCLGRFMP RMVVIPPGME FHHIVPHDVD ADGDDENPQT ADPPIWSEIM RFFSNPRKPM ILALARPDPK KNLVTLVKAF
0501: GECRPLRELA NLTLIMGNRN DIDELSSTNS SVLLSILKLI DKYDLYGQVA MPKHHQQSDV PEIYRLAAKT KGVFINPAFI EPFGLTLIEA GAHGLPTVAT
0601: INGGPVDIHR VLDNGLLVDP HDQQAIADAL LKLVSDRQLW GRCRQNGLNN IHLFSWPEHC KTYLARIASC KQRHPKWQRV EFENSDSDSP SDSLRDINDI
0701: SLNLKLSLDG EKSGSNNGVD TNLDAEDRAA ERKAEVEKAV STLAQKSKPT EKFDSKMPTL KRRKNIFVIS VDCSATSDLL AVVKTVIDAA GRGSSTGFIL
0801: STSMTISETH TALLSGGLKP QDFDAVICSS GSELYFTSSG SEDKTALPYT LDADYHSHIE FRWGGESLRK TLIRWISSVE EKKKTKKGEI LVEDESSSTN
0901: YCLSFKVKDP ALMPPMKELR KLMRNQALRC NAVYCQNGAR LNVIPVLASR SQALRYLLVR WGIDLSNMVV FVGDSGDTDY EGLLGGIHKT VILKGLASDL
1001: REQPGNRSYP MEDVTPLNSP NITEAKECGR DAIKVALEKL GISLLKP
Arabidopsis Description
SPS2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.