Factsheet for HORVU6Hr1G094880.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G403800.1	Wheat	cytosol	97.1	96.42
TraesCSU01G082000.1	Wheat	plastid	96.4	95.62
TraesCS4A01G492600.1	Wheat	cytosol	61.79	95.0
TraesCS6B01G466600.1	Wheat	cytosol	95.47	94.7
Os02t0831500-01	Rice	plastid	81.53	82.98
HORVU7Hr1G120520.1	Barley	cytosol	81.18	81.0
KXG31429	Sorghum	cytosol	77.58	77.4
Zm00001d051837_P002	Maize	cytosol	76.19	77.09
PGSC0003DMT400079728	Potato	cytosol	15.21	74.43
GSMUA_Achr9P21240_001	Banana	cytosol	72.47	73.93
GSMUA_Achr3P13980_001	Banana	cytosol	71.43	72.87
KRH72916	Soybean	cytosol	67.36	69.05
KRH17270	Soybean	cytosol	67.13	68.81
HORVU0Hr1G019020.1	Barley	cytosol	11.73	67.79
PGSC0003DMT400043117	Potato	cytosol	65.39	67.02
VIT_04s0079g00230.t01	Wine grape	cytosol	65.27	66.35
KRH30890	Soybean	cytosol	64.81	66.04
VIT_17s0053g00700.t01	Wine grape	cytosol	68.99	65.56
Bra039502.1-P	Field mustard	cytosol	62.37	64.16
Solyc02g081300.2.1	Tomato	cytosol, nucleus	65.85	64.14
CDY71780	Canola	cytosol, extracellular	26.48	64.04
AT5G37180.1	Thale cress	cytosol	62.02	63.8
CDY38565	Canola	cytosol	62.37	63.48
CDY26996	Canola	cytosol	62.14	63.24
Solyc03g098290.2.1	Tomato	cytosol, nucleus	64.92	62.74
KRH38924	Soybean	plastid	65.74	61.45
KRH09470	Soybean	cytosol, plastid	65.62	61.41
CDX96472	Canola	cytosol	62.37	57.43
CDX72985	Canola	cytosol	62.25	57.39
Bra015995.1-P	Field mustard	cytosol	62.6	57.16
Bra003845.1-P	Field mustard	cytosol	62.14	56.91
AT1G73370.1	Thale cress	cytosol	62.25	56.9
CDX68228	Canola	cytosol	61.9	56.7
CDY11107	Canola	cytosol	61.44	56.28
HORVU4Hr1G049500.3	Barley	cytosol	52.26	55.56
HORVU7Hr1G033230.2	Barley	mitochondrion	50.52	53.77
HORVU2Hr1G030870.1	Barley	plasma membrane	50.17	52.94
HORVU7Hr1G007220.8	Barley	cytosol	49.71	52.52
HORVU5Hr1G050660.1	Barley	cytosol	2.09	45.0
HORVU3Hr1G093830.2	Barley	cytosol, nucleus	18.12	15.71
HORVU4Hr1G015570.3	Barley	cytosol	18.35	14.96
HORVU7Hr1G115590.10	Barley	nucleus	17.19	14.81
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	17.54	14.63
HORVU3Hr1G002280.1	Barley	plastid	18.47	14.07

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EMBL:AK366564
UniProt:F2DRP6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1
EnsemblPlantsGene:HORVU6Hr1G094880	EnsemblPlants:HORVU6Hr1G094880.6	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF546
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0002006E79	SEG:seg

Description

Sucrose synthase [Source:UniProtKB/TrEMBL;Acc:F2DRP6]

Coordinates

chrchr6H:-:582423084..582428216

Molecular Weight (calculated)

97829.3 Da

IEP (calculated)

6.586

GRAVY (calculated)

-0.382

Length

861 amino acids

Sequence
(BLAST)

001: MASSSSMPLR RSDSVADMMP EALRQRRYQM KRCFQSYVSK GRRLMKNQQL MEELETSEGD DKVEKARLAE GFLGYVICST QEAVVLPPLV AFAVRTNPGV
101: WEFIRVHSGD LSVEQITPAD YLKCKETLYD EKWARDDNSL EVDFGALDLS TPHLALPSSI GNGMQFISRF MSSKLSGKPE SMKPLLDYLL ALNYRGEKLM
201: ISDSLDTADK LQTALLLAEV FVASLEKSTP YQQFEQKFQE WGLEKGWGDT AETCRETLNF LSEVLQAPDP INMEKFFSRV PSVFNIVIFS IHGYFGQEKV
301: LGLPDTGGQV VYILDQVRAL EEELLQRIKR QGLNVTPKIL VLTRLIPDAK GTKCNVELEP VEHTKHSSIL RVPFKTDDGK DLRQWVSRFD IYPYLERYAK
401: DSSVKILDIL EGKPDMVIGN YTDGNLVASL LSSKLGVTQG TIAHALEKTK YEDSDVKWRE MDHKYHFSCQ FTADMIAMNT SDFIIASTYQ EIAGSKDKPG
501: QYESHYAFTM PGLCRYATGV NVFDPKFNIA APGADQTVYF PFTQKQARLT DLHPQIEELL YSKEDNDEHL GYLGDRSKPI IFSMARLDKV KNITGLVEWY
601: GENKKLRDLV NLVIVGGLLE PSQSNDREEI EEINKMHSLM DKYQLKGQIR WIKAQTERVR NGELYRCIAD TRGAFVQPAL YEAFGLTVIE AMNCGLPTFA
701: TNQGGPAEII VNEVSGFHIN PLNGKESSDK IAAFFQKCKE DPTYWNKMST AGLQRIYECY TWQIYATKVL NMGSMYGFWR TLNKEERQAK QLYLQMFYNL
801: LFRQLVKTVP KLGEQPAQPT TAPARIAPRP RERRPQTRIQ RIATSLLGPV LPTSNFSQDA A

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.