Factsheet for Solyc09g098590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc09g098590.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02280.1	Solyc09g098590.2.1	AT4G02280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017087	Potato	cytosol	97.66	97.78
VIT_07s0005g00750.t01	Wine grape	cytosol	82.02	82.12
KRH68215	Soybean	cytosol, endoplasmic reticulum, nucleus	80.3	80.3
KRG96468	Soybean	cytosol, endoplasmic reticulum, nucleus	79.68	79.68
GSMUA_Achr8P22470_001	Banana	cytosol	79.06	79.36
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	78.94	79.23
EER92301	Sorghum	cytosol	78.57	78.86
TraesCS4D01G169800.1	Wheat	cytosol	78.2	78.49
GSMUA_Achr3P08200_001	Banana	mitochondrion	17.49	78.45
Bra036282.1-P	Field mustard	cytosol, mitochondrion	78.08	78.18
CDY22042	Canola	cytosol, mitochondrion	78.08	78.18
CDY52781	Canola	mitochondrion	77.83	77.93
HORVU4Hr1G049500.3	Barley	cytosol	77.71	77.9
AT4G02280.1	Thale cress	mitochondrion	77.59	77.87
GSMUA_Achr3P08190_001	Banana	cytosol	59.73	77.72
Zm00001d029091_P003	Maize	cytosol	78.82	77.67
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	77.09	77.38
TraesCS4B01G167500.1	Wheat	cytosol	76.97	77.26
Zm00001d029087_P002	Maize	cytosol	78.69	75.27
Solyc07g042550.2.1	Tomato	extracellular	68.23	68.82
Solyc12g009300.1.1	Tomato	nucleus	68.23	68.82
Zm00001d010801_P001	Maize	cytosol	20.2	66.94
Solyc07g042520.2.1	Tomato	cytosol, extracellular	62.07	62.76
Solyc02g081300.2.1	Tomato	cytosol, nucleus	56.77	52.15
CDX87785	Canola	cytosol	10.22	51.55
Solyc03g098290.2.1	Tomato	cytosol, nucleus	55.79	50.84
CDY46981	Canola	cytosol, nucleus, plastid	14.9	35.28
Solyc08g042000.2.1	Tomato	nucleus	20.2	15.69
Solyc07g007790.2.1	Tomato	cytosol	19.83	15.28
Solyc09g092130.2.1	Tomato	nucleus, unclear	19.83	15.13
Solyc11g045110.1.1	Tomato	cytosol	18.23	14.8

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	ProteinID:ADM47609.1
ncoils:Coil	UniProt:E0Z1D1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509	SUPFAM:SSF53756
EnsemblPlantsGene:Solyc09g098590.2	EnsemblPlants:Solyc09g098590.2.1	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0001E40EB2

Description

Sucrose synthase 2 [Source:Projected from Arabidopsis thaliana (AT5G49190) UniProtKB/Swiss-Prot;Acc:Q00917]

Coordinates

chr9:+:72380198..72385562

Molecular Weight (calculated)

92926.5 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.292

Length

812 amino acids

Sequence
(BLAST)

001: MSNPKLSRIP SMRERVEDTL SAHRNQLVAL LSRYVAQGKG ILQPHHLIDE LNNAVCDDTA CEKLKEGPFC EILKSTQEAI VLPPFVAIAV RPRPGVWEYV
101: RVNVYDLSVE QLTVPEYLRF KEELVDGEDH NHLFVLELDF EPFNASVPRP SRSSSIGNGV QFLNRHLSSN MFRSNESLDP LLDFLRGHNH KGNVLMLNER
201: IQRISRLESS LNKADDYLSK LPPDTPYTDF EYALQEMGFE KGWGDTANRV LETMHLLSDI LQAPDPSTLE TFLGRLPMVF NVVILSPHGY FGQANVLGLP
301: DTGGQVVYIL DQVRALEAEM LLRIKQQGLN FKPRILVVTR LIPDAKGTTC NQRLERISGT EYSHILRVPF RTENGILHKW ISRFDVWPYL EKFTEDVAGE
401: MSAELQGVPD LIIGNYSDGN LVASLLAYKM GITQCTIAHA LEKTKYPDSD IYWKKFEEKY HFSCQFTADL LSMNHSDFII TSTYQEIAGT KNTVGQYESH
501: TAFTLPGLYR VVHGIDVFDP KFNIVSPGAD MTIYFPYFDK EKRLTSLHPS IEKLLFDPEQ NEVHIGSLND QSKPIIFSMA RLDRVKNITG LVECYAKNAT
601: LRELANLVVV AGYNDVKKSN DREEIAEIEK MHALMKEHNL DGQFRWISAQ MNRARNGELY RYIADKRGIF VQPAYYEAFG LTVVEAMTCG LPTFATCHGG
701: PMEIIQDGVS GYHIDPYHPN KAAELMVEFF QRCEQNPTHW ENISASGLQR ILDRYTWKIY SERLMTLAGV YGFWKLVSKL ERRETRRYLE MFYILKFREL
801: VKSVPLAVDE KQ

Best Arabidopsis Sequence Match ( AT4G02280.1 )
(BLAST)

001: MANPKLTRVL STRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESVIGDDET KKSLSDGPFG EILKSAMEAI VVPPFVALAV RPRPGVWEYV
101: RVNVFELSVE QLTVSEYLRF KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI
201: QSISRLQIQL SKAEDHISKL SQETPFSEFE YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVPMVFN VVILSPHGYF GQANVLGLPD
301: TGGQVVYILD QVRALETEML LRIKRQGLDI SPSILIVTRL IPDAKGTTCN QRLERVSGTE HTHILRVPFR SEKGILRKWI SRFDVWPYLE NYAQDAASEI
401: VGELQGVPDF IIGNYSDGNL VASLMAHRMG VTQCTIAHAL EKTKYPDSDI YWKDFDNKYH FSCQFTADLI AMNNADFIIT STYQEIAGTK NTVGQYESHG
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYSEET RRLTALHGSI EEMLYSPDQT DEHVGTLSDR SKPILFSMAR LDKVKNISGL VEMYSKNTKL
601: RELVNLVVIA GNIDVNKSKD REEIVEIEKM HNLMKNYKLD GQFRWITAQT NRARNGELYR YIADTRGAFA QPAFYEAFGL TVVEAMTCGL PTFATCHGGP
701: AEIIEHGLSG FHIDPYHPEQ AGNIMADFFE RCKEDPNHWK KVSDAGLQRI YERYTWKIYS ERLMTLAGVY GFWKYVSKLE RRETRRYLEM FYILKFRDLV
801: KTVPSTADD

Arabidopsis Description

SUS3Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6L8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.