Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0089g00410.t01 | Wine grape | cytosol | 94.39 | 18.07 |
| VIT_05s0029g01140.t01 | Wine grape | cytosol | 33.16 | 6.09 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 30.1 | 5.58 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 27.55 | 5.13 |
| VIT_07s0005g00750.t01 | Wine grape | cytosol | 3.57 | 0.86 |
| VIT_05s0077g01930.t01 | Wine grape | cytosol | 3.06 | 0.74 |
| VIT_11s0016g00470.t01 | Wine grape | cytosol | 2.55 | 0.61 |
| VIT_17s0053g00700.t01 | Wine grape | cytosol | 2.04 | 0.44 |
| VIT_04s0079g00230.t01 | Wine grape | cytosol | 1.02 | 0.24 |
| CDX73329 | Canola | cytosol | 0.0 | 0.0 |
| VIT_00s1562g00010.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_10s0071g00070.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_10s0071g00080.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_12s0057g00130.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_18s0075g00350.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_18s0075g00340 | EMBL:FN594970 | EnsemblPlants:VIT_18s0075g00340.t01 | EnsemblPlantsGene:VIT_18s0075g00340 | InterPro:SPP_N | PFAM:PF05116 |
| ProteinID:CBI18275 | ProteinID:CBI18275.3 | SEG:seg | UniParc:UPI00015CB36A | UniProt:D7SRJ4 | MapMan:35.1 |
Description
No Description!
Coordinates
chr18:-:21736473..21737276
Molecular Weight (calculated)
21913.1 Da
IEP (calculated)
7.361
GRAVY (calculated)
-0.334
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSNGNSSV SYHSGRRQGL FVIAADCYDS NGDCTERLPT IIKNVMKSTS SGLGRIGFVL LTGLSLQEIL EKLRCCQVNL EEIDALVCNS GIEIYYPWRD
101: LIADLEYEAH VENRWPGESV RSVVTRLAQG EGGAEDDIVE YAGVCSTRCY SYGVKPGAKT RRIDDLRQRM WMRGFRCNLV YTHATSRLNV HQGPKH
101: LIADLEYEAH VENRWPGESV RSVVTRLAQG EGGAEDDIVE YAGVCSTRCY SYGVKPGAKT RRIDDLRQRM WMRGFRCNLV YTHATSRLNV HQGPKH
001: MHGLVRGENM ELGRDSDTGG QVKYVVELAR ALANTEGVHR VDLLTRQISS PEVDYSYGEP VEMLSCPPEG SDSCGSYIIR IPCGSRDKYI PKESLWPHIP
101: EFVDGALNHI VSIARSLGEQ VNGGKPIWPY VIHGHYADAG EVAAHLAGAL NVPMVLTGHS LGRNKFEQLL QQGRITREDI DRTYKIMRRI EAEEQSLDAA
201: EMVVTSTRQE IDAQWGLYDG FDIKLERKLR VRRRRGVSCL GRYMPRMVVI PPGMDFSYVL TQDSQEPDGD LKSLIGPDRN QIKKPVPPIW SEIMRFFSNP
301: HKPTILALSR PDHKKNVTTL VKAFGECQPL RELANLVLIL GNRDDIEEMP NSSSVVLMNV LKLIDQYDLY GQVAYPKHHK QSEVPDIYRL AAKTKGVFIN
401: PALVEPFGLT LIEAAAYGLP IVATRNGGPV DIVKALNNGL LVDPHDQQAI SDALLKLVAN KHLWAECRKN GLKNIHRFSW PEHCRNYLSH VEHCRNRHPT
501: SSLDIMKVPE ELTSDSLRDV DDISLRFSTE GDFTLNGELD AGTRQKKLVD AISQMNSMKG CSAAIYSPGR RQMLFVVAVD SYDDNGNIKA NLNEIIKNMI
601: KAADLTSGKG KIGFVLASGS SLQEVVDITQ KNLINLEDFD AIVCNSGSEI YYPWRDMMVD ADYETHVEYK WPGESIRSVI LRLICTEPAA EDDITEYASS
701: CSTRCYAISV KQGVKTRRVD DLRQRLRMRG LRCNIVYTHA ATRLNVIPLC ASRIQALRYL SIRWGIDMSK TVFFLGEKGD TDYEDLLGGL HKTIILKGVV
801: GSDSEKLLRS EENFKREDAV PQESPNISYV KENGGSQEIM STLEAYGIK
101: EFVDGALNHI VSIARSLGEQ VNGGKPIWPY VIHGHYADAG EVAAHLAGAL NVPMVLTGHS LGRNKFEQLL QQGRITREDI DRTYKIMRRI EAEEQSLDAA
201: EMVVTSTRQE IDAQWGLYDG FDIKLERKLR VRRRRGVSCL GRYMPRMVVI PPGMDFSYVL TQDSQEPDGD LKSLIGPDRN QIKKPVPPIW SEIMRFFSNP
301: HKPTILALSR PDHKKNVTTL VKAFGECQPL RELANLVLIL GNRDDIEEMP NSSSVVLMNV LKLIDQYDLY GQVAYPKHHK QSEVPDIYRL AAKTKGVFIN
401: PALVEPFGLT LIEAAAYGLP IVATRNGGPV DIVKALNNGL LVDPHDQQAI SDALLKLVAN KHLWAECRKN GLKNIHRFSW PEHCRNYLSH VEHCRNRHPT
501: SSLDIMKVPE ELTSDSLRDV DDISLRFSTE GDFTLNGELD AGTRQKKLVD AISQMNSMKG CSAAIYSPGR RQMLFVVAVD SYDDNGNIKA NLNEIIKNMI
601: KAADLTSGKG KIGFVLASGS SLQEVVDITQ KNLINLEDFD AIVCNSGSEI YYPWRDMMVD ADYETHVEYK WPGESIRSVI LRLICTEPAA EDDITEYASS
701: CSTRCYAISV KQGVKTRRVD DLRQRLRMRG LRCNIVYTHA ATRLNVIPLC ASRIQALRYL SIRWGIDMSK TVFFLGEKGD TDYEDLLGGL HKTIILKGVV
801: GSDSEKLLRS EENFKREDAV PQESPNISYV KENGGSQEIM STLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.