CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051837_P002	Maize	cytosol	88.88	90.13
TraesCS4A01G492600.1	Wheat	cytosol	53.88	83.04
HORVU6Hr1G094880.6	Barley	cytosol	77.4	77.58
TraesCSU01G082000.1	Wheat	plastid	77.98	77.53
TraesCS6B01G466600.1	Wheat	cytosol	77.75	77.3
Os02t0831500-01	Rice	plastid	75.67	77.19
TraesCS6D01G403800.1	Wheat	cytosol	77.52	77.16
PGSC0003DMT400079728	Potato	cytosol	14.95	73.3
OQU77175	Sorghum	plastid	73.58	70.79
GSMUA_Achr9P21240_001	Banana	cytosol	67.21	68.72
GSMUA_Achr3P13980_001	Banana	cytosol	66.05	67.54
PGSC0003DMT400043117	Potato	cytosol	62.69	64.4
KRH72916	Soybean	cytosol	61.88	63.57
KRH17270	Soybean	cytosol	61.76	63.45
Solyc02g081300.2.1	Tomato	cytosol, nucleus	63.38	61.88
VIT_04s0079g00230.t01	Wine grape	cytosol	60.72	61.87
KRH30890	Soybean	cytosol	60.14	61.42
VIT_17s0053g00700.t01	Wine grape	cytosol	63.38	60.38
Bra039502.1-P	Field mustard	cytosol	58.4	60.22
AT5G37180.1	Thale cress	cytosol	58.05	59.86
CDY38565	Canola	cytosol	58.4	59.57
CDY26996	Canola	cytosol	58.17	59.34
Solyc03g098290.2.1	Tomato	cytosol, nucleus	60.37	58.47
KRH38924	Soybean	plastid	62.22	58.31
KRH09470	Soybean	cytosol, plastid	62.11	58.26
CDY71780	Canola	cytosol, extracellular	23.87	57.87
CDX96472	Canola	cytosol	60.49	55.83
CDX72985	Canola	cytosol	60.25	55.67
AT1G73370.1	Thale cress	cytosol	60.6	55.52
Bra015995.1-P	Field mustard	cytosol	60.6	55.46
Bra003845.1-P	Field mustard	cytosol	59.79	54.89
CDX68228	Canola	cytosol	59.68	54.79
CDY11107	Canola	cytosol	59.33	54.47
EER92301	Sorghum	cytosol	50.29	53.65
KXG19528	Sorghum	mitochondrion	48.55	52.24
OQU92441	Sorghum	cytosol	47.97	50.74
KXG29640	Sorghum	cytosol	18.08	16.18
EES04111	Sorghum	nucleus	19.93	15.91
KXG20466	Sorghum	cytosol	17.84	15.71
OQU78428	Sorghum	nucleus	18.77	15.14
KXG28137	Sorghum	cytosol	17.03	13.74

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	UniProt:A0A194YT59
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	EnsemblPlants:KXG31429
ProteinID:KXG31429	ProteinID:KXG31429.1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF546
MetaCyc:PWY-3801	EnsemblPlantsGene:SORBI_3004G357600	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470
UniParc:UPI0007F1CA25	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:68447123..68450931

Molecular Weight (calculated)

97704.4 Da

IEP (calculated)

8.235

GRAVY (calculated)

-0.348

Length

863 amino acids

Sequence
(BLAST)

001: MMRRSDSIAD MMPEALRQSR YHMKRCFQRF VSQGSRLMKQ QHLLEELHGG GSADNNKQLA ADGFLGHVIS CTHEAVVLPP YVALAVRRNP GVWEYITVHS
101: GDLTVQQITP SDYLKRKEIL FLYDNSSQLE VNLGALDLST PRLTLPCSIG NGMHLVSRFL SSRLGGGGGR TKNKALLDYL LALRYYRRRP GDQQQINNKL
201: LISDTLDTVG KLQAALLLAQ AFVSEQHPDT PYQQMAHRFQ EWGLEKGWGD TAEACGHTLA CLAEVLQAPD PASIHRFFSR VPSVFDVVIF SVHGYFGQHK
301: VLGMPDTGGQ VVYILDQVRA LEEELLQRIK GQGLTFTPNI LVLTRLIPEA KGTTCNVELE PIENTRHSSI LRVPFKTQDG QDLPHWVSRF DIYPYLERYA
401: QDSCAKILDI LGRKPDLVIG NYTDGNLVAY LVSRKLGVTQ GTIAHALEKT KYEDSDVKWR EMDHKYHFSC QFTADMIAMN TSDFIIASTY QEIAGSKDKP
501: GQYESHYAFT MPGLCRFATG INVFDPKFNI AAPGADQSVY FPFTLKHKRL TDLHPQIEAL VYGKEENDEH IGYLENRRKP VIFSMARLDK VKNITGLVEW
601: YGQDKRLRVL VNLVVVGGLL DPTQSKDREE IEEINKMHSL INKYQLKGQI RWIKAQTDRV RNGELYRCIA DTRGAFVQPA LYEAFGLTVI EAMNCGLPTF
701: ATNQGGPAEI IVDEVSGFHI NPLDGKEASN KIANFFQKCN EDPMYWNRMS TAGLQRIYEC YTWQIYATKV LNMGSMYGFW RTLDKEEKQA KQQYLQMFYN
801: LHFRKLANAV PKVGEQPEQA TAVPLPDRSA PRPKERRTQI RIQRIASNLL GPVLPASHLS DAA

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.