Factsheet for HORVU2Hr1G030870.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G168200.1	Wheat	golgi, unclear	98.16	96.39
TraesCS2B01G194200.1	Wheat	golgi	98.16	96.39
TraesCS2D01G175600.1	Wheat	golgi, unclear	97.92	96.03
Os07t0616800-01	Rice	cytosol	92.28	92.28
HORVU0Hr1G019020.1	Barley	cytosol	16.67	91.28
HORVU7Hr1G007220.8	Barley	cytosol	89.95	90.06
HORVU5Hr1G050660.1	Barley	cytosol	4.17	85.0
GSMUA_Achr6P10890_001	Banana	unclear	83.46	83.56
GSMUA_Achr2P21870_001	Banana	cytosol	83.09	83.19
GSMUA_Achr3P01900_001	Banana	mitochondrion	82.84	82.84
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	82.72	82.72
HORVU7Hr1G033230.2	Barley	mitochondrion	79.41	80.1
GSMUA_Achr7P19810_001	Banana	mitochondrion	79.9	79.9
KRH19379	Soybean	cytosol	74.02	75.03
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	73.9	74.91
VIT_11s0016g00470.t01	Wine grape	cytosol	74.75	74.85
PGSC0003DMT400007505	Potato	cytosol	73.65	74.66
Solyc12g009300.1.1	Tomato	nucleus	73.53	74.53
CDX88838	Canola	endoplasmic reticulum, golgi	67.4	74.02
KRH12615	Soybean	endoplasmic reticulum	72.79	73.7
AT3G43190.1	Thale cress	cytosol	72.67	73.39
Solyc07g042550.2.1	Tomato	extracellular	72.18	73.17
Bra002332.1-P	Field mustard	cytosol	70.1	72.77
KRH37557	Soybean	endoplasmic reticulum	72.18	72.72
PGSC0003DMT400035262	Potato	cytosol	71.94	72.65
CDY16569	Canola	cytosol	71.57	72.55
CDX92432	Canola	cytosol	71.45	72.42
Bra006578.1-P	Field mustard	cytosol	71.2	72.08
CDX70945	Canola	cytosol	70.96	71.84
AT5G20830.1	Thale cress	cytosol	71.08	71.78
HORVU4Hr1G049500.3	Barley	cytosol	68.14	68.64
Solyc07g042520.2.1	Tomato	cytosol, extracellular	64.58	65.63
PGSC0003DMT400035264	Potato	cytosol	64.22	65.26
HORVU7Hr1G120520.1	Barley	cytosol	55.64	52.61
HORVU6Hr1G094880.6	Barley	cytosol	52.94	50.17
HORVU3Hr1G093830.2	Barley	cytosol, nucleus	19.49	16.01
HORVU4Hr1G015570.3	Barley	cytosol	19.24	14.87
HORVU7Hr1G115590.10	Barley	nucleus	18.14	14.81
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	18.5	14.63
HORVU3Hr1G002280.1	Barley	plastid	19.61	14.16

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	UniProt:A0A287HK37
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	EnsemblPlantsGene:HORVU2Hr1G030870
EnsemblPlants:HORVU2Hr1G030870.1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398	SUPFAM:SSF53756
InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000B464B74	:	:

Description

Sucrose synthase [Source:UniProtKB/TrEMBL;Acc:A0A287HK37]

Coordinates

chrchr2H:-:115321811..115327875

Molecular Weight (calculated)

92592.2 Da

IEP (calculated)

6.599

GRAVY (calculated)

-0.270

Length

816 amino acids

Sequence
(BLAST)

001: MGETAGERAL SRVHSVRERI GDSLSAHTNE LVAVFSRLVN QGKGMLQPHQ ITAEYNAAIP EAEREKLKNT PFEDLLRGAQ EAIVIPPWVA LAIRPRPGVW
101: EYVRVNVSEL GVEELSVPEY LQFKEQLANG STDNNFVLEL DFGPFNASFP RPSLSKSIGN GVQFLNRHLS SKLFHDKESM YPLLNFLRAH NYKGMTMMLN
201: DRIRSLGTLQ GALRKAETHL SGLPADTPYS EFHHRFQELG LEKGWGDCAQ RASETIHLLL DLLEAPDPSS LEKFLGTIPM VFNVVILSPH GYFAQANVLG
301: YPDTGGQVVY ILDQVRAMEN EMLLRIKQQG LDITPKILIV TRMLPDAHGT TCGQRLEKVL GTEHTHILRV PFKTEDGIVR KWISRFEVWP YLEAYTDDVA
401: HEIAGELQAN PDLIIGNYSD GNLVACLLAH KLGVTHCTIA HALEKTKYPN SDLYWKKFED HYHFSCQFTA DLIAMNHADF IITSTFQEIA GNKDTVGQYE
501: SHMAFTMPGL YRVVHGIDVF DPKFNIVSPG ADMSIYFPYT EQQKRLTSLH TEIEELLFSD VENAEHKFVL KDKKKPIIFS MARLDRVKNM TGLVEMYGRN
601: PRLQELVNLV VVCGDHGKVS KDKEEQVEFK KMFDLIEKYN LSGHIRWISA QMNRVRNGEL YRYICDMKGA FVQPAFYEAF GLTVIEAMTC GLPTFATAYG
701: GPAEIIVNGV SGYHIDPYQN DKASALLVDF FGKCQEDPSH WNKISQGGLQ RIEEKYTWKL YSERLMTLSG VYGFWKYVSN LDRRETRRYL EMLYALKYRK
801: MAATVPLAVE GETSGK

Best Arabidopsis Sequence Match ( AT3G43190.1 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.