Factsheet for VIT_05s0077g01930.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0057g00130.t01	Wine grape	cytosol	20.54	93.79
VIT_00s1562g00010.t01	Wine grape	cytosol	20.42	93.22
VIT_10s0071g00070.t01	Wine grape	cytosol	8.91	88.89
CDX85398	Canola	cytosol	82.55	82.65
AT5G49190.1	Thale cress	cytosol	82.43	82.53
Bra037432.1-P	Field mustard	cytosol	82.18	82.28
CDX86250	Canola	cytosol	80.2	82.23
GSMUA_Achr8P22470_001	Banana	cytosol	82.3	82.2
VIT_07s0005g00750.t01	Wine grape	cytosol	82.05	81.75
KRH12090	Soybean	endoplasmic reticulum	80.69	81.3
GSMUA_Achr3P08190_001	Banana	cytosol	62.13	80.45
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	79.7	79.6
EER92301	Sorghum	cytosol	79.7	79.6
TraesCS4D01G169800.1	Wheat	cytosol	79.58	79.48
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	79.21	79.11
HORVU4Hr1G049500.3	Barley	cytosol	79.21	79.01
TraesCS4B01G167500.1	Wheat	cytosol	78.84	78.74
GSMUA_Achr3P08200_001	Banana	mitochondrion	17.45	77.9
Zm00001d029091_P003	Maize	cytosol	79.33	77.79
Zm00001d029087_P002	Maize	cytosol	79.33	75.5
VIT_11s0016g00470.t01	Wine grape	cytosol	69.93	69.33
Zm00001d010801_P001	Maize	cytosol	20.54	67.76
VIT_10s0071g00080.t01	Wine grape	cytosol	6.31	66.23
VIT_04s0079g00230.t01	Wine grape	cytosol	55.57	53.01
VIT_17s0053g00700.t01	Wine grape	cytosol	55.2	49.23
VIT_18s0075g00350.t01	Wine grape	cytosol	5.45	30.99
VIT_04s0008g05730.t01	Wine grape	cytosol	21.66	16.54
VIT_11s0118g00200.t01	Wine grape	cytosol	21.53	16.54
VIT_05s0029g01140.t01	Wine grape	cytosol	21.66	16.4
VIT_18s0089g00410.t01	Wine grape	cytosol	19.8	15.62
VIT_18s0075g00340.t01	Wine grape	plastid	0.74	3.06

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	EntrezGene:100243135	wikigene:100243135	MapMan:3.1.4.2	Gene3D:3.10.450.330
Gene3D:3.40.50.2000	ProteinID:CBI22965	ProteinID:CBI22965.3	UniProt:D7SYA8	EMBL:FN595246	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	EntrezGene:LOC100243135	wikigene:LOC100243135
PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509	SUPFAM:SSF53756	InterPro:Sucrose_synth
InterPro:Sucrose_synthase_pln/cyn	TIGR:TC53526	TIGRFAMs:TIGR02470	UniParc:UPI00015CB93A	ArrayExpress:VIT_05s0077g01930	EnsemblPlantsGene:VIT_05s0077g01930
EnsemblPlants:VIT_05s0077g01930.t01	unigene:Vvi.8045	RefSeq:XP_002271530	RefSeq:XP_002271530.1	:	:

Description

Sucrose synthase [Source:UniProtKB/TrEMBL;Acc:D7SYA8]

Coordinates

chr5:+:1507786..1515524

Molecular Weight (calculated)

92561.0 Da

IEP (calculated)

6.329

GRAVY (calculated)

-0.290

Length

808 amino acids

Sequence
(BLAST)

001: MPHRYDGQSM RERFQETLSA HRNELVSLFT GYVAQGKGIL QPHHMIDELD KVVGKDEGMQ KLRDSPFSKV LKSAQEAIVL PPFVAIAIRP RPGVWEYIRV
101: NVYELNVDQL SVSEYLQFKE ELVDGQIKGN YVLELDFEPF NATFPRPTRS SSIGNGVQFL NRHLSSIMFR NKESLEPLLD FLRAHKHDGH VMMLNDRIQN
201: ISRLQSALAR AEEYLSKLPP LTPYSEFEFE LQGMGFEKGW GDTAQRVSEM VHLLLEILQA PDPSTLETFL GRIPMVFNVV IVSPHGYFGQ ANVLGLPDTG
301: GQIVYILDQV RALENEMLLR IQKQGLDVIP KILIVTRLIP DAKGTTCNQR LERISGTEHT HILRVPFRTE NGILRKWISR FDVWPYLETF AEDASNEIAA
401: ELQGVPDLII GNYSDGNLVA SLLSYKMGIT QCNIAHALEK TKYPESDIYW RKFEDKYHFS SQFTADLIAM NNADFIITST YQEIAGSKNH VGQYESHTAF
501: TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFSYSEKERR LTALHDSIES LLYDSEQNDD HIGMLSDRSK PIIFSMARLD RVKNITGLVE CFGKSSKLRE
601: LVNLVVVAGY IDVTKSRDRE ETKEIEKMHD LIKKYNLHGQ FRWIPAQMNR ARNGELYRYI ADTKGAFVQP AFYEAFGLTV VEAMTCGLPT FATCHGGPAE
701: IIEDGLSGFH IDPYHPDQVA LRLADFFERC QKDPSYWDEI SNGGLKRIYE RYTWKIYTER LLTLAGVYGF WKHVSKLERR ETRRYLEMFY ILKLKDLATS
801: IPLAVDEH

Best Arabidopsis Sequence Match ( AT5G49190.1 )
(BLAST)

001: MPTGRFETMR EWVYDAISAQ RNELLSLFSR YVAQGKGILQ SHQLIDEFLK TVKVDGTLED LNKSPFMKVL QSAEEAIVLP PFVALAIRPR PGVREYVRVN
101: VYELSVDHLT VSEYLRFKEE LVNGHANGDY LLELDFEPFN ATLPRPTRSS SIGNGVQFLN RHLSSIMFRN KESMEPLLEF LRTHKHDGRP MMLNDRIQNI
201: PILQGALARA EEFLSKLPLA TPYSEFEFEL QGMGFERGWG DTAQKVSEMV HLLLDILQAP DPSVLETFLG RIPMVFNVVI LSPHGYFGQA NVLGLPDTGG
301: QVVYILDQVR ALENEMLLRI QKQGLEVIPK ILIVTRLLPE AKGTTCNQRL ERVSGTEHAH ILRIPFRTEK GILRKWISRF DVWPYLETFA EDASNEISAE
401: LQGVPNLIIG NYSDGNLVAS LLASKLGVIQ CNIAHALEKT KYPESDIYWR NHEDKYHFSS QFTADLIAMN NADFIITSTY QEIAGSKNNV GQYESHTAFT
501: MPGLYRVVHG IDVFDPKFNI VSPGADMTIY FPYSDKERRL TALHESIEEL LFSAEQNDEH VGLLSDQSKP IIFSMARLDR VKNLTGLVEC YAKNSKLREL
601: ANLVIVGGYI DENQSRDREE MAEIQKMHSL IEQYDLHGEF RWIAAQMNRA RNGELYRYIA DTKGVFVQPA FYEAFGLTVV ESMTCALPTF ATCHGGPAEI
701: IENGVSGFHI DPYHPDQVAA TLVSFFETCN TNPNHWVKIS EGGLKRIYER YTWKKYSERL LTLAGVYAFW KHVSKLERRE TRRYLEMFYS LKFRDLANSI
801: PLATDEN

Arabidopsis Description

SUS2Sucrose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q00917]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.