Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036282.1-P | Field mustard | cytosol, mitochondrion | 94.07 | 93.83 |
| CDY22042 | Canola | cytosol, mitochondrion | 93.94 | 93.71 |
| CDY52781 | Canola | mitochondrion | 93.82 | 93.59 |
| VIT_07s0005g00750.t01 | Wine grape | cytosol | 82.32 | 82.12 |
| KRG96468 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.2 | 81.9 |
| KRH68215 | Soybean | cytosol, endoplasmic reticulum, nucleus | 81.95 | 81.65 |
| GSMUA_Achr8P22470_001 | Banana | cytosol | 80.35 | 80.35 |
| EER92301 | Sorghum | cytosol | 79.48 | 79.48 |
| Os03t0340500-01 | Rice | cytosol, plasma membrane, plastid | 79.11 | 79.11 |
| TraesCS4D01G169800.1 | Wheat | cytosol | 78.37 | 78.37 |
| PGSC0003DMT400017087 | Potato | cytosol | 78.37 | 78.18 |
| Zm00001d029091_P003 | Maize | cytosol | 79.48 | 78.03 |
| HORVU4Hr1G049500.3 | Barley | cytosol | 77.87 | 77.78 |
| TraesCS4A01G140000.1 | Wheat | cytosol, golgi, unclear | 77.75 | 77.75 |
| Solyc09g098590.2.1 | Tomato | cytosol | 77.87 | 77.59 |
| TraesCS4B01G167500.1 | Wheat | cytosol | 77.38 | 77.38 |
| GSMUA_Achr3P08190_001 | Banana | cytosol | 59.33 | 76.92 |
| GSMUA_Achr3P08200_001 | Banana | mitochondrion | 17.18 | 76.8 |
| Zm00001d029087_P002 | Maize | cytosol | 79.48 | 75.74 |
| AT5G49190.1 | Thale cress | cytosol | 74.41 | 74.6 |
| AT3G43190.1 | Thale cress | cytosol | 68.23 | 68.32 |
| AT5G20830.1 | Thale cress | cytosol | 67.61 | 67.7 |
| Zm00001d010801_P001 | Maize | cytosol | 18.91 | 62.45 |
| AT5G37180.1 | Thale cress | cytosol | 54.88 | 53.05 |
| AT1G73370.1 | Thale cress | cytosol | 55.75 | 47.88 |
| AT5G20280.1 | Thale cress | cytosol | 20.15 | 15.63 |
| AT1G04920.1 | Thale cress | cytosol | 20.4 | 15.54 |
| AT4G10120.3 | Thale cress | cytosol | 19.9 | 15.33 |
| AT5G11110.1 | Thale cress | cytosol | 19.78 | 15.28 |
Protein Annotations
| KEGG:00500+2.4.1.13 | Gene3D:1.20.120.1230 | MapMan:3.1.4.2 | Gene3D:3.10.450.330 | Gene3D:3.40.50.2000 | EntrezGene:828081 |
| UniProt:A0A178V0Z2 | ProteinID:AAC28175.1 | ProteinID:AEE82150.1 | ArrayExpress:AT4G02280 | EnsemblPlantsGene:AT4G02280 | RefSeq:AT4G02280 |
| TAIR:AT4G02280 | RefSeq:AT4G02280-TAIR-G | EnsemblPlants:AT4G02280.1 | TAIR:AT4G02280.1 | EMBL:AY051001 | EMBL:AY056784 |
| EMBL:AY142511 | Unigene:At.3877 | ProteinID:CAB80721.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005982 | GO:GO:0005985 | GO:GO:0006950 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010431 | GO:GO:0010555 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_1 |
| EMBL:KJ138769 | RefSeq:NP_192137.1 | ProteinID:OAO99327.1 | PFAM:PF00534 | PFAM:PF00862 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000035 | PO:PO:0000056 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF509 | UniProt:Q9M111 | SUPFAM:SSF53756 | Symbol:SUS3 | InterPro:Sucrose_synth |
| InterPro:Sucrose_synthase_pln/cyn | TIGRFAMs:TIGR02470 | UniParc:UPI00000488E3 | UniProt:W8Q6L8 | : | : |
Description
SUS3Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6L8]
Coordinates
chr4:+:994726..998991
Molecular Weight (calculated)
92007.3 Da
IEP (calculated)
6.198
GRAVY (calculated)
-0.276
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKLTRVL STRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESVIGDDET KKSLSDGPFG EILKSAMEAI VVPPFVALAV RPRPGVWEYV
101: RVNVFELSVE QLTVSEYLRF KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI
201: QSISRLQIQL SKAEDHISKL SQETPFSEFE YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVPMVFN VVILSPHGYF GQANVLGLPD
301: TGGQVVYILD QVRALETEML LRIKRQGLDI SPSILIVTRL IPDAKGTTCN QRLERVSGTE HTHILRVPFR SEKGILRKWI SRFDVWPYLE NYAQDAASEI
401: VGELQGVPDF IIGNYSDGNL VASLMAHRMG VTQCTIAHAL EKTKYPDSDI YWKDFDNKYH FSCQFTADLI AMNNADFIIT STYQEIAGTK NTVGQYESHG
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYSEET RRLTALHGSI EEMLYSPDQT DEHVGTLSDR SKPILFSMAR LDKVKNISGL VEMYSKNTKL
601: RELVNLVVIA GNIDVNKSKD REEIVEIEKM HNLMKNYKLD GQFRWITAQT NRARNGELYR YIADTRGAFA QPAFYEAFGL TVVEAMTCGL PTFATCHGGP
701: AEIIEHGLSG FHIDPYHPEQ AGNIMADFFE RCKEDPNHWK KVSDAGLQRI YERYTWKIYS ERLMTLAGVY GFWKYVSKLE RRETRRYLEM FYILKFRDLV
801: KTVPSTADD
101: RVNVFELSVE QLTVSEYLRF KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI
201: QSISRLQIQL SKAEDHISKL SQETPFSEFE YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVPMVFN VVILSPHGYF GQANVLGLPD
301: TGGQVVYILD QVRALETEML LRIKRQGLDI SPSILIVTRL IPDAKGTTCN QRLERVSGTE HTHILRVPFR SEKGILRKWI SRFDVWPYLE NYAQDAASEI
401: VGELQGVPDF IIGNYSDGNL VASLMAHRMG VTQCTIAHAL EKTKYPDSDI YWKDFDNKYH FSCQFTADLI AMNNADFIIT STYQEIAGTK NTVGQYESHG
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYSEET RRLTALHGSI EEMLYSPDQT DEHVGTLSDR SKPILFSMAR LDKVKNISGL VEMYSKNTKL
601: RELVNLVVIA GNIDVNKSKD REEIVEIEKM HNLMKNYKLD GQFRWITAQT NRARNGELYR YIADTRGAFA QPAFYEAFGL TVVEAMTCGL PTFATCHGGP
701: AEIIEHGLSG FHIDPYHPEQ AGNIMADFFE RCKEDPNHWK KVSDAGLQRI YERYTWKIYS ERLMTLAGVY GFWKYVSKLE RRETRRYLEM FYILKFRDLV
801: KTVPSTADD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.