Factsheet for HORVU4Hr1G049500.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G049500.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02280.1	HORVU4Hr1G049500.3	AT4G02280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G169800.1	Wheat	cytosol	97.41	97.53
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	96.67	96.79
TraesCS4B01G167500.1	Wheat	cytosol	96.42	96.54
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	91.73	91.84
EER92301	Sorghum	cytosol	91.36	91.47
VIT_12s0057g00130.t01	Wine grape	cytosol	18.15	83.05
VIT_00s1562g00010.t01	Wine grape	cytosol	18.02	82.49
GSMUA_Achr8P22470_001	Banana	cytosol	81.11	81.21
GSMUA_Achr3P08200_001	Banana	mitochondrion	18.02	80.66
VIT_07s0005g00750.t01	Wine grape	cytosol	80.62	80.52
GSMUA_Achr3P08190_001	Banana	cytosol	61.6	79.97
VIT_05s0077g01930.t01	Wine grape	cytosol	79.01	79.21
VIT_10s0071g00070.t01	Wine grape	cytosol	7.9	79.01
KRG96468	Soybean	cytosol, endoplasmic reticulum, nucleus	78.77	78.57
KRH68215	Soybean	cytosol, endoplasmic reticulum, nucleus	78.52	78.33
Bra036282.1-P	Field mustard	cytosol, mitochondrion	78.15	78.05
CDY22042	Canola	cytosol, mitochondrion	78.02	77.93
AT4G02280.1	Thale cress	mitochondrion	77.78	77.87
CDY52781	Canola	mitochondrion	77.9	77.81
Solyc09g098590.2.1	Tomato	cytosol	77.9	77.71
PGSC0003DMT400017087	Potato	cytosol	77.53	77.44
HORVU0Hr1G019020.1	Barley	cytosol	13.83	75.17
Zm00001d010801_P001	Maize	cytosol	22.59	74.69
KRH12090	Soybean	endoplasmic reticulum	73.58	74.31
CDX85398	Canola	cytosol	73.21	73.48
CDX86250	Canola	cytosol	71.48	73.48
AT5G49190.1	Thale cress	cytosol	73.09	73.36
Bra037432.1-P	Field mustard	cytosol	72.84	73.11
HORVU5Hr1G050660.1	Barley	cytosol	3.58	72.5
HORVU7Hr1G033230.2	Barley	mitochondrion	69.38	69.47
HORVU2Hr1G030870.1	Barley	plasma membrane	68.64	68.14
HORVU7Hr1G007220.8	Barley	cytosol	68.27	67.85
VIT_10s0071g00080.t01	Wine grape	cytosol	6.05	63.64
HORVU7Hr1G120520.1	Barley	cytosol	57.53	54.0
HORVU6Hr1G094880.6	Barley	cytosol	55.56	52.26
CDX87785	Canola	cytosol	10.37	52.17
CDY46981	Canola	cytosol, nucleus, plastid	14.94	35.28
HORVU3Hr1G093830.2	Barley	cytosol, nucleus	20.25	16.52
HORVU7Hr1G115590.10	Barley	nucleus	19.26	15.62
HORVU4Hr1G015570.3	Barley	cytosol	19.88	15.25
HORVU3Hr1G002280.1	Barley	plastid	20.86	14.96
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	18.77	14.73

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	UniProt:A0A287NYY7
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1
EnsemblPlantsGene:HORVU4Hr1G049500	EnsemblPlants:HORVU4Hr1G049500.3	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000B46F3C2	:

Description

Sucrose synthase [Source:UniProtKB/TrEMBL;Acc:A0A287NYY7]

Coordinates

chrchr4H:+:400917157..400961760

Molecular Weight (calculated)

92287.9 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.258

Length

810 amino acids

Sequence
(BLAST)

001: MAAPKLDRTP SIRERVEDTL HAHRNELVAL LSKYVSKGKG ILQPHRILDT LDEVQVSGGS ALAEGPFLDV LRSSQQEAIV LPPFVAIAVR PRPGVWEYVR
101: VNVHELNVEQ LSVSEYLRFK EELVDGQHNN PYVLELDFEP FTALIPRPSR SSSIGNGVQF LNRHLSSILF RNRDCLEPLL DFLREHRHKG HVMMLNDRIQ
201: SVGRLQSVLT KAEENLSKLP AETPYSQFAN QFQEWGLEKG WGDTAEHVLE MIHLLLDILQ APDPSTLETF LGRIPMIFNV VIVSPHGYFG QANVLGMPDT
301: GGQIVYILDQ VRALENEMVL RLKKQGLDVT PKILIVTRLI PDSKGTSCNQ RLERISGTQH TYILRVPFRN ENGILRKWIS RFDMWPYLEK FAEDAAGEIS
401: AELQGTPDFI IGNYSDGNLV ASLLSYKMGI TQCNIAHALE KTKYPDSDIY WKKFDEKYHF SCQFTADIIA MNNADFIITS TYQEIAGSKN TVGQYESHTA
501: FTLPGLYRVV HGIDVFDPKF NIVSPGADMS IYFPFTEKAK RLTALHGSIE SLIYDPEQND EHIGHLDDPS KPILFSMARL DRVKNMTGLV KAYSKNAKLR
601: SLVNLVVVAG YNDVKKSKDR EEIAEIEKMH ELIKTYNLFG QFRWISAQTN RVRNGELYRY IADTHGAFVQ PALYEAFGLT VVEAMTCGLP TFATLHGGPA
701: EIIEHGISGF HIDPYHPDQA ATLMADFFGQ CKQDPNHWVK ISDKGLQRIY EKYTWKIYSE RLMTLAGVYG FWKYVSKLER RETRRYLEMF YILKLRELVK
801: SVPLALDETH

Best Arabidopsis Sequence Match ( AT4G02280.1 )
(BLAST)

001: MANPKLTRVL STRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESVIGDDET KKSLSDGPFG EILKSAMEAI VVPPFVALAV RPRPGVWEYV
101: RVNVFELSVE QLTVSEYLRF KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI
201: QSISRLQIQL SKAEDHISKL SQETPFSEFE YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVPMVFN VVILSPHGYF GQANVLGLPD
301: TGGQVVYILD QVRALETEML LRIKRQGLDI SPSILIVTRL IPDAKGTTCN QRLERVSGTE HTHILRVPFR SEKGILRKWI SRFDVWPYLE NYAQDAASEI
401: VGELQGVPDF IIGNYSDGNL VASLMAHRMG VTQCTIAHAL EKTKYPDSDI YWKDFDNKYH FSCQFTADLI AMNNADFIIT STYQEIAGTK NTVGQYESHG
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM TIYFPYSEET RRLTALHGSI EEMLYSPDQT DEHVGTLSDR SKPILFSMAR LDKVKNISGL VEMYSKNTKL
601: RELVNLVVIA GNIDVNKSKD REEIVEIEKM HNLMKNYKLD GQFRWITAQT NRARNGELYR YIADTRGAFA QPAFYEAFGL TVVEAMTCGL PTFATCHGGP
701: AEIIEHGLSG FHIDPYHPEQ AGNIMADFFE RCKEDPNHWK KVSDAGLQRI YERYTWKIYS ERLMTLAGVY GFWKYVSKLE RRETRRYLEM FYILKFRDLV
801: KTVPSTADD

Arabidopsis Description

SUS3Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6L8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.