Factsheet for Zm00001d010801_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010801_P001
Zm00001d029087_P002
Zm00001d029091_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02280.1	Zm00001d010801_P001	AT4G02280.1	21798944
AT4G02280.1	Zm00001d029087_P002	AT4G02280.1	21798944
AT4G02280.1	Zm00001d029091_P003	AT4G02280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0071g00070.t01	Wine grape	cytosol	17.96	54.32
VIT_12s0057g00130.t01	Wine grape	cytosol	35.92	49.72
VIT_00s1562g00010.t01	Wine grape	cytosol	35.51	49.15
VIT_10s0071g00080.t01	Wine grape	cytosol	11.02	35.06
GSMUA_Achr3P08190_001	Banana	cytosol	65.31	25.64
Zm00001d029091_P003	Maize	cytosol	77.14	22.94
HORVU4Hr1G049500.3	Barley	cytosol	74.69	22.59
TraesCS4D01G169800.1	Wheat	cytosol	74.29	22.5
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	74.29	22.5
Zm00001d029087_P002	Maize	cytosol	77.14	22.26
TraesCS4B01G167500.1	Wheat	cytosol	73.47	22.25
GSMUA_Achr8P22470_001	Banana	cytosol	68.16	20.64
VIT_05s0077g01930.t01	Wine grape	cytosol	67.76	20.54
VIT_07s0005g00750.t01	Wine grape	cytosol	67.76	20.47
KRH68215	Soybean	cytosol, endoplasmic reticulum, nucleus	67.35	20.32
PGSC0003DMT400017087	Potato	cytosol	66.94	20.22
Solyc09g098590.2.1	Tomato	cytosol	66.94	20.2
KRG96468	Soybean	cytosol, endoplasmic reticulum, nucleus	66.53	20.07
KRH12090	Soybean	endoplasmic reticulum	64.9	19.83
CDY52781	Canola	mitochondrion	64.9	19.61
CDY22042	Canola	cytosol, mitochondrion	64.08	19.36
Bra036282.1-P	Field mustard	cytosol, mitochondrion	64.08	19.36
AT5G49190.1	Thale cress	cytosol	62.86	19.08
AT4G02280.1	Thale cress	mitochondrion	62.45	18.91
CDX85398	Canola	cytosol	61.22	18.59
Bra037432.1-P	Field mustard	cytosol	61.22	18.59
Zm00001d047253_P003	Maize	cytosol	59.59	17.89
CDX86250	Canola	cytosol	56.73	17.64
Zm00001d045042_P014	Maize	cytosol, mitochondrion	58.78	17.52
Zm00001d051837_P002	Maize	cytosol	52.24	15.04
CDX87785	Canola	cytosol	7.35	11.18
CDY46981	Canola	cytosol, nucleus, plastid	8.16	5.83
Zm00001d015570_P002	Maize	cytosol	19.18	4.88
Zm00001d042353_P003	Maize	nucleus	20.41	4.63
Zm00001d012036_P001	Maize	nucleus	20.0	4.59
Zm00001d014119_P001	Maize	cytosol	2.86	4.58
Zm00001d048979_P001	Maize	cytosol	18.37	4.41
Zm00001d036749_P001	Maize	cytosol	17.14	4.31
Zm00001d050125_P002	Maize	nucleus	18.37	4.25
Zm00001d046595_P002	Maize	cytosol	15.92	3.99
Zm00001d050151_P001	Maize	cytosol	1.63	2.92
GSMUA_Achr3P08200_001	Banana	mitochondrion	2.04	2.76
Zm00001d016399_P002	Maize	extracellular	1.22	1.91

Protein Annotations

MapMan:3.1.4.2	Gene3D:3.40.50.2000	UniProt:A0A1D6FU36	ProteinID:AQK94988.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157
GO:GO:0016740	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509	SUPFAM:SSF53756	InterPro:Sucrose_synth
UniParc:UPI000844128F	EnsemblPlantsGene:Zm00001d010801	EnsemblPlants:Zm00001d010801_P001	EnsemblPlants:Zm00001d010801_T001	:	:

Description

Sucrose synthase 3

Coordinates

chr8:-:128221197..128224007

Molecular Weight (calculated)

27902.3 Da

IEP (calculated)

4.946

GRAVY (calculated)

-0.055

Length

245 amino acids

Sequence
(BLAST)

001: MLCGYFYVEA EEQPEISEAY EVTTFPYFVF CKDVAGEIAA ELQGTPDFII GNYSDGNLVA SLLSYKMGIT QCNIAHALEK TKYPDSDIFW KNFDEKYHFS
101: CQFTADIIAM NNADFDHHQH IPRNCWKVFI LFPSSKILLD SMIVITAITL PGLYRVVHGI DVFDPKFNIV SPGADMSIYF PHTEKAKRLT SLHGSIENLI
201: YDPEQNDEHI GHLDDWSKPI LFSMARLDRV KNITGWSKLL LSALS

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.