CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
plastid 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38924	Soybean	plastid	96.09	95.98
PGSC0003DMT400079728	Potato	cytosol	15.54	81.25
TraesCS4A01G492600.1	Wheat	cytosol	43.8	71.96
KRH17270	Soybean	cytosol	64.89	71.07
KRH72916	Soybean	cytosol	64.78	70.95
VIT_17s0053g00700.t01	Wine grape	cytosol	68.26	69.32
GSMUA_Achr9P21240_001	Banana	cytosol	63.48	69.19
KRH30890	Soybean	cytosol	63.26	68.88
GSMUA_Achr3P13980_001	Banana	cytosol	62.72	68.36
Solyc03g098290.2.1	Tomato	cytosol, nucleus	64.89	67.0
Os04t0249500-00	Rice	cytosol	61.41	66.94
TraesCS2D01G403600.1	Wheat	cytosol	62.83	66.74
Os04t0309600-01	Rice	cytosol, plasma membrane	61.2	66.71
TraesCS7B01G482200.1	Wheat	cytosol	62.39	66.67
TraesCS7A01G557600.1	Wheat	cytosol	62.39	66.67
TraesCS2B01G424300.1	Wheat	cytosol	62.5	66.55
TraesCS2A01G406700.1	Wheat	cytosol	62.5	66.55
TraesCS7D01G552800.1	Wheat	cytosol	62.28	66.55
Os02t0831500-01	Rice	plastid	60.98	66.31
HORVU7Hr1G120520.1	Barley	cytosol	61.96	66.05
TraesCSU01G082000.1	Wheat	plastid	61.96	65.67
HORVU6Hr1G094880.6	Barley	cytosol	61.41	65.62
TraesCS6D01G403800.1	Wheat	cytosol	61.41	65.17
TraesCS6B01G466600.1	Wheat	cytosol	61.41	65.09
OQU77175	Sorghum	plastid	63.15	64.77
Zm00001d051837_P002	Maize	cytosol	57.5	62.16
KXG31429	Sorghum	cytosol	58.26	62.11
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	48.7	55.65
Zm00001d050151_P001	Maize	cytosol	8.26	55.47
KRH68215	Soybean	cytosol, endoplasmic reticulum, nucleus	48.8	55.3
KRH19379	Soybean	cytosol	48.37	55.28
KRG96468	Soybean	cytosol, endoplasmic reticulum, nucleus	48.59	55.05
Zm00001d014119_P001	Maize	cytosol	9.13	54.9
KRH12615	Soybean	endoplasmic reticulum	47.5	54.22
KRH12090	Soybean	endoplasmic reticulum	47.07	53.99
KRH37557	Soybean	endoplasmic reticulum	47.17	53.58
KRH62455	Soybean	cytosol	13.04	15.44
KRH56446	Soybean	cytosol	17.17	15.24
KRH03629	Soybean	endoplasmic reticulum	17.28	15.01
KRH20178	Soybean	nucleus	17.07	14.83
KRH14493	Soybean	cytosol	17.07	14.77
KRG98934	Soybean	cytosol	16.74	14.62
KRH46034	Soybean	cytosol	16.63	14.5

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	EntrezGene:100783965	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000
EMBL:ACUP02010276	EnsemblPlantsGene:GLYMA_16G217200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	UniProt:I1MQL2	EnsemblPlants:KRH09470
ProteinID:KRH09470	ProteinID:KRH09470.1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF379
MetaCyc:PWY-3801	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	TMHMM:TMhelix
UniParc:UPI000233F1CD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:37414228..37419838

Molecular Weight (calculated)

103911.0 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.344

Length

920 amino acids

Sequence
(BLAST)

001: MASTAPNSAL KRSDSITDSM PEALKQSRFH MKRCFARFVA SGKRLMKQQH VMDDVEKTVE DKAERKKFLD GMLGYIFSCT QEAAVVPPYV AFAVRPNPGF
101: WEYIKVNADD LQVEGIEAVE YLKYKEMIFD EKWANDENAL ELDFGAIDFS TPQMVLSSSI GNGLNFTTKI LTSRLSGSSQ SINPLLDYLL SLNYQGENLM
201: IKDTLNTMPK LQQALKVAEA YVSALNKDTA YQKFEDRFKE WGFDKGWGNT AGRVKETMKL LSEVLESADP VKLESLFSRL PNMFNIVILS IHGYFGQADV
301: LGLPDTGGQV VYILDQVRAL EEELLHKIEL QGLDVKPQIL VVTRLIPDAK GTTCNQELEP VTNTKHSNIL RVPFYTDKGM LRQWVSRFDI YPYLERFSQD
401: ATAKIFDLME DKPDLIIGNY TDGNLVSSLM ASKLGVTQAT IAHALEKTKY EDSDAKWMAF DEKYHFSCQF TADIISMNAA DFIITSTYQE IAGSKQKPGQ
501: YETHTAFTMP GLCRAVSGIN VFDPKFNIAA PGADQSVYFP STAKEQRLTS FHPAIEELLY SKDDNEEHIG LLEDMKKPII FSMARLDKVK NLSGLVEWYA
601: RNKRLRSLVN LVVVGGFFNP AKSKDREETE EIKKMHFLMK EYNLKGQFRW IAAQTDRYRN SELYRCISDT KGAFVQPALY EAFGLTVIEA MNCGLPTFAT
701: NQGGPAEIIV DGVSGFHIDP YNGDESSDKI ADFFEKCKTD SQHWNRMSKA GLQRINECYT WKIYAKKVLN MGSIYGFWRR LNREQKLAKE RYIHMFYNLQ
801: FRNLAKQVPI PSETPQDPTQ MPKPSAPAPS RRSAAKARPK KVSEHWIVGA PLTLLTAAAT PKIKDHPTPS GEGVSEGTAT SEQSGGGGLF GLRWLVPIIA
901: FVCAIHYFLK NLDRLFTREQ

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.